cluster # 7681

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Schistosoma mansoni
cluster # 7681 cluster # 7681 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7681#0 length = 518 sequences # 5

consensusID : consensus_7681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 518
fasta sequence

                              [CAAGTTCCTATTCTGCAAGACAATTTACGTTATTTGTACGAAGAAAACGTACGCCTTCATGAGAAAGATGAAATT-AAGAGTCTCATCGACTTCAAAATGGTGGGCATATCGATAGCACTGATGAAGAAGTAGAAGAAATTGTTGAAGAGGAAGTCCGGACATATAAAAAGGCTCCTAAAACTGACCCTGTTGCTAATGATCTTCCTAGTCCAAACCACCTTGGTAACTTGAATAACGGGATTGATAAGAGCCAGTTCCCTTCGG-AATATTGGTCTAGATTAGAGTCTTACTTCTACAAACGCTTTTTATTGGAACGACCTTTTAGTCATAATATTGTCATGCAATCATCAGAAGGTAATAAACGCACCACAGCTACTATGGCTTGTCCTATTAAATCGTCCGGATTTAGATGCGTTGGTATTAATGTTTGTCCATCCATTCAGGAAGTTGGAGTTCTCTGTTCACGACCAGAAACACGCGAATTCGGCTGCCTTTTTTATGAAACCGAGTCGATGACT]

[+] EMBL CD193299             [CAAGTTCCTATTCTGCAAGACAATTTACGTTATTTGTACGAAGAAAACGTACGCCTTCATGAGAAAGATGAAATTAAAGAGTCTCATCGACTTCAAAATGGTGGGCATATCGATAGCACTGATGAAGAAGTAGAAGAAATTGTTGAAGAGGAAGTCCGGACA                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD166611             [                                                                    TGAAATT AAGAGTCTCATCGACTTCAAAATGGTGGGCATATCGATAGCACTGATGAAGAAGTAGAAGAAATTGTTGAAGAGGAAGTCCGGACATATAAAAAGGCTCCTAAAACTGACCCTGTTGCTAATGATCTTCCTAGTCCAAACCACCTTGGTAACTTGAATAACGGGATTGATAAGAGCCAGTTCCCTTCGG AATATTGGTCTAGATTAGAGTCTTACTTCTACAAACGCTTTTTATTGGAACGACCTTTTAGTCATAATATTGTCATGCAATCATCAGAAGGTAATAAACGCACCACAGCTACTATGGCTTGTCCTATTAAATCGTCCGGATTTAGATGCGTTGGTATTAATGTTTGTCCATCCATTCAGGAAGTTGGAGTTCTCTGTTCACGACCAGAAACACGCGAATTCGGCTGCCTTTTTTATGAAACCGAGTCGATGACT]
[-] EMBL CD064100             [                                                                                                                                                     GGAAGTCCGGACATATAAAAAGGCTCCTAAAACTGACCCTGTTGCTAATGATCTTCCTAGTCCAAACCACCTTGGTAACTTGAATAACGGGATTGATAAGAGCCAGTTCCCTTCGG AATATTGGTCTAGATTAGAGTGTTAGTTCTAC                                                                                                                                                                                                                              ]
[+] EMBL CD166556             [                                                                                                                                                                                                                       gCAGCTTGGTAACTTGAATAACGGGATTGATAAGAGCCAGTTCCCTTCGG AATATTGGTCTAGATTAGAGTCTTACTTCTACAAACGCTTTTTATTGGAACGACCTTTTAGTCATAATATTGTCATGCAATCATCAGAAGGTAATAAACGCACCACAGCTACTATGGCTTGTCCTATTAAATCGTCCGGATTTAGATGCGTTGGTATTAATGTTTGTCCATCCATTCAGGAAGTTGGAGTTCTCTGTTCACGACCAGAAACACGCGAATTCGGCTGCCTTTTTAATGA                ]
[+] EMBL CD166641             [                                                                                                                                                                                                                                             GGGATTGATTCGAGCCTGTTCCCTTCGGTAATATTGGTCTAGATTAGAGTCTTACTTCTACAAACGCTTTTTATTGGAACGACCTTTTAGTCATAATATTGTCATGCAATCATCAGAAGGTAATAAACGCACCACAGCTACTATGGCTTGTCCTATTAAATCGTCCGGATTTAGATGCGTTGGTATTAATGTTTGTCCATCCATTCAGGAAGTTGGAGTTCTCTGTTCACGA                                                   ]




>consensus_7681#0
CAAGTTCCTATTCTGCAAGACAATTTACGTTATTTGTACGAAGAAAACGTACGCCTTCAT
GAGAAAGATGAAATTAAGAGTCTCATCGACTTCAAAATGGTGGGCATATCGATAGCACTG
ATGAAGAAGTAGAAGAAATTGTTGAAGAGGAAGTCCGGACATATAAAAAGGCTCCTAAAA
CTGACCCTGTTGCTAATGATCTTCCTAGTCCAAACCACCTTGGTAACTTGAATAACGGGA
TTGATAAGAGCCAGTTCCCTTCGGAATATTGGTCTAGATTAGAGTCTTACTTCTACAAAC
GCTTTTTATTGGAACGACCTTTTAGTCATAATATTGTCATGCAATCATCAGAAGGTAATA
AACGCACCACAGCTACTATGGCTTGTCCTATTAAATCGTCCGGATTTAGATGCGTTGGTA
TTAATGTTTGTCCATCCATTCAGGAAGTTGGAGTTCTCTGTTCACGACCAGAAACACGCG
AATTCGGCTGCCTTTTTTATGAAACCGAGTCGATGACT

clustalw multiple alignements is not computed in this case