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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7786 cluster # 7786       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7786#0 length = 733 sequences # 5  

consensusID : consensus_7786#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 733
fasta sequence
                              [TTTGAAAAGGCTCTAACTTTTTTACCGTGACACCGTAG-AATACACCGCCGTGGG-AGGCGTTAACTATTTATTGACATAAATATCCAGTCGCATGTCGAAACGCTCTGGCTTAGGTGTGATCACCAGCGAAGAGTTATCAAAACCTTTGAAATTGTCAAAACCATCTTTGGACAGTGATGAAGAAGACTATAACGATAAAGATTGTTTCCGATTACATGAAGCGGATATAGATGGTCAGGAAGCTACGACTTTAGAGTATGATGATGAAGTTAAAATAACTCCATTTAACATGAAAGAAGAGCTTGAGGAAGACGGACACTTCGACTCCGCTGGCACTTTCATTTTCAAGAAACAAGTTGATGCTCGTGATAACTGGTTAGAAGATATTAATTGGCTGGAAGTCAAGAAAAATCAAGAAAAGAATTCGTTGAAAGACACATCGATAAGCGATGAACTTGGTGGAAAAGTGCTAAGTAAAGAGGAGAAACTTACTTTGTACCAAGAACTCCTATCTTATTTGCAACCTTCTGAGACCGTTCTGCGCAGTATTAGACGTATGGGTGCCTGTTCAGATTCTAAAAAGTCCGCTTCAGCCAGTCAGCGCTGGCTAAAAAATAAAAATCCGAAAACTGCAGCTCAGACTGGCGATCCAGAAGGATTGATTCGTGGTACTGAATTAACTGATCAGCTTGTTCAAGGCGGAGATTTCGATGTTTATCAAAAAACATTCCAT]

[+] EMBL CD079177             [TTTGAAAAGGCTCTAACTTTTTTACCGTGCCACCGTAG AATACACCGCCGTGGG AGGCGTTAACTATTTATTAACATAAATATCCAGTCACATGTCGAAACGCTCTGGCTTAGGTGTGATCACCAGCGAAGAGTTATCAAGACCTTTGAAATTGTCAAAACCATCTTTGGACAGTGATGAAGAAGACTATAACGATAAAGATTGTTTCCGATTACATGAAGCGGATATAGATGGTCAGGAAGCTACGACTTTAGAGTATGATGATGAAGTTAAAATAACTCCATTTAACATGAAAGAAGAGCTTGAGGAAGACGGACACTTCGACTCCGCTGGCACTTTCATTTTCAAGAAACAAGTTGATGCTCGTGATAACTGGTTAGAAGATATTAATTGGCTGGAAGTCAAGAAAAATCAAGAAAAGAATTCGTTGAAAGACACATCGATAAGCGATGAACTTGGTGGAAAAGTGCTAAGTAAAGAGGAGAAACTTACTTTGTACCAAGAACTCCTATCTTATTTGCAACCTTCTGAGACCGTTCTGCGCAGTATTAGACGTATGGGTGCCTGTTCAGATTCTAAAAAGTCCGCTTCAGCCAGTCAGCGCT                                                                                                                                ]
[+] EMBL SMT14643             [                             ACACCGTAG AATACACCGCCGTGGG AGGCGTTAACTATTTATTGACATAAATATCCAGTCGCATGTCGAAACGCTCTGGCTTAGGTGTGATCACCAGCGAAGAGTTATCAAAACCTTTGAAATTGTCAAAACCATCTTTGGACAGTGATGAAGAAGACTATAACGATAAAGATTGTTTCCGATTACATGAAGCGGATATAGATGGTCAGGAAGCTACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL SMT14582             [                           acgcaggGTAGNAATACACCGCCGTGGGAAGGCGTTAACTATTTATTGACATAAATATCCNGTCGCATGTCGAAACGCTCTGGCTTAGGTGTNATCACCAGCGAAGAGTTATCAAAACCTTTNAAATTGTCAAAACCATCTTTGGACAGTAATGAAGAAGACTATAACGNTAAAGATTGTTTCCNATTACATGAAGCGGATATAGATGGTCAGGAAGCTACGACTTTAGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD065081             [                                                                                                                                                                                                                                                                                                                                                                                                                                 GAAAAGAATTCGTTGAATGACACATCGATAAGCGATGAACTTGGTGGAAAAGTGCTAAGTAAAGAGGAGAAACTTACTTTGTACCAAGAACTCCTATCTTATTTGCAACCTTCTGAGACCGTTCTGCGCAGTATTAGACGTATGGGTGCCTGTTCAGATTCTAAAAAGTCCGCTTCAGCCAGTCAGCGCTGGCTAAAAAATAAAAATCCGAAAACTGCAGCTCAGACTGGCGATCCAGAAGGATTGATTCGTGGTACTGAATTAACTGATCAGCTTGTTCAAGGCGGAGATTTCGATGTTTATCAAAAAACATTCCAT]
[+] EMBL CD095529             [                                                                                                                                                                                                                                                                                                                                                                                                                                       AATTCGTTGAAAGACACATCGATAAGCGATGAACTTGGCGGAAAAGTGCTAAGTAAAGAGGAGAAACTTACTTTGTACCAAGAACTCCTATCTTATTTGCAACCTTCTGAGACCGTTCTGCGCAGTATTAGACGTATGGGTGCCTGTTCAG                                                                                                                                                                 ]


>consensus_7786#0 TTTGAAAAGGCTCTAACTTTTTTACCGTGACACCGTAGAATACACCGCCGTGGGAGGCGT TAACTATTTATTGACATAAATATCCAGTCGCATGTCGAAACGCTCTGGCTTAGGTGTGAT CACCAGCGAAGAGTTATCAAAACCTTTGAAATTGTCAAAACCATCTTTGGACAGTGATGA AGAAGACTATAACGATAAAGATTGTTTCCGATTACATGAAGCGGATATAGATGGTCAGGA AGCTACGACTTTAGAGTATGATGATGAAGTTAAAATAACTCCATTTAACATGAAAGAAGA GCTTGAGGAAGACGGACACTTCGACTCCGCTGGCACTTTCATTTTCAAGAAACAAGTTGA TGCTCGTGATAACTGGTTAGAAGATATTAATTGGCTGGAAGTCAAGAAAAATCAAGAAAA GAATTCGTTGAAAGACACATCGATAAGCGATGAACTTGGTGGAAAAGTGCTAAGTAAAGA GGAGAAACTTACTTTGTACCAAGAACTCCTATCTTATTTGCAACCTTCTGAGACCGTTCT GCGCAGTATTAGACGTATGGGTGCCTGTTCAGATTCTAAAAAGTCCGCTTCAGCCAGTCA GCGCTGGCTAAAAAATAAAAATCCGAAAACTGCAGCTCAGACTGGCGATCCAGAAGGATT GATTCGTGGTACTGAATTAACTGATCAGCTTGTTCAAGGCGGAGATTTCGATGTTTATCA AAAAACATTCCAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)