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Schistosoma mansoni
cluster # 7967 cluster # 7967       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7967#0 length = 1466 sequences # 6  

consensusID : consensus_7967#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1466
fasta sequence
                              [ATTAGACTGACAGGAGTGTACACAATGAATGCAAAACAGTTATCATAGCACAGGGTAAAACGTTATGCCGGGAGATATTGGACGTATACCCATAATAACTCTTAGCGGATGCAAGTATTTGACCAACATAATCAATGACCTCCCTCTTCCTAAATCGACTAATGTCCCCATAAAATGTCATACTCTACTAAATGATCAAAAATTCGCTCAAGAGGCCTACAGATGTATCAATTGTCAGAATGAGGCCCTTGTTGGAGCACTGATTAAAGCCATAAGCAGTGTTAACAATGATGTACAATTCAAGGACAAGTCTCTTGAGCACACTATAGACTGTCCTACTTCTCCTTTGCTACTTCGAGCCCTCCTGGAAAAGAAGCCAGATATTTTATCTGGTAAGGTTTCACAAAACATCTCGCGTGAACTTGAAGGTCTCCCTACAAATGCACTATTGGTCTCTAGAGGGCCGGCCATTAATAGGCTCAGAACAGCTGATAAGCAGAAAAGTAAGAAGCCTAAGGGTGGCAGCATCACTTATAATGCAGTGAGTGTAGCTCCACTAAAAATCTCGATCAAGAAGACCTGTACTTCGAAAATTAAGAAAACTTCAAGTAGTGGAAAAACTCTAGATGATAATTCCATGAACCATAATATTCAGACGGGAAATTCTCTGGATAAAACTGGAGCATGCCTTGTAAAAATAGCTACTCACACTCTCGATTCTCTAAATCTTTATGATAGTTCAGCAAGCCAAACACTTGATTCTACTACTGAATCCCAGAACAACCCATCTTGTTTGAATAAATCAAAGAAATCAGAAGATTACACTGAAATAGCTGAGAACTCATCGAAACTAATCAATTCTACGGGTTTGATCTCTTTATGCTCTACAATAAATCCCATGACAGACCAGACTAGTTGCACACTGTCAAATTCATCAGCGAATGTTTTGATTGAAGATGCATCAAGAATGGAAGACCCGTCGACTTTACATACTTCTCACTCTCCGTGCAAGGCTGATCAATTGTGTACAGAACACTCCCCGTCTCCTAAAATTAATGATCTTACCTTTGAATCGTCGGGTTATGATACGAACTCAGCTCAAACTCGGCGAATCCCCGATCCAGCGTTGTCCCAAATCTTTCATTCTGTGGCTCTCTTTCACACTTACCAGCCTACATGCGAGCCCGACAAAGGAGTGGATAACGAAGGTGGTGGCCTTTTTGACGACTGGGTCGATGCACCAAAACTTTCGGAATCACCAGTTGTGTCTGTTCCTACAGTACCAAATAAATCTAACCCCACTGGATGTACTTCTCAGACGCCTTGCATTTCATCTACATCAGCAGCCGTCAAGGAGAAGTTATGTATCTGTGCTGATAATGAATCAGTGGGGAGTCTTCCTCGTAGTCCTTTGTCTATGCTTTCAATAACTCATACCCAACCACTTCAGGTAAAACATCCCTGTC]

[-] EMBL CD190327             [ATTAGACTGACAGGAGTGTACACAATGAATGCAAAACAGTTATCATAGCACAGGGTAAAACGTTATGCCGGGAGATATTGGACGTATACCCATAATAACTCTTAGCGGATGCAAGTATTTGACCAACATAATCAATGACCTCCCTCTTCCTAAATCGACTAATGTCCCCATAAAATGTCATACTCTACTAAATGATCAAAAATTCGCTCAAGAGGCCTACAGATGTATCAATTGTCAGAATGAGGCCCTTGTTGGAGCACTGATTAAAGCCATAAGCAGTGTTAACAATGATGTACAATTCAAGGACAAGTCTCTTGAGCACACTATAGACTGTCCTACTTCTCCTTTGCTACTTCGAGCCCTCCTGGAAAAGAAGCCAGATATTTTATCTGGTAAGGTTTCACAAAACATCTCGCGTGAACTTGAAGGTCTCCCTACAAATGCACTATTGGTCTCTAGAGGGCCGGCCATTAATAGGCTCAGAACAGCTGATAAGCAGAAAAGTAAGAAGCCTAAGGGTGGCAGCATCACTTATAATGCAGTGAGTGTAGCTCCACTAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD185042             [                                                                                                                                                                                                                                                                       TTAAAGCCATAAGCAGTGTTAACAATGATGTACAATTCAAGGACAAGTCTCTTGAGCACACTATAGACTGTCCTACTTCTCCTTTGCTACTTCGAGCCCTCCTGGAAAAGAAGCCAGATATTTTATCTGGTAAGGTTTCACAAAACATCTCGCGTGAACTTGAAGGTCTCCCTACAAATGCACTATTGGTCTCTAGAGGGCCGGCCATTAATAGGCTCAGAACAGCTGATAAGCAGAAAAGTAAGAAGCCTAAGGGTGGCAGCATCACTTATAATGCAGTGAGTGTAGCTCCACTAAAAATCTCGATCAAGAAGACCTGTACTTCGAAAATTAAGAAAACTTCAAGTAGTGGAAAAACTCTAGATGATAATTCCATGAACCATAATATTCAGACGGGAAATTCTCTGGATAAAACTGGAGCATGCCTTGTAAAAATAGCTACTCACACTCTCGATTCTCTNAATCTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD179421             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TATAATGCAGTGAGTGTAGCTCCACTAAAAATCTCGATCAAGAAGACCTGTACTTCGAAAATTAAGAAAACTTCAAGTAGTGGAAAAACTCTAGATGATAATTCCATGAACCATAATATTCAGACGGGAAATTCTCTGGATAAAACTGGAGCATGCCTTGTAAAAATAGCTACTCACACTCTCGATTCTCTAAATCTTTATGATAGTTCAGCAAGCCAAACACTTGATTCTACTACTGAATCCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD183542             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCTGGATAAAACTGGAGCATGCCTTGTAAAAATAGCTACTCACACTCTCGATTCTCTAAATCTTTATGATAGTTCAGCAAGCCAAACACTTGATTCTACTACTGAATCCCAGAACAACCCATCTTGTTTGAATAAATCAAAGAAATCAGAAGATTACACTGAAATAGCTGAGAACTCATCGAAACTAATCAATTCTACGGGTTTGATCTCTTTATGCTCTACAATAAATCCCATGACAGACCAGACTAGTTGCACACTGTCAAATTCATCAGCGAATGTTTTGATTGAAGATGCATCAAGAATGGAAGACCCGTCGACTTTACATACTTCTCACTCTCCGTGCAAGGCTGATCAATTGTGTACAGAACACTCCCCGTCTCCTAAAATTAATGATCTTACCTTTGAATCGTCGGGTTATGATACGAACTCAGCTCANACTCGGCGAATCCCCGATCCAGCGTTGTCCCANATCTTTCATTCTGTGGCTCTCT                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD065218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AATCAATTCTACGGGTTTGATCTCTTTATGCTCTACAATAAATCCCATAACAGACCAGACTAGTTGCACACTGTCAAATTCATCAGCGAATGTTTTGATTGAAGATGCATCAAGAATGGAAGACCCGTCGACTTTACATACTTCTCACTCTCCGTGCAAGGCTGATCAATTGTGTACAGAACACTCCCCGTCTCCTAAAATTAATGATCTTACCTTTGAATCGTCGGGTTATGATACGAACTCAGCTCAAACTCGGCGAATCCCCGATCCAGCGTTGTCCCAAATCTTTCATTCTGTGGCTCTCTTTCACACTTACCAGCCTACATGCGAGCCCGACAAAGGAGTGGATAACGAAGGTGGTGGCCTTTTTGACGACTGGGTCGATGCACCAAAACTTTCGGAATCACCAGTTGTGTCTGTTCCTACAGTACCAAATAAATCTAACCCCACTGGATGTACTTCTCAGACGCCTTGCATTTCATCTACATCAGCAGCCGTCAAGGAGAAGTTATGTATCTGTGCTGATAATGAATCAGTGGGGAGTCTTCCTCGTAGTCCTTTGTCTATGCTTTCAATAACTCATACCCAACCACTTCAGGTAAAACATCCCTGTC]
[-] EMBL CD123026             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATTCATCAGCGAATGTTTTGATTGAAGATGCATCAAGAATGGAAGACCCGTCGACTTTACATACTTCTCACTCTCCGTGCAAGGCTGATCAATTGTGTACAGAACACTCCCCGTCTCCTAAGATTAATGATCTTACCTTTGAATCGTCGGGTTATGATACGAACTCAGCTCAAACTCGGCGAATCCCCGATCCAGCGTTGTCCCAAATCTTTCATTCTGTGGCTCTCTTTCACACTTACCAGCCTACATGCGAGCCCGACAAAGGAGTGGATAACGAAGGTGGTGGCCTTTTTGACGACTGGGTCGATGCACCAAAACTTTCGGAATCACCAGTTGTGTCTGTTCCTACAGTACCAAATAAATCTAACCCCACTGGATGTACTTCTCAGACGCCTTGCATTTCATCTACATCAGCAGCCGTCAAGGAGAAGTTATGTATCTGTGCTGATAAT                                                                                     ]


>consensus_7967#0 ATTAGACTGACAGGAGTGTACACAATGAATGCAAAACAGTTATCATAGCACAGGGTAAAA CGTTATGCCGGGAGATATTGGACGTATACCCATAATAACTCTTAGCGGATGCAAGTATTT GACCAACATAATCAATGACCTCCCTCTTCCTAAATCGACTAATGTCCCCATAAAATGTCA TACTCTACTAAATGATCAAAAATTCGCTCAAGAGGCCTACAGATGTATCAATTGTCAGAA TGAGGCCCTTGTTGGAGCACTGATTAAAGCCATAAGCAGTGTTAACAATGATGTACAATT CAAGGACAAGTCTCTTGAGCACACTATAGACTGTCCTACTTCTCCTTTGCTACTTCGAGC CCTCCTGGAAAAGAAGCCAGATATTTTATCTGGTAAGGTTTCACAAAACATCTCGCGTGA ACTTGAAGGTCTCCCTACAAATGCACTATTGGTCTCTAGAGGGCCGGCCATTAATAGGCT CAGAACAGCTGATAAGCAGAAAAGTAAGAAGCCTAAGGGTGGCAGCATCACTTATAATGC AGTGAGTGTAGCTCCACTAAAAATCTCGATCAAGAAGACCTGTACTTCGAAAATTAAGAA AACTTCAAGTAGTGGAAAAACTCTAGATGATAATTCCATGAACCATAATATTCAGACGGG AAATTCTCTGGATAAAACTGGAGCATGCCTTGTAAAAATAGCTACTCACACTCTCGATTC TCTAAATCTTTATGATAGTTCAGCAAGCCAAACACTTGATTCTACTACTGAATCCCAGAA CAACCCATCTTGTTTGAATAAATCAAAGAAATCAGAAGATTACACTGAAATAGCTGAGAA CTCATCGAAACTAATCAATTCTACGGGTTTGATCTCTTTATGCTCTACAATAAATCCCAT GACAGACCAGACTAGTTGCACACTGTCAAATTCATCAGCGAATGTTTTGATTGAAGATGC ATCAAGAATGGAAGACCCGTCGACTTTACATACTTCTCACTCTCCGTGCAAGGCTGATCA ATTGTGTACAGAACACTCCCCGTCTCCTAAAATTAATGATCTTACCTTTGAATCGTCGGG TTATGATACGAACTCAGCTCAAACTCGGCGAATCCCCGATCCAGCGTTGTCCCAAATCTT TCATTCTGTGGCTCTCTTTCACACTTACCAGCCTACATGCGAGCCCGACAAAGGAGTGGA TAACGAAGGTGGTGGCCTTTTTGACGACTGGGTCGATGCACCAAAACTTTCGGAATCACC AGTTGTGTCTGTTCCTACAGTACCAAATAAATCTAACCCCACTGGATGTACTTCTCAGAC GCCTTGCATTTCATCTACATCAGCAGCCGTCAAGGAGAAGTTATGTATCTGTGCTGATAA TGAATCAGTGGGGAGTCTTCCTCGTAGTCCTTTGTCTATGCTTTCAATAACTCATACCCA ACCACTTCAGGTAAAACATCCCTGTC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)