These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7786#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 733 fasta sequence [TTTGAAAAGGCTCTAACTTTTTTACCGTGACACCGTAG-AATACACCGCCGTGGG-AGGCGTTAACTATTTATTGACATAAATATCCAGTCGCATGTCGAAACGCTCTGGCTTAGGTGTGATCACCAGCGAAGAGTTATCAAAACCTTTGAAATTGTCAAAACCATCTTTGGACAGTGATGAAGAAGACTATAACGATAAAGATTGTTTCCGATTACATGAAGCGGATATAGATGGTCAGGAAGCTACGACTTTAGAGTATGATGATGAAGTTAAAATAACTCCATTTAACATGAAAGAAGAGCTTGAGGAAGACGGACACTTCGACTCCGCTGGCACTTTCATTTTCAAGAAACAAGTTGATGCTCGTGATAACTGGTTAGAAGATATTAATTGGCTGGAAGTCAAGAAAAATCAAGAAAAGAATTCGTTGAAAGACACATCGATAAGCGATGAACTTGGTGGAAAAGTGCTAAGTAAAGAGGAGAAACTTACTTTGTACCAAGAACTCCTATCTTATTTGCAACCTTCTGAGACCGTTCTGCGCAGTATTAGACGTATGGGTGCCTGTTCAGATTCTAAAAAGTCCGCTTCAGCCAGTCAGCGCTGGCTAAAAAATAAAAATCCGAAAACTGCAGCTCAGACTGGCGATCCAGAAGGATTGATTCGTGGTACTGAATTAACTGATCAGCTTGTTCAAGGCGGAGATTTCGATGTTTATCAAAAAACATTCCAT] [+] EMBL CD079177 [TTTGAAAAGGCTCTAACTTTTTTACCGTGCCACCGTAG AATACACCGCCGTGGG AGGCGTTAACTATTTATTAACATAAATATCCAGTCACATGTCGAAACGCTCTGGCTTAGGTGTGATCACCAGCGAAGAGTTATCAAGACCTTTGAAATTGTCAAAACCATCTTTGGACAGTGATGAAGAAGACTATAACGATAAAGATTGTTTCCGATTACATGAAGCGGATATAGATGGTCAGGAAGCTACGACTTTAGAGTATGATGATGAAGTTAAAATAACTCCATTTAACATGAAAGAAGAGCTTGAGGAAGACGGACACTTCGACTCCGCTGGCACTTTCATTTTCAAGAAACAAGTTGATGCTCGTGATAACTGGTTAGAAGATATTAATTGGCTGGAAGTCAAGAAAAATCAAGAAAAGAATTCGTTGAAAGACACATCGATAAGCGATGAACTTGGTGGAAAAGTGCTAAGTAAAGAGGAGAAACTTACTTTGTACCAAGAACTCCTATCTTATTTGCAACCTTCTGAGACCGTTCTGCGCAGTATTAGACGTATGGGTGCCTGTTCAGATTCTAAAAAGTCCGCTTCAGCCAGTCAGCGCT ] [+] EMBL SMT14643 [ ACACCGTAG AATACACCGCCGTGGG AGGCGTTAACTATTTATTGACATAAATATCCAGTCGCATGTCGAAACGCTCTGGCTTAGGTGTGATCACCAGCGAAGAGTTATCAAAACCTTTGAAATTGTCAAAACCATCTTTGGACAGTGATGAAGAAGACTATAACGATAAAGATTGTTTCCGATTACATGAAGCGGATATAGATGGTCAGGAAGCTACGA ] [+] EMBL SMT14582 [ acgcaggGTAGNAATACACCGCCGTGGGAAGGCGTTAACTATTTATTGACATAAATATCCNGTCGCATGTCGAAACGCTCTGGCTTAGGTGTNATCACCAGCGAAGAGTTATCAAAACCTTTNAAATTGTCAAAACCATCTTTGGACAGTAATGAAGAAGACTATAACGNTAAAGATTGTTTCCNATTACATGAAGCGGATATAGATGGTCAGGAAGCTACGACTTTAGAGT ] [+] EMBL CD065081 [ GAAAAGAATTCGTTGAATGACACATCGATAAGCGATGAACTTGGTGGAAAAGTGCTAAGTAAAGAGGAGAAACTTACTTTGTACCAAGAACTCCTATCTTATTTGCAACCTTCTGAGACCGTTCTGCGCAGTATTAGACGTATGGGTGCCTGTTCAGATTCTAAAAAGTCCGCTTCAGCCAGTCAGCGCTGGCTAAAAAATAAAAATCCGAAAACTGCAGCTCAGACTGGCGATCCAGAAGGATTGATTCGTGGTACTGAATTAACTGATCAGCTTGTTCAAGGCGGAGATTTCGATGTTTATCAAAAAACATTCCAT] [+] EMBL CD095529 [ AATTCGTTGAAAGACACATCGATAAGCGATGAACTTGGCGGAAAAGTGCTAAGTAAAGAGGAGAAACTTACTTTGTACCAAGAACTCCTATCTTATTTGCAACCTTCTGAGACCGTTCTGCGCAGTATTAGACGTATGGGTGCCTGTTCAG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||