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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7688#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1102 fasta sequence
[TGTCGGAACAAAAGTCCGGACATTCACAAAAGCATTAAGACGTGAGCTTGGACCTGATTACGTATCTCCTGTTAAAGCTTATGGTAAACGGTTGGCAAGTCTAAACGCAACTGCCATCATAGGTGCTTTTAATTCTAAATCTCCCAGGAAAACATATGTTAGGAAAAAAAGGTCGGATGTATCATTTGAGTTGGGATTACCACCAACTTTGGTTCATTCAGATGAAGCAGATGATGCTATTACAGAGCCTATGTGTTCAGTCGTTGATGATGATTTAGTTCACTGTGTGGAGATTACCGATGCCCTAACTCCAGAACAAAGCAACGTACTGACAACGCACAAGTCCCCAAGTTGTACTCCTGCGAATGAAGCCACACCATCAACGTTTAAGAACGTTTGTCAAATTAACCCTGCAATCGAAAGTTTTCATTCACAACGAATTATACCGCTAGGACATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTTGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTGTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAATGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCTCCCGCCTCAGTACGTTAATACTTGGAATCCTACGTTACCGTGTATTTCAAATTCAAGTATCACACCATCCTTTGTTGCTTGTGCACCTCCAAATATTATTCTTCCCCACGTTGGCTCACCTTTTGTTGTTCCCAACCTTGGTGTTACGCCTCAGGTCGCATATCCACTTGTTTTACAATCGTTTCCCAATATCCCTGCATCTTATATAGGACCTAGTTTTCCCTGCGGAATTATCTCACCTGTTATTTTACCGACATCATGGGCTCAACCTAGCTTGCTACCTTGTCAACCTTTCAATGCCTCAGCTAGCAACAACAATGAACTCTTATGTCCTATGATGATCTCGTCCGCACAAATTATTTCANACACTCAACCACAACTTATTCAATTGCCAAGTAAT]
[-] EMBL CD155836 [TGTCGGAACAAAAGTCCGGACATTCACAAAAGCATTAAGACGTGAGCTTGGACCTGATTACGTATCTCCTGTTAAAGCTTATGGTAAACGGTTGGCAAGTCTAAACGCAACTGCCATCATAGGTGCTTTTAATTCTAAATCTCCCAGGAAAACATATGTTAGGAAAAAAAGGTCGGATGTATCATTTGAGTTGGGATTACCACCAACTTTGGTTCATTCAGATGAAGCAGATGATGCTATTACAGAGCCTATGTGTTCAGTCGTTGATGATGATTTAGTTCACTGTGTGGAGATTACCGATGCCCTAACTCCAGAACAAAGCAACGTACTGACAACGCACAAGTCCC ]
[+] EMBL CD200679 [ aGTCGGATGTATCATTTGAGTTGGGATTACCACCAACTTTGGTTCATTCAGATGAAGCAGATGATGCTATTACAGAGCCTATGTGTTCAGTCGTTGATGATGATTTAGTTCACTGTGTGGAGATTACCGATGCCCTAACTCCAGAACAAAGCAACGTACTGACAACGCACAAGTCCCCAAGTTGTACTCCTGCGAATGAAGCCACACCATCAACGTTTAAGAACGTTTGTCAAATTAACCCTGCAATCGAAAGTTTTCATTCACAACGAATTATACCGCTAGGACATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTTGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTTTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAATGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCGCCC ]
[+] EMBL CD192146 [ GTACTCCTGCGAATGAAGCCACACCATCAACGTTTAAGAACGTTTGTCAAATTAACCCTGCAATCGAAAGTTTTCATTCACAACGAATTATACCGCTAGGACATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTTGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTGTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAGTGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCTCCCGCCTCAGTACGTTAATACTTGGAATCCTACGTTACCGTGTATTTCAAATTCAAGTATCACACCATCCTTTGTTGCTTG ]
[+] EMBL CD117303 [ ATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTAGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTGTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAATGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCTCCCGCCTCAGTACGTTAATACTTGGAATCCTACGTTACCGTGTATTTCAAATTCAAGTATCACACCATCCTTTGTTGCTTGTGCACCTCCAAATATTATTCTTCCCCACGTTGGCTCACCTTTTGTTGTTCCCAACCTTGGTGTTACGCCTCAGGTCGCATATCCACTTGTTTTACAATCGTTTCCCAATATCCCTGCATCTTATATAGGACCTAGTTTTCCCTGCGGAATTATCTCACCTGTTATTTTACCGACATCATGGGCTCAACCTAGCTTGCTACCTTGTCAACCTTTCAATGCCTCAGCTAGCAACAACAATGAACTCTTATGTCCTATGATGATCTCGTCCGCACAAATTATTTCANACACTCAACCACAACTTATTCAATTGCCAAGTAAT]
[+] EMBL CD116843 [ ATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTTGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTGTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAATGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCTCCCGCCTCAGTACGTTAATACTTGGAATCCTACGTTACCGTGTATTTCAAATTCAAGTATCACACCATCCTTTGTTGCTTGTGCACCTCCAAATATTATTCTTCCCCACGTTGGCTCACCTTTTGTTGTTCCCAACCTTGGTGTTACGCCTCAGGTCGCATATCCACTTGTTTTACAATCGTTTCCCAATATCCCTGCATCTTATATAGGACCTAGTTTTCCCTGCGGAATTATCTCACCTGTTATTTTACCGACATCATGGGCTCAACCTAGCTTGCTACCTTGTCAACCTTTCAATGCCTCAGCTAGCAACAAacat ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||