Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7998 cluster # 7998       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7998#0 length = 648 sequences # 6  

consensusID : consensus_7998#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 648
fasta sequence
                              [AAATAAATAGTCGTAGCAACGCGCAGTTTTCAACTGCCTGACGCGTCATGGCCTCGTTTTTTGATGTCAGCTCTAAGAGGAAAGATAAAAAAGAAGAGGAAGAAGGCTACGGAGCAGTGTATGCAAAGCTGGATAAAACTGTGGTTTTGCAAGAAGCCCGCTTGTTTAATCAAACAACACTTAACCCAAGGAAATGTGTGCACATCTTGACTAAAATTCTAGTGATTTTGGAGCAGAGTGAAAAGTTGGGGAAGATAGAGGCGACGGATGCTTTTTTCGCAATGACCAAGTTGTTTCAATCTAATGACCAAAATCTTCGTCGCATGCTTTACCTAGTGATTAAAGAATTGTCTACTGTTGCAGATGATGTGA-TTATTGTTACGAGCAGCTTGACTAAAGATATGACTGGTCCAGAAATTGCTTTTCGAGGCCCTGCAATTCGGGCGCTTTGTACTATTACGGATGCAGCGATGGTCCAGAGTATTGAACGCTACCTANAGCAGGCTGTAGTAGATAAGTCCCCTGCCATAGCATCAGCTGTGTTGACGTCTGCATATAAGTTAATGAGTGTTTGTCCGGATATTATCANAAGATGGACGAACGAAGTACAAGAAGCTGCATCGGGGCTCTCGTGTAATGGTACAATAT]

[-] EMBL CD111611             [AAATAAATAGTCGTAGCAACGCGCAGTTTTCAACTGCCTGACGCGTCATGGCCTCGTTTTTTGATGTCAGCTCTAAGAGGAAAGATAAAAAAGAAGAGGAAGAAGGCTACGGAGCAGTGTATGCAAAGCTGGATAAAACTGTGGTTTTGCAAGAAGCCCGCTTGTTTAATCAAACAACACTTAACCCAAGGAAATGTGTGCACATCTTGACTAAAATTCTAGTGATTTTGGAGCAGAGTGAAAAGTTGGGGAAGATAGAGGCGACGGATGTTTTTTTCGCAATGACCAAGTTGTTTCAATCTAATGACCAAAATCTTCGTC                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD112033             [                 AACGCGCAGTTTTCAACTGCCTGACGCGTCATGGCCTCGTTTTTTGATGTCAGCTCTAAGAGGAAAGATAAAAAAGAAGAGGAAGAAGGCTACGGAGCAGTGTATGCAAAGCTGGATAAAACTGTGGTTTTGCAAGAAGCCCGCTTGTTTAATCAAACAACACTTAACCCAAGGAAATGTGTGCACATCTTGACTAAAATTCTAGTGATTTTGGAGCAGAGTGAAAAGTTGGGGAAGATAGAGGCGACGGATGCTTTTTTCGCAATGACCAAGTTGTTTCAATCTAATGACCAAAATCTTCGTCGCATGCTTTACCTAGTGATTAAAGAATTGTCTACTGTTGCAGATGATGTGATTTATTG TACGAGCAGCTTGACTAAAGATATGACTGGTCCcag                                                                                                                                                                                                                                         ]
[+] EMBL CD098419             [                               AACTGCCTGACGCGTCATGGCCTCGTTTTTTGATGTCAGCTCTAAGAGGAAAGATAAAAAAGAAGAGGAAGAAGGCTACGGAGCAGTGTATGCAAAGCTGGATAAAACTGTGGTTTTGCAAGAAGCCCGCTTGTTTAATCAAACAACACTTAACCCAAGGAAATGTGTGCACATCTTGACTAAAATTCTAGTGATTTTGGAGCAGAGTGGAAAGTTGGGGAAGATAGAGGCGACGGATGCTTTTTTCGCAATGACCAAGTTGTTTCAATCTAATGACCAAAATCTTCGTC                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD111533             [                                ACTGCCTGACGCGTCATGGCCTCGTTTTTTGATGTCAGCTCTAAGAGGAAAGATAAAAAAGAAGAGGAAGAAGGCTACGGAGCAGTGTATGCAAAGCTGGATAAAACTGTGGTTTTGCAAGAAGCCCGCTTGTTTAATCAAACAACACTTAACCCAAGGAAATGTGTGCACATCTTGACTAAAATTCTAGTGATTTTGGAGCAGAGTGAAAAGTTGGGGAAGATAGAGGCGACGGATGCTTTTTTCGCAATGACCAAGTTGTTTCAATCTAATGACCAAAATCTTCGTCG                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD165446             [                                                           TTTGATGTCAGCTCTAAGAGGAAAGATAAAAAAGAAGAGGAAGAAGGCTACGGAGCAGTGTATGCAAAGCTGGATAAAACTGTGGTTTTGCAAGAAGCCCGCTTGTTTAATCAAACAACACTTAACCCAAGGAAATGTGTGCACATCTTGACTAAAATTCTAGTGATTTTGGAGCAGAGTGAAAAGTTGGGGAAGATAGAGGCGACGGATGCTTTTTTCGCAATGACCAAGTTGTTTCAATCTAATGACCAAAATCTTCGTCGCATGCTTTACCTAGTGATTAAAGAATTGTCTACTGTTGCAGATGATGTGA TTATTGTTACGAGCAGCTTGACTAAAGATATGACTGGTCCAGAAATTGCTTTTCGAGGCCCTGCAATTCGGGCGCTTTGTACTATTACGGATGCAGCGATGGTCCAGAGTATTGAACGCTACCTANAGCAGGCTGTAGTAGATAAGTCCCCTGCCATAGCATCAGCTGTGTTGACGTCTGCATATAAGTTAATGAGTGTTTGTCCGGATATTATCANAAGATGGACG                                                 ]
[+] EMBL AI976134             [                                                                                                     GAAGGCTACGGAGCAGTGTATGCAAAGCTGGATAAAACTGTGGTTTTGCAAGAAGCCCGCTTGTTTAATCAAACAACACTTAACCCAAGGAAATGTGTGCACATCTTGACTAAAATTCTAGTGATTTTGGAGCAGAGTGAAAAGTTGGGGAAGATAGAGGCGACGGATGCTTTTTTCGCAATGACCAAGTTGTTTCAATCTAATGACCAAAATCTTCGTCGCATGCTTTACCTAGTGATTAAAGAATTGTCTACTGTTGCAGATGATGTGA TTATTGTTACGAGCAGCTTAACTAAAGATATGACTGGTCCAGAAATTGCTTTTCGAGGCCCTGCAATTCGGGCGCTTTGTACTATTACGGATGCAGCGATGGTCCAGAGTATTGAACGCTACCTAAAGCAGGCTGTAGTAGATAAGTCCCCTGCCATAGCATCAGCTGTGTTGACGTCTGCATATAAGTTAATGAGTGTTTGTCCGGATATTATCAAAAGATGGACGAACGAAGTACAAGAAGCTGCATCGGGGCTCTCGTGTAATGGTACAATAT]


>consensus_7998#0 AAATAAATAGTCGTAGCAACGCGCAGTTTTCAACTGCCTGACGCGTCATGGCCTCGTTTT TTGATGTCAGCTCTAAGAGGAAAGATAAAAAAGAAGAGGAAGAAGGCTACGGAGCAGTGT ATGCAAAGCTGGATAAAACTGTGGTTTTGCAAGAAGCCCGCTTGTTTAATCAAACAACAC TTAACCCAAGGAAATGTGTGCACATCTTGACTAAAATTCTAGTGATTTTGGAGCAGAGTG AAAAGTTGGGGAAGATAGAGGCGACGGATGCTTTTTTCGCAATGACCAAGTTGTTTCAAT CTAATGACCAAAATCTTCGTCGCATGCTTTACCTAGTGATTAAAGAATTGTCTACTGTTG CAGATGATGTGATTATTGTTACGAGCAGCTTGACTAAAGATATGACTGGTCCAGAAATTG CTTTTCGAGGCCCTGCAATTCGGGCGCTTTGTACTATTACGGATGCAGCGATGGTCCAGA GTATTGAACGCTACCTANAGCAGGCTGTAGTAGATAAGTCCCCTGCCATAGCATCAGCTG TGTTGACGTCTGCATATAAGTTAATGAGTGTTTGTCCGGATATTATCANAAGATGGACGA ACGAAGTACAAGAAGCTGCATCGGGGCTCTCGTGTAATGGTACAATAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)