cluster # 7940

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Schistosoma mansoni
cluster # 7940 cluster # 7940 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7940#0 length = 542 sequences # 6

consensusID : consensus_7940#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 542
fasta sequence

                              [CCTGGAAATCTTTATTCAAACTCAATTGGGAGTGAAAATACTTCTTCGAATTCCACAAACCTTTCTTTATCTTCGTCTTCACGTGGCGTTACTTTAGATCCTTCAGATTTCCCTCCAATTTTAACATCGACTGGGCGGAGTGGGAATTCTTCCACACCCTTTCATTCCTCGGCAAACCAGCCTCCCTTGCGGAACTATGTTTCTATTATGTCAAAAGGGTCTTCAACCATAGACCAGAGTTTGAATCAATTTAATCATTCTTCAAATAACCAGGCAGCTCCCCTGGAATTTTCTAAGCAGGATTT-CCCCGCTTTACCTGGTTCGCACCAACCTGCCACTAGCACTTCTACAACAGTGTCGACGACGAGTTCCTTAACTGTCAATTCAACATCTGCTCATCGTTCCTTGTCGGCTAGTTCCATAACTCANACTCCAGCTTCTACAAATTCTCGACGATTGTTTAGCCATACATCCAACCACGTTTTAGGACCATCATCAGTCCGTAATCAGCCGGGATATTCANATGTTCCTCCTAAATCTGT]

[+] EMBL CD158369             [CCTGGAAATCTTTATTCAAACTCAATTGGGAGTGAAAATACTTCTTCGAATTCCACAAACCTTTCTTTATCTTCGTCTTCACGTGGCGTTACTTTAGATCCTTCAGATTTCCCTCCAATTTTAACATCGACTGGGCGGAGTGGGAATTCTTCCACACCCTTTCATTCCTCGGCAAACCAGCCTCCCTTGCGGAACTATGTTTCTATTATGTCAAAAGGGTCTTCAACCATAGACCAGAGTTTGAATCAATTTAATCATTCTTCAAATAACCAGGCAGCTCCCCTGGAATTTTCTAAGCAGGATTT CCCCGCTTTACCTGGTTCGCACCAACCTGCCACTAGCACTTCTACAACAGTGTCGACGACGAGTTCCTTAACTGTCAATTCAACATCTGCTCATCGTTCCTTGTCGGCTAGTTCCATAACTCANACTCCAGCTTCTACAAATTCTCGACGATTGTTTAGCCATACATCCAACCACGTTTTAGGACCATCATCAGTCCGTAATCAGCCGGGATATTCANATGTTCCTCCTAAATCTGT]
[+] EMBL CD158435             [CCTGGAAATCTTTATTCAAACTCAATTGGGAGTGAAAATACTTCTTCGAATTCCACAAACCTTTCTTTATCTTCGTCTTCACGTGGCGTTACTTTAGATCCCTCAGATTTCCCTCCAATTTTAACATCGACTGGGCGGAGTGGGAATTCTTCCACACCCTTTCATTCCTCGGCAAACCAGCCTCCCTTGCGGAACTATGTTTCTATTATGTCAAAAGGGTCTTCAACCATAGACCAGAGTTTGAATCAATTTAATCATTCTTCAAATAACCAGGCAGCTCCCCTGGAATTTTCTAAGCAGGATTT CCCCGCTTTACCTGGTTCGCACCAACC                                                                                                                                                                                                                  ]
[-] EMBL CD158314             [ CTGGAAATCTTTATTCAAACTCAATTGGGAGTGAAAATACTTCTTCGAATTCCACAAACCTTTCTTTATCTTCGTCTTCACGTGGCGTTACTTTAGATCCTTCAGATTTCCCTCCAATTTTAACATCGACTGGGCGGAGTGGGAATTCTTCCACACCCTTTCATTCCTCGGCAAACCAGCCTCCCTTGCGGAACTATGTTTCTATTATGTCAAAAGGGTCTTCAACCATAGACCAGAGTTTGAATCAATTTAATCGTTCTTCAAATAACCAGGCAGCTCCCCTGGAATTTTCTAAGCAGGATTTCCCCCGCTTTACCTGGTTC                                                                                                                                                                                                                           ]
[-] EMBL CD120590             [ CTGGAAATCTTTATTCAAACTCAATTGGGAGTGAAAATACTTCTTCGAATTCCACAAACCTTTCTTTATCTTCGTCTTCACGTGGCGTTACTTTAGATCCTTCAGATTTCCCTCCAATTTTAACATCGACTGGGCGGAGTGGGAATTCTTCCACACCCTTTCATTCCTCGGCAAACCAGCCTCCCTTGCGGAACTATGTTTCTGTTATGTCAAAAGGGTCTTCAACCATAGACCAGAGTTTGAATCAATTTAATCATTCTTCAAATAACCAGGCAGCTCCCCTGGAATTTTCCAAGCAGGATTT CCCCGCTTTACCTGGTTC                                                                                                                                                                                                                           ]
[+] EMBL CD158523             [ CTGGAAATCTTTATTCAAACTCAATTGGGAGTGAAAATACTTCTTCGAATTCCACAAACCTTTCTTTATCTTCGTCTTCACGTGGCGTTACTTTAGATCCTTCAGATTTCCCTCCAATTTTAACATCGACTGGGCGGAGTGGGAATTCTTCCACACCCTTTCATTCC                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD158887             [ CTGGAAATCTTTATTCAAACTCAATTGGGAGTGAAAATACTTCTTCGAATTCCACAAACCTTTCTTTATCTTCGTCTTCACGTGGCGTTACTTTAGATCCTTCAGATTTCCCTCCAATTTTAACATCGACTGGGCGGAGTGGGAATTCTTCCACACCCTTTCATTCC                                                                                                                                                                                                                                                                                                                                                                                       ]




>consensus_7940#0
CCTGGAAATCTTTATTCAAACTCAATTGGGAGTGAAAATACTTCTTCGAATTCCACAAAC
CTTTCTTTATCTTCGTCTTCACGTGGCGTTACTTTAGATCCTTCAGATTTCCCTCCAATT
TTAACATCGACTGGGCGGAGTGGGAATTCTTCCACACCCTTTCATTCCTCGGCAAACCAG
CCTCCCTTGCGGAACTATGTTTCTATTATGTCAAAAGGGTCTTCAACCATAGACCAGAGT
TTGAATCAATTTAATCATTCTTCAAATAACCAGGCAGCTCCCCTGGAATTTTCTAAGCAG
GATTTCCCCGCTTTACCTGGTTCGCACCAACCTGCCACTAGCACTTCTACAACAGTGTCG
ACGACGAGTTCCTTAACTGTCAATTCAACATCTGCTCATCGTTCCTTGTCGGCTAGTTCC
ATAACTCANACTCCAGCTTCTACAAATTCTCGACGATTGTTTAGCCATACATCCAACCAC
GTTTTAGGACCATCATCAGTCCGTAATCAGCCGGGATATTCANATGTTCCTCCTAAATCT
GT

clustalw multiple alignements is not computed in this case