cluster # 8001

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Schistosoma mansoni
cluster # 8001 cluster # 8001 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8001#0 length = 378 sequences # 6

consensusID : consensus_8001#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 378
fasta sequence

                              [TTTTGTCATTGATATAGGAATCGTACTTAGTACGAGAGGAACCGTACGTTCGGACATTTGGTTTACGTATTTGTTCGAAAGGACAATGATGCGAAGCTACCATCCGACGGCTTACAACTGAACGCCTCTAAGTTGGAATCCGATCTAGACTCAATGATTCTTTGGCACATTGGTTGTCGTCAGCACATTTATATATGTTCAAACTGTTGATCAAGTGAACATATGAATGAAGCTACAGTA-TTGTTGCTCGAGTGTGATCGAAATGAGATTACGGCCGCAACAGTGCATTTTTAGTCGAAACAACACTAATGGCTTGAATCGATTGTAAACGACTTTCTTCAGTAACAGAGTAACGTACACGTGAGAGCAACCGCCACA]

[+] EMBL CD086917             [TTTTGTCATTGATATAGGAATCGTACTTAGTACGAGAGGAACCGTACGTTCGGACATTTGGTTTACGTATTTGTTCGAAAGGACAATGATGCGAAGCTACCATCCGACGGCTTACAACTGAACGCCTCTAAGTTGGAATCCGATCTAGACTCAATGATTCTTTGGCACATTGGTTGTCGTCAGCACATTTATATATGTTCAAACTGTTGATCAAGTGAACATATGAATGAAGCTACAGTA TTGTTGCTCGAGTGTGATCGAAATGAGATTACGGCCGCAACAGTGCATTTTTAGTCGAAACAACACTAATGGCTTGAATCGATTGTAAA                                                 ]
[+] EMBL CD086074             [                                             cctaccagcCATTTGGTTTACGTATTTGTTCGAAAGGACAATGATGCGAAGCTACCATCCGACGGCTTACAACTGAACGCCTCTAAGTTGGAATCCGATCTAGACTCAATGATTCTTTGGCACATTGGTTGTCGTCAGCACATTTATATATGTTCAAACTGTTGATCAAGTGAACATATGAATGAAGCTACAGTA TTGTTGCTCGAGTGTGATCGAAATGAGATTACGGCCGCAACAGTGCATTTTTAGTCGAAACAACACTAATGGCTTGAATCGATTGTAAACGACTTTCTTCAGTAACAGAGTAACGTACACGTGAGAGCAACCGCCAC ]
[-] EMBL CD086197             [                                                                ACGTATTTGTTCGAAAGGACAATGATGCGAAGCTACCATCCGACGGCTTACAACTGAACGCCTCTAAGTTGGAATCCGATCTAGACTCAATGATTCTTTGGCACATTGGTTGTCGTCAGCACATTTATATATGTTCAAACTGTTGATCAAGTGAACATATGAATGAAGCTACAGTA TTGTTGCTCGAGTGTGATCGAAATGAGATTACGGCCGCAACAGTGCATTTTTAGTCGAAACAACACTAATGGCTTGAATCGATTGTAAACGACTTTCTTCAGTAACAGAGTAACGTACACGTGAGAGCAACCGCCACA]
[-] EMBL CD086131             [                                                                ACGTATTTGTTCGAAAGGACAATGATGCGAAGCTACCATCCGACGGCTTACAACTGAACGCCTCTAAGTTGGAATCCGATCTAGACTCAATGATTCTTTGGCACATTGGTTGTCGTCAGCACATTTATATATGTTCAAACTGTTGATCAAGTGAACATATGAATGAAGCTACAGTACTTGTTGCTCG                                                                                                                                ]
[-] EMBL CD086146             [                                                                ACGTATTTGTTCGAAAGGACAATGATGCGAAGCTACCATCCGACGGCTTACAACTGAACGCCTATAAGTTGGAATCCGATCTAGACTCAATGATTCTTTGGCACATTGGTTGTCGTCAGCACATTTATATATGTTCAAACTGTT ATCAAGT AACATAT AATGA                                                                                                                                                     ]
[+] EMBL CD089182             [                                                                  GTATTTGTTCGAAAGGACAATGATGCGAAGCTACCATCCGACGGCTTACAACTGAACGCCTCTAAGTTGGAATCCGATCTAGACTCAATGATTCTTTGGCACATTGGTTGTCGTCAGCACATTTATATATGTTCAAACTGTTGATCAAGTGAACATATGAATGAAGCTACAGTA TTGTTGCTCGAGTGTGATCGAAATGAGATTACGGCCGCAACAGTGCATTTTTAGTCGAAACAACACTAATGGCTTGAATCGATTGTAAAC                                                ]




>consensus_8001#0
TTTTGTCATTGATATAGGAATCGTACTTAGTACGAGAGGAACCGTACGTTCGGACATTTG
GTTTACGTATTTGTTCGAAAGGACAATGATGCGAAGCTACCATCCGACGGCTTACAACTG
AACGCCTCTAAGTTGGAATCCGATCTAGACTCAATGATTCTTTGGCACATTGGTTGTCGT
CAGCACATTTATATATGTTCAAACTGTTGATCAAGTGAACATATGAATGAAGCTACAGTA
TTGTTGCTCGAGTGTGATCGAAATGAGATTACGGCCGCAACAGTGCATTTTTAGTCGAAA
CAACACTAATGGCTTGAATCGATTGTAAACGACTTTCTTCAGTAACAGAGTAACGTACAC
GTGAGAGCAACCGCCACA

clustalw multiple alignements is not computed in this case