cluster # 7675

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Schistosoma mansoni
cluster # 7675 cluster # 7675 Sequences # 5 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7675#0 length = 903 sequences # 2
consensus_7675#1 length = 566 sequences # 1

consensus_7675#2 length = 470 sequences # 1
consensus_7675#3 length = 379 sequences # 1

consensusID : consensus_7675#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 903
fasta sequence

                              [TCAACCATTGATCAGTAGACAAATGGCTAAAAATATCATAGGTCATTCATTATATCAATTGGGTGTTATATTTTTCTTATTATTTTATGTTGATTTAATCATGGAAGTGGATAATGTATCGGGTATTACAATACATGAACCAACACAACATTATACTATTATATTTAATGCTTTGGTATTAATGACATTATTTAATGAATTTAATGCAAGAAAAATACATGGACAACGTAATGTATTTAGTGGTTTACATAGAAATCCATTATTTATTATCATTTGGTTTGTAACATTTTTATTACAAGCATTAATTATACAATTTGGTTCATATGCATTTAGTACAAAAGCATTAGAATTAGATCAATGGGCATGGTGTTTATTCTTTGGTGTTGGTGAACTTGTATGGGGTCAGGTTGTGAATACAGTACCGAATGCAATTATACCAAAATGTAAATGTCGTANACGTAAACGTNCAACAGTTGTCGGTGTTAATGAAAATGCAGCTGGTGAATATATTAAGGATGCGATTGAAGTCGGTGAAGTTGATGAAGAAGACGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTGGTGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTGTAAGTGGTCTTTCACGAAAGTAACTAACTAAATACTCCTTATGGGGGTTGTTTGTTTGTTTGTTTTCTTTATTTATTTTTAAAAGAAAAAGAGATTGCTTTGATGTTGTCCTCGTTGTTGTTGTTGTCGTTGTCGTTACTGTTATATATGATTATTGCGTTTGACAGCTTCTATTTAGTTTTCAACATTTTATTATCGCTGTGGTTGATATGTTCTTTTTTCTCCATTTATTTATGCATTTTTCCTT]

[+] EMBL CD137363             [TCAACCATTGATCAGTAGACAAATGGCTAAAAATATCATAGGTCATTCATTATATCAATTGGGTGTTATATTTTTCTTATTATTTTATGTTGATTTAATCATGGAAGTGGATAATGTATCGGGTATTACAATACATGAACCAACACAACATTATACTATTATATTTAATGCTTTGGTATTAATGACATTATTTAATGAATTTAATGCAAGAAAAATACATGGACAACGTAATGTATTTAGTGGTTTACATAGAAATCCATTATTTATTATCATTTGGTTTGTAACATTTTTATTACAAGCATTAATTATACAATTTGGTTCATATGCATTTAGTACAAAAGCATTAGAATTAGATCAATGGGCATGGTGTTTATTCTTTGGTGTTGGTGAACTTGTATGGGGTCAGGTTGTGAATACAGTACCGAATGCAATTATACCAAAATGTAAATGTCGTANACGTAAACGTNCAACAGTTGTCGGTGTTAATGAAAATGCA                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD083499             [                                                                                                                                                                                                                                                                                                                                                                                                                                      CGAGGGCCATTATACCAAAATGTAAATGTCGTAAACGTAAACGTCCAACAGTTGTCGGTGTTAATGAAAATGCAGCTGGTGAATATATTAAGGATGCGATTGAAGTCGGTGAAGTTGATGAAGAAGACGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTGGTGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTGTAAGTGGTCTTTCACGAAAGTAACTAACTAAATACTCCTTATGGGGGTTGTTTGTTTGTTTGTTTTCTTTATTTATTTTTAAAAGAAAAAGAGATTGCTTTGATGTTGTCCTCGTTGTTGTTGTTGTCGTTGTCGTTACTGTTATATATGATTATTGCGTTTGACAGCTTCTATTTAGTTTTCAACATTTTATTATCGCTGTGGTTGATATGTTCTTTTTTCTCCATTTATTTATGCATTTTTCCTT]




>consensus_7675#0
TCAACCATTGATCAGTAGACAAATGGCTAAAAATATCATAGGTCATTCATTATATCAATT
GGGTGTTATATTTTTCTTATTATTTTATGTTGATTTAATCATGGAAGTGGATAATGTATC
GGGTATTACAATACATGAACCAACACAACATTATACTATTATATTTAATGCTTTGGTATT
AATGACATTATTTAATGAATTTAATGCAAGAAAAATACATGGACAACGTAATGTATTTAG
TGGTTTACATAGAAATCCATTATTTATTATCATTTGGTTTGTAACATTTTTATTACAAGC
ATTAATTATACAATTTGGTTCATATGCATTTAGTACAAAAGCATTAGAATTAGATCAATG
GGCATGGTGTTTATTCTTTGGTGTTGGTGAACTTGTATGGGGTCAGGTTGTGAATACAGT
ACCGAATGCAATTATACCAAAATGTAAATGTCGTANACGTAAACGTNCAACAGTTGTCGG
TGTTAATGAAAATGCAGCTGGTGAATATATTAAGGATGCGATTGAAGTCGGTGAAGTTGA
TGAAGAAGACGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTGG
TGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTGTAAG
TGGTCTTTCACGAAAGTAACTAACTAAATACTCCTTATGGGGGTTGTTTGTTTGTTTGTT
TTCTTTATTTATTTTTAAAAGAAAAAGAGATTGCTTTGATGTTGTCCTCGTTGTTGTTGT
TGTCGTTGTCGTTACTGTTATATATGATTATTGCGTTTGACAGCTTCTATTTAGTTTTCA
ACATTTTATTATCGCTGTGGTTGATATGTTCTTTTTTCTCCATTTATTTATGCATTTTTC
CTT

consensusID : consensus_7675#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 566
fasta sequence

                              [ATATTAAGGATGCGATTGAAGTCGGTGAAGTTGATGAAGAAGAAGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTGGTGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTATGAAAGTGGTCGATGCATTCCGTATGGGACTTGGACCGCATATTGATTTGGAACATCGTAGAAGTATTGGTTCGTTGGCATTTAGACAACGTCAAAATTCCAGTATTGAGTATGTGGATGCTGATGCTCCGGATGAGTCTTAATTACATTTATCTGTGTTGAATACGCTTATGCGTATATGTTTGTATGGATGCATAAGCATCAGTATTGGCGTCAACGCTTGATATATATCATTAAATACTAAACAGAATTATACCTTTTGATCTGTACGTTACCCTTAATAGATAGTTGATCATATCAATTATTACAAAGACCTAAATGTATGCGAAATTTGTATTTCTTTCCTCCCTATACACAAAATCTCCCCCCCTCTCTCTCTCACACACACTTATATATATTTCCACACATAAGCCTGC]

[+] EMBL CD201832             [ATATTAAGGATGCGATTGAAGTCGGTGAAGTTGATGAAGAAGAAGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTGGTGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTATGAAAGTGGTCGATGCATTCCGTATGGGACTTGGACCGCATATTGATTTGGAACATCGTAGAAGTATTGGTTCGTTGGCATTTAGACAACGTCAAAATTCCAGTATTGAGTATGTGGATGCTGATGCTCCGGATGAGTCTTAATTACATTTATCTGTGTTGAATACGCTTATGCGTATATGTTTGTATGGATGCATAAGCATCAGTATTGGCGTCAACGCTTGATATATATCATTAAATACTAAACAGAATTATACCTTTTGATCTGTACGTTACCCTTAATAGATAGTTGATCATATCAATTATTACAAAGACCTAAATGTATGCGAAATTTGTATTTCTTTCCTCCCTATACACAAAATCTCCCCCCCTCTCTCTCTCACACACACTTATATATATTTCCACACATAAGCCTGC]




>consensus_7675#1
ATATTAAGGATGCGATTGAAGTCGGTGAAGTTGATGAAGAAGAAGAAGATGAAATCTCTC
CATTATCATTAGGTGGTGCTAATATGGGAATTGGTGGACGTATTTTATGGATTCGTGGTG
TAAATCGTATTCAAACACAGATGCAAGCTATGAAAGTGGTCGATGCATTCCGTATGGGAC
TTGGACCGCATATTGATTTGGAACATCGTAGAAGTATTGGTTCGTTGGCATTTAGACAAC
GTCAAAATTCCAGTATTGAGTATGTGGATGCTGATGCTCCGGATGAGTCTTAATTACATT
TATCTGTGTTGAATACGCTTATGCGTATATGTTTGTATGGATGCATAAGCATCAGTATTG
GCGTCAACGCTTGATATATATCATTAAATACTAAACAGAATTATACCTTTTGATCTGTAC
GTTACCCTTAATAGATAGTTGATCATATCAATTATTACAAAGACCTAAATGTATGCGAAA
TTTGTATTTCTTTCCTCCCTATACACAAAATCTCCCCCCCTCTCTCTCTCACACACACTT
ATATATATTTCCACACATAAGCCTGC

consensusID : consensus_7675#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 470
fasta sequence

                              [TGTGTGGAAATATATATAAGTGTGTGTGAGAGAGAGAGGGGGGGAGATTTTGTGTATAGGGAGGAAAGAAATACAAATTTCGCATACATTTAGGTCTTTGTAATAATTGATATGATCAACTATCTATTAAGGGTAACGTACAGATCAAAAGGTATAATTCTGTTTAGTATTTAATGATATATATCAAGCGTTGACGCCAATACTGATGCTTATGCATCCATACAAACATATACGCATAAGCGTATTCAACACAGATAAATGTAATTAAGACTCATCCGGAGCATCAGCATCCACATACTCAATACTGGAATTTTGACGTTGTCTAAATGCCAACGAACCAATACTTCTACGATGTTCCAAATCAATATGCGGTCCAAGTCCCATACGGAATGCATCGACCACTTTCATCTGATGATAAGTAGGGTAGGTTTCACCAACATTATTGATTAGAAGCGAGTAGAGATGTAATA]

[+] EMBL CD195232             [TGTGTGGAAATATATATAAGTGTGTGTGAGAGAGAGAGGGGGGGAGATTTTGTGTATAGGGAGGAAAGAAATACAAATTTCGCATACATTTAGGTCTTTGTAATAATTGATATGATCAACTATCTATTAAGGGTAACGTACAGATCAAAAGGTATAATTCTGTTTAGTATTTAATGATATATATCAAGCGTTGACGCCAATACTGATGCTTATGCATCCATACAAACATATACGCATAAGCGTATTCAACACAGATAAATGTAATTAAGACTCATCCGGAGCATCAGCATCCACATACTCAATACTGGAATTTTGACGTTGTCTAAATGCCAACGAACCAATACTTCTACGATGTTCCAAATCAATATGCGGTCCAAGTCCCATACGGAATGCATCGACCACTTTCATCTGATGATAAGTAGGGTAGGTTTCACCAACATTATTGATTAGAAGCGAGTAGAGATGTAATA]




>consensus_7675#2
TGTGTGGAAATATATATAAGTGTGTGTGAGAGAGAGAGGGGGGGAGATTTTGTGTATAGG
GAGGAAAGAAATACAAATTTCGCATACATTTAGGTCTTTGTAATAATTGATATGATCAAC
TATCTATTAAGGGTAACGTACAGATCAAAAGGTATAATTCTGTTTAGTATTTAATGATAT
ATATCAAGCGTTGACGCCAATACTGATGCTTATGCATCCATACAAACATATACGCATAAG
CGTATTCAACACAGATAAATGTAATTAAGACTCATCCGGAGCATCAGCATCCACATACTC
AATACTGGAATTTTGACGTTGTCTAAATGCCAACGAACCAATACTTCTACGATGTTCCAA
ATCAATATGCGGTCCAAGTCCCATACGGAATGCATCGACCACTTTCATCTGATGATAAGT
AGGGTAGGTTTCACCAACATTATTGATTAGAAGCGAGTAGAGATGTAATA

consensusID : consensus_7675#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 379
fasta sequence

                              [CAGCTGGTGAATATATTAAGGATGCGATTGAAGTCGGTGAAGTTGATGAAGAAGAAGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTGGTGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTGTTTCATAATATATTTTTGATTGAGATCATGAATTGATCAATATTAGACCACCATTGAAAACTTGGAAGCACTGGACTACCGCAACTATCTTCCATTATCTTCGATGAAAGTGGTCGATGCATTCCGTATGGGACTTGGACCGCATATTGATTTGGAACATCGTAGAAGTATTGGTTCGTTGGCATTTAGACAACGTCAAAATTCCAGTATTGAGTAT]

[+] EMBL CD064057             [CAGCTGGTGAATATATTAAGGATGCGATTGAAGTCGGTGAAGTTGATGAAGAAGAAGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTGGTGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTGTTTCATAATATATTTTTGATTGAGATCATGAATTGATCAATATTAGACCACCATTGAAAACTTGGAAGCACTGGACTACCGCAACTATCTTCCATTATCTTCGATGAAAGTGGTCGATGCATTCCGTATGGGACTTGGACCGCATATTGATTTGGAACATCGTAGAAGTATTGGTTCGTTGGCATTTAGACAACGTCAAAATTCCAGTATTGAGTAT]




>consensus_7675#3
CAGCTGGTGAATATATTAAGGATGCGATTGAAGTCGGTGAAGTTGATGAAGAAGAAGAAG
ATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTGGTGGACGTATTTTAT
GGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTGTTTCATAATATATTTTTG
ATTGAGATCATGAATTGATCAATATTAGACCACCATTGAAAACTTGGAAGCACTGGACTA
CCGCAACTATCTTCCATTATCTTCGATGAAAGTGGTCGATGCATTCCGTATGGGACTTGG
ACCGCATATTGATTTGGAACATCGTAGAAGTATTGGTTCGTTGGCATTTAGACAACGTCA
AAATTCCAGTATTGAGTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7675#1      ------------------------------------------------------------
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      TCAACCATTGATCAGTAGACAAATGGCTAAAAATATCATAGGTCATTCATTATATCAATT 60
consensus_7675#2      ------------------------------------------------------------
                                                                                  

consensus_7675#1      ------------------------------------------------------------
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      GGGTGTTATATTTTTCTTATTATTTTATGTTGATTTAATCATGGAAGTGGATAATGTATC 120
consensus_7675#2      ------------------------------------------------------------
                                                                                  

consensus_7675#1      ------------------------------------------------------------
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      GGGTATTACAATACATGAACCAACACAACATTATACTATTATATTTAATGCTTTGGTATT 180
consensus_7675#2      ------------------------------------------------------------
                                                                                  

consensus_7675#1      ------------------------------------------------------------
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      AATGACATTATTTAATGAATTTAATGCAAGAAAAATACATGGACAACGTAATGTATTTAG 240
consensus_7675#2      ------------------------------------------------------------
                                                                                  

consensus_7675#1      ------------------------------------------------------------
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      TGGTTTACATAGAAATCCATTATTTATTATCATTTGGTTTGTAACATTTTTATTACAAGC 300
consensus_7675#2      ------------------------------------------------------------
                                                                                  

consensus_7675#1      ------------------------------------------------------------
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      ATTAATTATACAATTTGGTTCATATGCATTTAGTACAAAAGCATTAGAATTAGATCAATG 360
consensus_7675#2      ------------------------------------------------------------
                                                                                  

consensus_7675#1      ------------------------------------------------------------
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      GGCATGGTGTTTATTCTTTGGTGTTGGTGAACTTGTATGGGGTCAGGTTGTGAATACAGT 420
consensus_7675#2      ------------------------------------------------------------
                                                                                  

consensus_7675#1      ------------------------------------------------------------
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      ACCGAATGCAATTATACCAAAATGTAAATGTCGTANACGTAAACGTNCAACAGTTGTCGG 480
consensus_7675#2      ------------------------------------------------------------
                                                                                  

consensus_7675#1      --------------------------ATAT-TAAGGATGCGATTGAAGTCGGTGAAGTTG 33
consensus_7675#3      --------------CAGCTGGTGAATATAT-TAAGGATGCGATTGAAGTCGGTGAAGTTG 45
consensus_7675#0      TGTTAATGAAAATGCAGCTGGTGAATATAT-TAAGGATGCGATTGAAGTCGGTGAAGTTG 539
consensus_7675#2      -----TGTGTGGAAATATATATAAGTGTGTGTGAGAGAGAGAGGGGGGGAGATTTTGTGT 55
                                                 * * * **   * **  *  *  * *   **  

consensus_7675#1      ATGAAGAAGAAGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTG 93
consensus_7675#3      ATGAAGAAGAAGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTG 105
consensus_7675#0      ATGAAGAAGACGAAGATGAAATCTCTCCATTATCATTAGGTGGTGCTAATATGGGAATTG 599
consensus_7675#2      ATAGGGAGGAAAGAAATACAAATTTCGCAT-ACATTTAGGTCTTTGTAATAATTGATATG 114
                      **   ** **   * **  **  *   *** *   ******  *  *****   **  **

consensus_7675#1      GTGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTATGA 153
consensus_7675#3      GTGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTGTTT 165
consensus_7675#0      GTGGACGTATTTTATGGATTCGTGGTGTAAATCGTATTCAAACACAGATGCAAGCTGT-- 657
consensus_7675#2      ATCAAC-TATCTATTAAGGGTAACGTACAGATCAAAAG-GTATAATTCTGTTTAGTATTT 172
                       *  ** *** *  *         **  * ***  *     * *    **     * *  

consensus_7675#1      AAGTGGTCGATGCATTCCGTATGGGACTTGGAC--CGCATATTGATTTGGAACATCGTAG 211
consensus_7675#3      CA-TAAT--ATATTTTTGATTGAGATCATGAAT--TGATCAATA--TTAGACCACCATTG 218
consensus_7675#0      AAGTGGT------CTTTCACGAAAGTAACTAAC--TAAATACTCCTTATGGGGGTTGTTT 709
consensus_7675#2      AA-TGATATATATCAAGCGTTGACGCCAATACTGATGCTTATGCATCCATACAAACATAT 231
                       * *  *                                 *                *  

consensus_7675#1      AAGTATTGGTTCGTTGGCATTTAGACAACGTCAAAATTCCAGTATTGAGTATGTGGATG- 270
consensus_7675#3      AAAACTTGGAAGCACTGGACT---ACCGCAACTATCTTCCATTATCTTCGATGAAAGTGG 275
consensus_7675#0      GTTTGTTTGTTTTCTTTATTTATTTTTAAAAGAAAAAGAGATTGCTTTG-ATGTTGTCC- 767
consensus_7675#2      ACGCATAAGC-GTATTCAACACAGATAAATGTAATTAAGACTCATCCGGAGCATCAGCA- 289
                           *  *                        *                          

consensus_7675#1      CTGATGC--TCCGGATGAGTCTTAATTACATTTATCTGTGTTGAATACGCTTATGCGTAT 328
consensus_7675#3      TCGATGCATTCCGTATGGGACTTGGAC-CGCATATTGATTTGGAACAT-CGTAGAAGTAT 333
consensus_7675#0      TCGTTGTTGTTGTTGTC-GTTGTCGTTACTGTTATATATGATTATTGCGTTTGACAGCTT 826
consensus_7675#2      TCCACATACTCAATACTGGAATTT-TGACGTTGTCTAAATGCCAACGAACCAATACTTCT 348
                               *        *   *     *              *               *

consensus_7675#1      ATGTTTGTATGGATGCATA-AGCATCAGTATTGGCGTCAACGCTTGATATATATCATTAA 387
consensus_7675#3      TGGTTCGTTGGCATTTAGACAACGTCAAAATT----CCAGTATTGAGTAT---------- 379
consensus_7675#0      CTATTTA-----GTTTTCAACATTTTATTATCG----CTGTGGTTGATATGTTCTTTT-- 875
consensus_7675#2      ACGATGTTCCAAATCAATATGCGGTCCAAGTCC---CATACGGAATGCATCGACCACTTT 405
                          *        *    *     *     *                 **          

consensus_7675#1      ATACTAAACAGAATTATACCTTTTGATCTGTACGTTACCCTTAATAGATAGTTGATCATA 447
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      -TTCTCCATTTATTTATGCATTTTTCCTT------------------------------- 903
consensus_7675#2      CATCTGATGATAAGTAGGGTAGGTTTCACCAACATTATTGATTAGAAGCGAGTAGAGATG 465
                                                                                  

consensus_7675#1      TCAATTATTACAAAGACCTAAATGTATGCGAAATTTGTATTTCTTTCCTCCCTATACACA 507
consensus_7675#3      ------------------------------------------------------------
consensus_7675#0      ------------------------------------------------------------
consensus_7675#2      TAATA------------------------------------------------------- 470
                                                                                  

consensus_7675#1      AAATCTCCCCCCCTCTCTCTCTCACACACACTTATATATATTTCCACACATAAGCCTGC 566
consensus_7675#3      -----------------------------------------------------------
consensus_7675#0      -----------------------------------------------------------
consensus_7675#2      -----------------------------------------------------------