These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7800#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 528 fasta sequence [CGCGGCCAGAATTCGGTACGAGGATCACCGGATCGTTGCCTCATCTTGGTGTGAGGTGCTCTCAAAAGGTGACATTATGAAATCAGAAGAACTAAGCCGCTTGAAAAGTTACTTTCTTAAAAATTCCCGTGTTAAGGATTTTTCTGGTTACGGGGGAAAAATACATACACTTGGGTGGAATTGCAGTGGGTCGAGGTTAGCATCTGGATC-ATCTGACAAGCTTGTAAATATATACTCATTAGAATCTACAAGATTAACAAAAGTACATAGTTTCCGAGGACATAACGAAAGCGTAGACCAACTTTGTTGGCACCCATCAGATAATGATGTAGTTGCAACTGTGGGTGCAGATAGTGCTATTCGTTTGTGGGACTGTCGGACCAAAAAAGATCCAATCACAGCACAATGTAAAGGAGAGAACATTAATTTGGCATGGTCACCGGATGCACGTTACATCGCTGTTGGTAGTAAAACAGATTTGGTTTCATGGTTTGATTTGCGTGCAGGATTCANAGTGGTACAGGCGGA] [+] EMBL CD078198 [CGCGGCCAGAATTCGGTACGAGGATCACCGGATCGTTGCCTCATCTTGGTGTGAGGTGCTCTCAAAAGGTGACATTATGAAATCAGAAGAACTAAGCCGCTTGAAAAGTTACTTTCTTAAAAATTCCCGTGTTAAGGATTTTTCTGGTTACGGNGGAAAAATACATACACTTGGGTGGAATTGCAGTGGGTCGAGGTTAGCATCTGGATC ATCTGACAAGCTTGTAAATATATACTCATTAGAATCTACAAGATTAACAAAAGTACATAGTTTCCGAGGACATAAC ] [+] EMBL CD201343 [ ATCACCGGATCGTTGCCTCATCTTGGTGTGAGGTGCTCTCAAAAGGTGACATTATGAAATCAGAAGAACTAAGCCGCTTGAAAAGTTACTTTCTTAAAAATTCCCGTGTTAAGGATTTTTCTGGTTACGGGGGAAAAATACATACACTTGGGTGGAATTGCAGTGGGTCGAGGTTAGCATCTGGATC ATCTGACAAGCTTGTAAATATATACTCATTAGAATCTACAAGATTAACAAAAGTACATAGTTTCCGAGGACATAACGAAAGCGTAGACCAACTTTGTTGGCACCCATCAGATAATGATGTAGTTGCAACTGTGGGTGCAGATAGTGCTATTCGTTTGTGGGACTGTCGGACCAAAAAAGATCCAATCACAGCACAATGTAAAGGAGAGAACATTAATTTGGCATGGTCACCGGATGCACGTTACATCGCTGTTGGTAGTAAAACAGATTTGGTTTCATGGTTTGATTTGCGTGCAGGATTCANAGTGGTACAGGCGGA] [+] EMBL CD201424 [ ATCACCGGATCGTTGCCTCATCTTGGTGTGAGGTGCTCTCAAAAGGTGACATTATGAAATCAGAAGAACTAAGCCGCTTGAAAAGTTACTTTCTTAAAAATTCCCGTGTTAAGGATTTTTCTGGTTACGGGGGAAAAATACATACACTTGGGTGGAATTGCAGTGGGTCGAGGTTAGCATCTGGATC ATCTGACAAGCTTGTAAATATATACTCATTAGAATCTACAAGATTAACAAAAGTACATAGTTTCCGAGGACATAACGAAAGCGTAGACCAACTTTGTTGGCACCCATCAGATAATGATGTAGTTGCAACTGTGGGTGCAGATAGTGCTATTCGTTTGTGGGACTGTCGGACCAAAAAAGATCCAATCACAGCACAATGTAAAGGAGAGAACATTAATTTGGCATGGTCACCGGATGCACGTTACATCGCTGTTGGTAGTAAAACAGATTTGGTTTCATGGTTTGATTTGCGTGCAGGATTCAAAGTGGTACAGGCGGA] [+] EMBL CD171402 [ TGCCTCATCTTGGTGTGAGGTGCTCTCAAATGGTGACATTATGAAATCAGAAGAACTAAGCCGCTTGAAAAGTTACTTTCTT AAAATTCCCGTGTTAAGGATTTTTCTGGTTACGGGGGAAAAAAACACACACTTGGGTGGAATTGCAGTGGGTCGAGGTTAGCATCTGGATCAATCTGACAAGCTTGTAAA ] [+] EMBL CD156437 [ GGGTCGAGGTTAGCATCTGGATC ATCTGACAAGCTTGTAAATATATACTCATTAGAATCTACAAGATTAACAAAAGTACATAGTTTCCGAGGACATAACGAAAGCGTAGACCAACTTTGTTGGCACCCATCAGATAATGATGTAGTTGCAACTGTGGGTGCAGATAGTGCTATTCGTTTGTGGGACTGTCGGACCAAAAAAGATCCAATCACAGCACAATGTAAAGGAGAGAACATTAATTTGGCATGGTCACCGGATGCACGTTAC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||