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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7919#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 610 fasta sequence
[TTTCTGCATTCGATTCAAACGAGTCGAAGTATGGAAACTATGATCGTAATATTCGATCGAAATCCGATAATTTACTTGAGAATATTGATTTCACAACAGATCCGGGTCATTTTAGTCAAGGTGATCTGTATAGAAATAATAGTGTTTCACCAAAAAAACTTAATAGAAACGAATTTGAAAGGAACGAAGTAGTCAAAGATTCAGTTTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAGACCCTCCATGCAAGAAACTAAATTATTCAGTGAAACACATACAAATCTTGATAGTATTCCGACAAATCTATCTGATAATCATAATCATTACTATCGCAATTCTAAAAGAGGTACTATAGTATCAAATTGTTCATCTATTATGGAACAAAATAAAATACAATCAATTAAACCATCATTATTACCACAATCAAATACAATGATAAATAAATATAAATTAAATTTATATGATTCTTCAAGACGATCATCTTTAAAT-AAGAACATATCAATTCAGCTGGATCTCTTGAGAGTATGTTCACT]
[+] EMBL CD190832 [TTTCTGCATTCGATTCAAACGAGTCGAAGTATGGAAACTATGATCGTAATATTCGATCGAAATCCGATAATTTACTTGAGAATATTGATTTCACAACAGATCCGGGTCATTTTAGTCAAGGTGATCTGTATAGAAATAATAGTGTTTCACCAAAAAAACTTAATAGAAACGAATTTGAAAGGAACGAAGTAGTCAAAGATTCAGTTTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAa ]
[+] EMBL CD157793 [ gttacgatGGAACGAAGTAGTCAAAGATTCAGTTTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAGACCCTCCATGCAAGAAACTAAATTATTCAGTGAAACACATACAAATCTTGATAGTATTCCGACAAATCTATCTGATAATCATAATCATTACTATCGCAATTCTAAAAGAGGTACTATAGTGTCAAATTGTTCATCTATTATGGAACAAAATAAAATACAATCAATTAAACCATCATTATTACCACAATCAAATACAATGATAAATAAATATAAATTAAATTTATATGATTCTTCAAGACGATCATCTTTAAAT AAGAACATATCAATTCAGCTGGATCTCTTGAGAGTATGTTCAC ]
[+] EMBL CD157557 [ AGTAGTCAAAGATTCAGTTTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAGACCCTCCATGCAAGAAACTAAATTATTCAGTGAAACACATACAAATCTTGATAGTATTCCGACANATCTATCTGATAATCATAATCATTACTATCGCAATTCTAAAAGA GTAC ]
[+] EMBL CD157673 [ tAAGA TCAGTGTTTGAACAGCCAAGTACCATTGATAAAAGTTCACCGAAAAAACCATCTTCGTCATCTTTTGGTACTCGTGGACAAAATTCCGATGCCATATATGCTAATCTTTCTAGACCCTCCATGCAAGAGACTAAATTATTCAGTGAAACACATACAAATCTTGATAGTATTCCGACAAATCTATCTGATAATCATAATCATTACTATCGCAATTCTAAAAGAGGTACTATAGTATCAAATTGTTCATCTATTATGGNAC ]
[-] EMBL CD157659 [ AGAGGTACTATAGTATCANATTGTTCATCTATTATGGAACAAAATAAAATACAATCAATTAAACCATCATTATTACCACAAACAAATACAATGATAAATAAATATAAATTAAATTTATATGATTCTTCAAGACGATCATCTTTAAATCAAGA ]
[-] EMBL CD157584 [ AATGATAAATAAATATAAATTAAATTTATATGATTCTTCAAGACGATCATCTTTAAATCAAGACAATATCAATTCAGCTGGATCTCTTGAAAGTATGTTCACT]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||