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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7698 cluster # 7698       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7698#0 length = 1166 sequences # 5  

consensusID : consensus_7698#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1166
fasta sequence
                              [TGCTTTTGGACTCAATTTTACTGGTGGTGGCCCACTTACTGGCAACAACAATGTGATGGGTCTTTAATAAACAAAGAAATCAGTCTGGTTCCAGTCTTCTCCAAATCTCACCAATGAGTTCTATCAACGGTGTAGATGGAAAGGAAGAAGATAGTTCAGTCGAGCGTCCTTTCCAGTGTATGACATG-TCAAGAAGTTTTTCTGTCAAGGCGGGTTTAGTACAACATATGCGCACACACACAGACGAGCGGCCATATCCATGCATTCACTGTGGAAGAGCTTTTAAGCAAAAAATTCAGCTCACCACACATATGCGTGTACATAGTGGTGAGCGTCCTTATGGTTGCCGTTTATGTGGGAAATTGTTCAGGCAGCAAAGTCATGTGGTTCAACACCTACGAACTCATACAGGAGAAAAGCCACATAAATGCTATCAATGCGGTAAAGCTTTTCGTCAAAAATACAGCCTTATTTCCCATCAGCGTCGCATGTGTCGCAATCGCTCCGCTTCTAACCCTATTGCAGCAGGAATGACCATGTGGATAAGTCCAGGAGTAGATGGCGATACTGGTAATCTCATTAAGGAA-TTCTCCCCTAACAAAGGCAATTCGTCGATTGCAAGTCCGAATGCCTCATTGTCAACTCCGATCTCAGTTATGACGTCTCTCCAATCACCCCCATCTCCTTTCCCTTCCTCACCTGTGTCTAATACTCACGCACTTCCACAAAACCAGTTTCAAACTCCAGTTAACATAAACGGTGATTCACATCGGGAAAATCCAGTTGCAACGAGATCCCGTTGCAATTCTCTGTCAAAGAGCAAGTATGAATTACACGATTGGTCTCGTTCTCTTTCAAGGCATCCATCACGTCTCACATCAGAAGATGATTCTATCCATAGTCCTAGAAATTCAAGGTCCGGCGCATTGCAAGGTCATGCCCCAATGGGACTTACTTAATAGAAGTCATGAAGACTCGTAATTCATAATGATTTAGAATACATATAATTTAATTTTTTTTGTCGAATTATCAACATTTTATATTAATAATGATCTGTTTTACATAATTTTACTAAACCTACAGCTGTTATATGCCAAAGACCAAAATAAAGCACATATTGGATGCCATGAATTTCGCCTTTTTAAAAGATTGTTGAGGCACCTACTC]

[+] EMBL CD164801             [TGCTTTTGGACTCAATTTTACTGGTGGTGGCCCACTTACTGGCAACAACAATGTGATGGGTCTTTAATAAACAAAGAAATCAGTCTGGTTCCAGTCTTCTCCAAATCTCACCAATGAGTTCTATCAACGGTGTAGATGGAAAGGAAGAAGATAGTTCAGTCGAGCGTCCTTTCCAGTGTATGACATGTTCAAGAAGTTTTTCTGTCAAGGCGGGTTTAGTACAACATATGCGCACACACACAGACGAGCGGCCATATCCATGCATTCACTGTGGAAGAGCTTTTAAGCAAAAAATTCAGCTCACCACACATATGCGTGTACATAGTGGTGAGCGTCCTTATGGTTGCCGTTTATGTGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD178946             [                                                                                                                                                                   GCGTCCTTTCCAGTGTATGACATG TCAAGAAGTTTTTCTGTCAAGGCGGGTTTAGTACAACATATGCGCACACACACAGACGAGCGGCCATATCCATGCATTCACTGTGGAAGAGCTTTTAAGCAAAAAATTCAGCTCACCACACATATGCGTGTACATAGTGGTGAGCGTCCTTATGGTTGCCGTTTATGTGGGAAATTGTTCAGGCAGCAAAGTCATGTGGTTCAACACCTACGAACTCATACAGGAGAAAAGCCACATAAATGCTATCAATGCGGTAAAGCTTTTCGTCAAAAATACAGCCTTATTTCCCATCAGCGTCGCATGTGTCGCAATCGCTCCGCTTCTAACCCTATTGCAGCAGGAATGACCATGTGGATAAGCCCAGGAGTAGATGGCGATACTGGTAATCTCATTAAGGAA TTCTCCCCTAACAAAGGCAATTCGTCGATTGCAAGTCCGAATGCCTCATTGTCAACTCCGATCTCAGTTATGACGTCTCTCCAATCACCCCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD182626             [                                                                                                                                                                                                                                                              TATCCATGCATTCACTGTGGAAGAGCTTTTAAGCAAAAAATTCAGCTCACCACACATATGCGTGTACATAGTGGTGAGCGTCCTTATGGTTGCCGTTTATGTGGGAAATTGTTCAGGCAGCAAAGTCATGTGGTTCAACACCTACGAACTCATACAGGAGAAAAGCCACATAAATGCTATCAATGCGGTAAAGCTTTTCGTCAAAAATACAGCCTTATTTCCCATCAGCGTCGCATGTGTCGCAATCGCTCCGCTTCTAACCCTATTGCAGCAGGAATGACCATGTGGATAAGTCCAGGAGTAGATGGCGATACTGGTAATCTCATTAAGGAATTTCT CCCTAAC AAGGCAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BG932633             [                                                                                                                                                                                                                                                                                                                                                                                    AGCAAAGTCATGTGGTTCAACACCTACGAACTCATACAGGAGAAAAGCCACATAAATGCTATCAATGCGGTAAAGCTTTTCGTCAAAAATACAGCCTTATTACCCATCAGCGTCGCATGTGTCGCAATCGCTCCGCTTCTAACCCTATTGCAGCAGGAATGACCATGTGGATAAGTCCAGGAGTAGATGGCGATACTGGTAATCTCATTAAGGAA TTCgtgcag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD116740             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGTCCAGGAGTAGATGGCGATACTGGTAAACTCATTATGGAA TTCTCCCCTAACAAAGGCAATTCGTCGATTGCAAGTCCGAATGCCTCATTGTCAACTCCGATCTCAGTTATGACGTCTCTCCAATCACCCCCATCTCCTTTCCCTTCCTCACCTGTGTCTAATACTCACGCACTTCCACAAAACCAGTTTCAAACTCCAGTTAACATAAACGGTGATTCACATCGGGAAAATCCAGTTGCAACGAGATCCCGTTGCAATTCTCTGTCAAAGAGCAAGTATGAATTACACGATTGGTCTCGTTCTCTTTCAAGGCATCCATCACGTCTCACATCAGAAGATGATTCTATCCATAGTCCTAGAAATTCAAGGTCCGGCGCATTGCAAGGTCATGCCCCAATGGGACTTACTTAATAGAAGTCATGAAGACTCGTAATTCATAATGATTTAGAATACATATAATTTAATTTTTTTTGTCGAATTATCAACATTTTATATTAATAATGATCTGTTTTACATAATTTTACTAAACCTACAGCTGTTATATGCCAAAGACCAAAATAAAGCACATATTGGATGCCATGAATTTCGCCTTTTTAAAAGATTGTTGAGGCACCTACTC]


>consensus_7698#0 TGCTTTTGGACTCAATTTTACTGGTGGTGGCCCACTTACTGGCAACAACAATGTGATGGG TCTTTAATAAACAAAGAAATCAGTCTGGTTCCAGTCTTCTCCAAATCTCACCAATGAGTT CTATCAACGGTGTAGATGGAAAGGAAGAAGATAGTTCAGTCGAGCGTCCTTTCCAGTGTA TGACATGTCAAGAAGTTTTTCTGTCAAGGCGGGTTTAGTACAACATATGCGCACACACAC AGACGAGCGGCCATATCCATGCATTCACTGTGGAAGAGCTTTTAAGCAAAAAATTCAGCT CACCACACATATGCGTGTACATAGTGGTGAGCGTCCTTATGGTTGCCGTTTATGTGGGAA ATTGTTCAGGCAGCAAAGTCATGTGGTTCAACACCTACGAACTCATACAGGAGAAAAGCC ACATAAATGCTATCAATGCGGTAAAGCTTTTCGTCAAAAATACAGCCTTATTTCCCATCA GCGTCGCATGTGTCGCAATCGCTCCGCTTCTAACCCTATTGCAGCAGGAATGACCATGTG GATAAGTCCAGGAGTAGATGGCGATACTGGTAATCTCATTAAGGAATTCTCCCCTAACAA AGGCAATTCGTCGATTGCAAGTCCGAATGCCTCATTGTCAACTCCGATCTCAGTTATGAC GTCTCTCCAATCACCCCCATCTCCTTTCCCTTCCTCACCTGTGTCTAATACTCACGCACT TCCACAAAACCAGTTTCAAACTCCAGTTAACATAAACGGTGATTCACATCGGGAAAATCC AGTTGCAACGAGATCCCGTTGCAATTCTCTGTCAAAGAGCAAGTATGAATTACACGATTG GTCTCGTTCTCTTTCAAGGCATCCATCACGTCTCACATCAGAAGATGATTCTATCCATAG TCCTAGAAATTCAAGGTCCGGCGCATTGCAAGGTCATGCCCCAATGGGACTTACTTAATA GAAGTCATGAAGACTCGTAATTCATAATGATTTAGAATACATATAATTTAATTTTTTTTG TCGAATTATCAACATTTTATATTAATAATGATCTGTTTTACATAATTTTACTAAACCTAC AGCTGTTATATGCCAAAGACCAAAATAAAGCACATATTGGATGCCATGAATTTCGCCTTT TTAAAAGATTGTTGAGGCACCTACTC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)