cluster # 8023

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Schistosoma mansoni
cluster # 8023 cluster # 8023 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8023#0 length = 564 sequences # 6

consensusID : consensus_8023#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 564
fasta sequence

                              [CATTTGTAGTGAAACAAATGGATTAGAAAACGAATCAATTAAAGGTTATCTAAGTCCAAAGCAGTCGGAGAACAGGTGGGAAGTGGAGTCAAAAGTACGACAAAGTAAAAAAGCAAGTCACAAAAACACAAAGCCACAGC-AAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTTAGCGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACCATATCAGTTCAGAATCTCCATCAACCTCCCTACATAATCAGGTCAAGTCAGTTAGTTTAGATTTTAGTGAGTCATTGCTCAATACAAGCGAATCTCAGTT]

[+] EMBL CD154379             [CATTTGTAGTGAAACAAATGGATTAGAAAACGAATCAATTAAAGGTTATCTAAGTCCAAAGCAGTCGGAGAACAGGTGGGAAGTGGAGTCAAAAGTACGACAAAGTAAAAAAGCAAGTCACAAAAACACAAAGCCACAGC AAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTTAGCGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACCATATCAGTTCAGAATCTCCATCAACCTCCCTACATAATCAGGTCAAGTCAGTTAGTTTAGATTTTAGTGAGTCATTGCTCAATACAAGCGAATCTCAGTT]
[-] EMBL CD119447             [                                                                         AGGTGGNAAGTGGAGTCAAAAGTACGACAAAGTAAAAAAGCAAGTCACAAAAACACAAAGCCACAGC AAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAATGAAATACTTGATGATAAAGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTAAGAGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACgga                                                                                                  ]
[+] EMBL CD084256             [                                                                                                 CGACAAAGTAAAAAAGCAAGTCACAAAAACACAAAGCCACAGCAAAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGCATTAGTAAGA                                                                                                                                                                                                                                                                            ]
[-] EMBL CD149330             [                                                                                                                                 anAGCCACAGC AAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTTAGCGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACCATATC                                                                                               ]
[-] EMBL CD141305             [                                                                                                                                                                                          tATTTTCAAAAAGAGATCNCGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTNAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTTAGCGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACCATATCAGTTCAGAAT                                                                                     ]
[-] EMBL CD149235             [                                                                                                                                                                                                                                                                                                TTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAATAATAAGCGTGAAGGGCACGTGCACAATCGTAATTTTAGCGTTTCACAGTGGCCGAGTAACGAACATTTTCAGGGTAACTTTTGTAGATATACAAGTTTGTATGATTGTAATTTAGACCATATC                                                                                               ]




>consensus_8023#0
CATTTGTAGTGAAACAAATGGATTAGAAAACGAATCAATTAAAGGTTATCTAAGTCCAAA
GCAGTCGGAGAACAGGTGGGAAGTGGAGTCAAAAGTACGACAAAGTAAAAAAGCAAGTCA
CAAAAACACAAAGCCACAGCAAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGA
AATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGA
GATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGA
CAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGG
GGACGTGCACAATCGTAATTTTAGCGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGC
TAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACCATATCAGTTCAGAATC
TCCATCAACCTCCCTACATAATCAGGTCAAGTCAGTTAGTTTAGATTTTAGTGAGTCATT
GCTCAATACAAGCGAATCTCAGTT

clustalw multiple alignements is not computed in this case