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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7919 cluster # 7919       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7919#0 length = 610 sequences # 6  

consensusID : consensus_7919#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 610
fasta sequence
                              [TTTCTGCATTCGATTCAAACGAGTCGAAGTATGGAAACTATGATCGTAATATTCGATCGAAATCCGATAATTTACTTGAGAATATTGATTTCACAACAGATCCGGGTCATTTTAGTCAAGGTGATCTGTATAGAAATAATAGTGTTTCACCAAAAAAACTTAATAGAAACGAATTTGAAAGGAACGAAGTAGTCAAAGATTCAGTTTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAGACCCTCCATGCAAGAAACTAAATTATTCAGTGAAACACATACAAATCTTGATAGTATTCCGACAAATCTATCTGATAATCATAATCATTACTATCGCAATTCTAAAAGAGGTACTATAGTATCAAATTGTTCATCTATTATGGAACAAAATAAAATACAATCAATTAAACCATCATTATTACCACAATCAAATACAATGATAAATAAATATAAATTAAATTTATATGATTCTTCAAGACGATCATCTTTAAAT-AAGAACATATCAATTCAGCTGGATCTCTTGAGAGTATGTTCACT]

[+] EMBL CD190832             [TTTCTGCATTCGATTCAAACGAGTCGAAGTATGGAAACTATGATCGTAATATTCGATCGAAATCCGATAATTTACTTGAGAATATTGATTTCACAACAGATCCGGGTCATTTTAGTCAAGGTGATCTGTATAGAAATAATAGTGTTTCACCAAAAAAACTTAATAGAAACGAATTTGAAAGGAACGAAGTAGTCAAAGATTCAGTTTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAa                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD157793             [                                                                                                                                                                            gttacgatGGAACGAAGTAGTCAAAGATTCAGTTTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAGACCCTCCATGCAAGAAACTAAATTATTCAGTGAAACACATACAAATCTTGATAGTATTCCGACAAATCTATCTGATAATCATAATCATTACTATCGCAATTCTAAAAGAGGTACTATAGTGTCAAATTGTTCATCTATTATGGAACAAAATAAAATACAATCAATTAAACCATCATTATTACCACAATCAAATACAATGATAAATAAATATAAATTAAATTTATATGATTCTTCAAGACGATCATCTTTAAAT AAGAACATATCAATTCAGCTGGATCTCTTGAGAGTATGTTCAC ]
[+] EMBL CD157557             [                                                                                                                                                                                           AGTAGTCAAAGATTCAGTTTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAGACCCTCCATGCAAGAAACTAAATTATTCAGTGAAACACATACAAATCTTGATAGTATTCCGACANATCTATCTGATAATCATAATCATTACTATCGCAATTCTAAAAGA GTAC                                                                                                                                                                                        ]
[+] EMBL CD157673             [                                                                                                                                                                                                  tAAGA TCAGTGTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAGACCCTCCATGCAAGAGACTAAATTATTCAGTGAAACACATACAAATCTTGATAGTATTCCGACAAATCTATCTGATAATCATAATCATTACTATCGCAATTCTAAAAGAGGTACTATAGTATCAAATTGTTCATCTATTATGGNAC                                                                                                                                                        ]
[-] EMBL CD157659             [                                                                                                                                                                                                                                                                                                                                                                                                                                   AGAGGTACTATAGTATCANATTGTTCATCTATTATGGAACAAAATAAAATACAATCAATTAAACCATCATTATTACCACAAACAAATACAATGATAAATAAATATAAATTAAATTTATATGATTCTTCAAGACGATCATCTTTAAATCAAGA                                        ]
[-] EMBL CD157584             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATGATAAATAAATATAAATTAAATTTATATGATTCTTCAAGACGATCATCTTTAAATCAAGACAATATCAATTCAGCTGGATCTCTTGAAAGTATGTTCACT]


>consensus_7919#0 TTTCTGCATTCGATTCAAACGAGTCGAAGTATGGAAACTATGATCGTAATATTCGATCGA AATCCGATAATTTACTTGAGAATATTGATTTCACAACAGATCCGGGTCATTTTAGTCAAG GTGATCTGTATAGAAATAATAGTGTTTCACCAAAAAAACTTAATAGAAACGAATTTGAAA GGAACGAAGTAGTCAAAGATTCAGTTTTTGAACAGCCAAGTACCATTGATAAAAGTTCAC CGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATG CTAATCTTTCTAGACCCTCCATGCAAGAAACTAAATTATTCAGTGAAACACATACAAATC TTGATAGTATTCCGACAAATCTATCTGATAATCATAATCATTACTATCGCAATTCTAAAA GAGGTACTATAGTATCAAATTGTTCATCTATTATGGAACAAAATAAAATACAATCAATTA AACCATCATTATTACCACAATCAAATACAATGATAAATAAATATAAATTAAATTTATATG ATTCTTCAAGACGATCATCTTTAAATAAGAACATATCAATTCAGCTGGATCTCTTGAGAG TATGTTCACT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)