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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7961#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1014 fasta sequence
[TTCACTACCAATGTTTCTACCGATAGTACAAATGAACATAAAAATTCATTAAAGAAATCTAGTCATCATCCTTCGTCGTCGTCACCATCATCACAAATCGGTGTAACTTTTTATTAATAACGATAATAATAGTAGTAAACACTCTCATGGTGAAATACAAGAACGTAAATATTTACGTATTCCAAATGCATTTTCTGTATCTTCACATATATCCAATACAACTGTATCAGGCGCCAAACATCAACACAGTATGTCTGACAGTCATGTCATTTCTCCGATAATTTCTCCTAGTCATCAAGCAACAAATTCGATGATTGGTGTAACAACCGCTTACTCTGCTACTGCTGGGTTGTCGCCGCCATCAACCCCTTATCCTTCTTCATGTGTTGGTTGTTCACATCAACCACCACCTCCACCATTACCGCCTAGACAAGGTCGTCAAATTTGTAATTGTTGGAAACATTCTAAAACCCCGAATTCCACTGGATCAACTCTCCACAGAATACCTACTCCGCCATCTTCTCTTCATTCATCAAATA-CTTCATGTAT-TTTCTTTTCAACTATTGA-AAATTGTAAGTGTTTCCCACCCCCACCACCACCGTCACCTCCTTTACCTCCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTTACATTAAGTCCAGATACGACTACTATTAATACCACCACTGAGTGTAATATTGCTGAAACAGCACCGCCATTACCGCCAAGAAGAAATGCTTCCAATAATACCAGTACTATTACTACTAATACAACATTATGCAATACATTTATCGGATCACATTAACGGGTCACCTGATGCATGACAATATACTGTATAGTTTCAATATTACTGCTCACTTTTTATGCTGCAAATTCATTCCTTCTCGAATATACACTCTAGTTATAATCTATTCTTTACTGTTACTGATAGCACCATTA]
[-] EMBL CD157438 [TTCACTACCAATGTTTCTACCGATAGTACAAATGAACATAAAAATTCATTAAAGAAATCTAGTCATCATCCTTCGTCGTCGTCACCATCATCACAAATCGGTGTAACTTTTTATTAATAACGATAATAATAGTAGTAAACACTCTCATGGTGAAATACAAGAACGTAAATATTTACGTATTCCAAATGCATTTTCTGTATCTTCACATATATCCAATACAACTGTATCAGGCGCCAAACATCAACACAGTATGTCTGACAGTCATGTCATTTCTCCGATAATTTCTCCTAGTCATCAAGCAACAAATTCGATGATTGGTGTAACAACCGCTTACTCTGCTACTGCTGGGTTGTCGCCGCCATCAACCCCTTATCCTTCTTCATGTGTTGGTTGTTCACATCAACCACCACCTCCACC ]
[+] EMBL AI977669 [ AGAACGTAAATATTTACGTATTCCAAATGCATTTTCTGTATATTCACATATATCCAATACAACTGTATCAGGCGCCAAACATCAACACAGTATGTCTGACAGTCATGTCATTTCTCCGATAATTTCTCCTAGTCATCAAGCAACAAATTCGATGATTGGTGTAACAACCGCTTACTCTGCTACTGCTGGGTTGTCGCCGCCATCAACCCCTTATCCTTCTTCATGTGTTGGTTGTTCACATCAACCACCACCTACACCATTACCGTCTAGACAAGGTCGTCAAATTTGTAATTGTTGGAAACATTCTAAAACCCCGAATTCCACTGGATCAACTCTCCACAGAATACCTACTCCGCCATCTTCTCTTCATTCATCAAATA CTTCATGTAT TTTCTTTTCAACTATTGA AAATTGTAAGTGTTTCCCACCCCCACCACCACCGACACCTTCTTTACCTCCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCC ]
[+] EMBL AI975373 [ TTCTCCGATAATTTCTCCTAGTCATCAAGCAACAAATTCGATGATTAGTGTAACAACCGCTTACTCTGCTACTGCTGGGTTGTCGCCGCCATCAACCCCTTATCCTTCTTCATGTGTTGGTTGTTCACATCAACCACCACCTCCACCATTACCGCCTAGACAAGGTCGTCAAATTTGTAATTGTTGGAAACATTCTAAAACCCCGAATTCCACTGGATCAACTCTCCACAGAATACCTACTCCGACA TCTCTTCATTCATCAAATA CTTCATGTAT TTTCTTTTCAACTATTGA AAATTGTAAGTGTTTCCCACCCNCACCACCACCGTCACCTCCTTTACCTTCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATACTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTCACATTAAGTTCAGATACGACTACTATTAATACCACCACTGAGTGTAATATTGCTGAAACAGCACCGCCA ]
[+] EMBL BF936878 [ TGTTGGTTGTTCACATCAACCACCACCTCCACCATTACCGCCTAGACAAGGTCGTCAAATTTGTAATTGTTGGAAACATTCTAAAACCCCGAATTCCACTGGATCAACTCTCCACAGAATACCTACTCCGCCATCTTCTCTTCATTCATCAAATA CTTCATGTAT TTTCTTTTCAACTATTGA AAATTGTAAGTGTTTCCCACCCCCACCACCACCGCCACCTCCTTTACCTCCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTTACATTAAGTCCAGATACGACTACTATTAATACCACCACTGAGTGTAGTATTGCTGAAACAGCACCGCCATTACCGCCAAGAAGAAATGCTTCCAATAATACCAGTACTATTACTACTAATACAACATTATGCAATACATTTATCGGATCACATTAACGGGTCACCTGATGCATGACAATATACTGTATAGTTTCAATATTACTGCTCACTTTTTATGCTGCAAATTCATTCCTTCTCGAATATACACTCTAGTTATAATCTATTCTTTACTGTTACTGATAGCACCATTA]
[+] EMBL AI977383 [ TTCATCAAATANCTTCATGTATATTTCTTTTCAACTATTGACAAATTGTAAGTGTTTCCCACCCCCACCACCACCGTCACCTCCTTTACCTCCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTTACATTAAGTCCAGATACGACTACTATTAAT ]
[-] EMBL CD160885 [ AAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTTACATTAAGTCCAGATACGACTACTATTA ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||