cluster # 787

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 787 cluster # 787 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_787#0 length = 246 sequences # 1

consensus_787#1 length = 142 sequences # 1

consensusID : consensus_787#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 246
fasta sequence

                              [TAATGCAGTGCAGGCATGCATTTATTTTTTTTTTTTTTTTTTTTTTAAACGTTCGCGTCATATATATATATATATATATATATATAATTTATCATAAAAATATGCAGCTCATAGTTAATTATTAAATGGCTAAAGACGTTGTGATGATATTTTTTAATGCAAGGTGCTTCCAGAACGATTCCATCTGTATTGATCTATTAATTTGGCTTGCTGCTCTGAGCTAACAGGGTGATAGTTCGACATCCG]

[+] EMBL AI975957             [TAATGCAGTGCAGGCATGCATTTATTTTTTTTTTTTTTTTTTTTTTAAACGTTCGCGTCATATATATATATATATATATATATATAATTTATCATAAAAATATGCAGCTCATAGTTAATTATTAAATGGCTAAAGACGTTGTGATGATATTTTTTAATGCAAGGTGCTTCCAGAACGATTCCATCTGTATTGATCTATTAATTTGGCTTGCTGCTCTGAGCTAACAGGGTGATAGTTCGACATCCG]




>consensus_787#0
TAATGCAGTGCAGGCATGCATTTATTTTTTTTTTTTTTTTTTTTTTAAACGTTCGCGTCA
TATATATATATATATATATATATATAATTTATCATAAAAATATGCAGCTCATAGTTAATT
ATTAAATGGCTAAAGACGTTGTGATGATATTTTTTAATGCAAGGTGCTTCCAGAACGATT
CCATCTGTATTGATCTATTAATTTGGCTTGCTGCTCTGAGCTAACAGGGTGATAGTTCGA
CATCCG

consensusID : consensus_787#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 142
fasta sequence

                              [GTCATATATATATATATATATATATATATAATTTATCATAAAAATATGCAGTACATTCCTAATTATTAAATGGCTAAAGACTTTGTGATAATATTTTTTAATGCAAGGTGCTTCCAAAACGAATCCATTTGTATTGATCTAT]

[+] EMBL AI975773             [GTCATATATATATATATATATATATATATAATTTATCATAAAAATATGCAGTACATTCCTAATTATTAAATGGCTAAAGACTTTGTGATAATATTTTTTAATGCAAGGTGCTTCCAAAACGAATCCATTTGTATTGATCTAT]




>consensus_787#1
GTCATATATATATATATATATATATATATAATTTATCATAAAAATATGCAGTACATTCCT
AATTATTAAATGGCTAAAGACTTTGTGATAATATTTTTTAATGCAAGGTGCTTCCAAAAC
GAATCCATTTGTATTGATCTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_787#0      TAATGCAGTGCAGGCATGCATTTATTTTTTTTTTTTTTTTTTTTTTAAACGTTCGCGTCA 60
consensus_787#1      --------------------------------------------------------GTCA 4
                                                                             ****

consensus_787#0      TATATATATATATATATATATATATAATTTATCATAAAAATATGCAGCTCATAGTTAATT 120
consensus_787#1      TATATATATATATATATATATATATAATTTATCATAAAAATATGCAGTACATTCCTAATT 64
                     ***********************************************  ***   *****

consensus_787#0      ATTAAATGGCTAAAGACGTTGTGATGATATTTTTTAATGCAAGGTGCTTCCAGAACGATT 180
consensus_787#1      ATTAAATGGCTAAAGACTTTGTGATAATATTTTTTAATGCAAGGTGCTTCCAAAACGAAT 124
                     ***************** ******* ************************** ***** *

consensus_787#0      CCATCTGTATTGATCTATTAATTTGGCTTGCTGCTCTGAGCTAACAGGGTGATAGTTCGA 240
consensus_787#1      CCATTTGTATTGATCTAT------------------------------------------ 142
                     **** *************                                          

consensus_787#0      CATCCG 246
consensus_787#1      ------