Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7963 cluster # 7963       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7963#0 length = 844 sequences # 6  

consensusID : consensus_7963#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 844
fasta sequence
                              [CAGGCAGTCGGCCTTATGGACGAGCTAGATAAAGAAATAAACAACTATATAATGCGTGCTAAAGAAATGTACGGGCGGCATTTTCCTGAATTGTCGAAGATAGTTTTGGATAATGTAACATACGTCAAAGTAGTCAAACGCATCGGTCATAGAACAAATTCAAATGTTGACTTGTCAGACCTCGTGCCGGATGAAATAGCTAGTCAAATTAGAGAGGCCTCTATAGTCTCCCTAGGAACAGAAGTAATCGATGAAG--ATGACTATGATCAACGAACTGTGCGATCAGGTACTTGAAGCTTCCGCTTCCCGTACTCAGCTCCACGATTATCTTATCAAGCGAATGGTGGCAGTAGCTCCAAATTTGACAGCTCTCGTTGGAGAACTTTTGGGCGCAAGGCTGATAGCTCGGGCAGGAACACTTGTCAACCTAGCTAAACATCCTGCTTCAACAGTCCAGATACTAGGAGCTGAAAAGGCATTATTCCGAGCATTAAAGACACGACATAACACTCCGAAATATGGTCTGTTGTATCATGCCACACTAGTGACACAGTCAGACAATCAATTCAAGGGTAAAATGTCACGAATGTTGGCTGCAAAAGCATCAATATCAGCTCGTCTAGATGCTCTTGGTGAAGAGGGTGCTGACACAGAAATGGGCATACGAGCAAGGGCATATTTAGAAAAAAGACTTCGACAGTTAGAAGCTGGAACTTTTAATCCAAAATTATCGGCGGTTAAGCGGGGACTAAAGTCAGAGGATGGTCAACCGAAATCAAAAAAGATGAAGGTGGACGAGTGAATAATAATCATTTCAATGTACATATGTTGCAAAAATATACAT]

[-] EMBL CD128007             [CAGGCAGTCGGCCTTATGGACGAGCTAGATAAAGAAATAAACAACTATATAATGCGTGCTAAAGAAATGTACGGGCGGCATTTTCCTGAATTGTCGAAGATAGTTTTGGATAATGTAACATACGTCAAAGTAGTCAAACGCATCGGTCATAGAACAAATTCAAATGTTGACTTGTCAGACCTCGTGCCGGATGAAATAGCTAGTCAAATTAGAGAGGCCTCTATAGTCTCCCTAGGAACAGAAGTAATCGATGAAG  ATGACTATGATCAACGAACTGTGCGATCAGGTACTTGAAGCTTCCGCTTCCCGTACTCAGCTCCACGATTATCTTATCAAGCGAATGGTGGCAGTAGCTCCAAATTTGACAGCTCTCGTTGGAGAACTTTTGGGCGCAAGGCTGATAGCTCGGGCAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD132888             [                                                                                                                                                                                                                                                         GATGAAGATATTACTATGATCAACGAACTGTGCGATCAGGTACTTGAAGCTTCCGCTTCCCGTACTCAGCTCCACGATTATCTTATCAAGCGAATGGTGGCAGTAGCTCCAAATTTGACAGCTCTCGTTGGAGAACTTTTGGGCGCAAGGCTGATAGCTCGGGCAGGAACACTTGTCAACCTAGCTAAACATCCTGCTTCAACAGTCCAGATACTAGGAGCTGAAAAGGCATTATTCCGAGCATTAAAGACACGACATAACACTCCGAAATATGGTCTGTTGTATCATGCCACACTAGTGACACAGTCAGACAATCAATTCAAGGGTAAAATGTCACGAATGTTGGCTGCAAAAGCATCAATATCAGCTCGTCTAGATGCTCTTGGTGAAGAGGGTGCTGACACAGAAATGGGCATACGAGCAAGGGCATATTTAGAAAAAAGACTTCGACAGTTAGAAGCTGGAACTTTTAATCCAAAATTATC                                                                                                                ]
[-] EMBL CD161555             [                                                                                                                                                                                                                                                                                                                                             ATCAAGCGAATGGTGGCAGTAGCTCCAAATTTGACAGCTCTCGTTGGAGAACTTTTGGGCGCAAGGCTGATAGCTCAGGCAGGAACACTTGTCAACCTAGCTAAACATCCTGCTTCAACAGTCCAGATACTAGGAGCTGAAAAGGCATTATTCCGAGCATTAAAGACACGACATAACACTCCGAAATATGGTCTGTTGTATCATGCCACACTAGTGACACAGTCAGACAATCAATTCAAGGGTAAAATGTCACGAATGTTGGCTGCAAAAGCATCAATATCAGCTCGTCTAGATGCTCTTGGTGAAGAGGGTGCTGACACAGAAATGGGCATACGAGCAAGGGCATATTTAGAAAAAAGACTTCGACAGTTAGAAGCTGGAACTTTTAATCCAAAATTATCGGCGGTTAAGCGGGGACTAAAGTCAGAGGATGGTCAACCGAAAT                                                                    ]
[+] EMBL CD096596             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AACAGTCCAGATACTAGGAGCTGAAAAGGCATTATCCCGAGCATTAAAGACACGACATAACACTCTGAAATATGGTCTGTTGTATCATGCCACACTAGTGACACAGTCAGACAATCAATTCAAGGGTAAAATGTCACGAATGTTGGCTGCAAAAGCATCAATATCAGCTCGTCTAGATGCTCTTG                                                                                                                                                                                                                    ]
[-] EMBL AW017088             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTCCGAAATATGGTCTGTTGTATCATGCCACACTAGTGACACAGTCAGACAATCAATTCAAGGGTAAAATGTCACGAATGTTGGCTGCAAAAGCATCAATATCAGCTCGTCTAAATGCTCTTGGTGAAAAGGGTGCTGACACAAAAATGGGCATACGAGCAAGGGCATATTTAGAAAAAAGACTTCGACAGTTAGAAGCTGGAACTTTTAATCCAAAATTATCGGCGGTTAAGCGGGGACTAAAGTCAGAGGATGGTCAACCGAAATCAAAAAAGATGAAGGTGGACGAGTGAATAATAATCATTTCAATGTACATATGTTGCAAAAATATACAT]
[+] EMBL AA999610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TATCAGCTCGTCTAGATGCTCTTGGTGAAGAGGGTGCTGACACAGAAATGGGCATACGAGCAAGGGCATATTTAGAAAAAAGACTTCGACAGTTAGAAGCTGGAACTTTTAATCCAAAATTATCGGCGGTTAAGCGGGGACTAAAGTCAGAGGATGGTCAACCGAAATCAAAGAAGATGAAGGTGGACGAGTGAATAATAATCATTTCAATGTACATATGTTGCAAAAATATACA ]


>consensus_7963#0 CAGGCAGTCGGCCTTATGGACGAGCTAGATAAAGAAATAAACAACTATATAATGCGTGCT AAAGAAATGTACGGGCGGCATTTTCCTGAATTGTCGAAGATAGTTTTGGATAATGTAACA TACGTCAAAGTAGTCAAACGCATCGGTCATAGAACAAATTCAAATGTTGACTTGTCAGAC CTCGTGCCGGATGAAATAGCTAGTCAAATTAGAGAGGCCTCTATAGTCTCCCTAGGAACA GAAGTAATCGATGAAGATGACTATGATCAACGAACTGTGCGATCAGGTACTTGAAGCTTC CGCTTCCCGTACTCAGCTCCACGATTATCTTATCAAGCGAATGGTGGCAGTAGCTCCAAA TTTGACAGCTCTCGTTGGAGAACTTTTGGGCGCAAGGCTGATAGCTCGGGCAGGAACACT TGTCAACCTAGCTAAACATCCTGCTTCAACAGTCCAGATACTAGGAGCTGAAAAGGCATT ATTCCGAGCATTAAAGACACGACATAACACTCCGAAATATGGTCTGTTGTATCATGCCAC ACTAGTGACACAGTCAGACAATCAATTCAAGGGTAAAATGTCACGAATGTTGGCTGCAAA AGCATCAATATCAGCTCGTCTAGATGCTCTTGGTGAAGAGGGTGCTGACACAGAAATGGG CATACGAGCAAGGGCATATTTAGAAAAAAGACTTCGACAGTTAGAAGCTGGAACTTTTAA TCCAAAATTATCGGCGGTTAAGCGGGGACTAAAGTCAGAGGATGGTCAACCGAAATCAAA AAAGATGAAGGTGGACGAGTGAATAATAATCATTTCAATGTACATATGTTGCAAAAATAT ACAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)