These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8023#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 564 fasta sequence [CATTTGTAGTGAAACAAATGGATTAGAAAACGAATCAATTAAAGGTTATCTAAGTCCAAAGCAGTCGGAGAACAGGTGGGAAGTGGAGTCAAAAGTACGACAAAGTAAAAAAGCAAGTCACAAAAACACAAAGCCACAGC-AAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTTAGCGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACCATATCAGTTCAGAATCTCCATCAACCTCCCTACATAATCAGGTCAAGTCAGTTAGTTTAGATTTTAGTGAGTCATTGCTCAATACAAGCGAATCTCAGTT] [+] EMBL CD154379 [CATTTGTAGTGAAACAAATGGATTAGAAAACGAATCAATTAAAGGTTATCTAAGTCCAAAGCAGTCGGAGAACAGGTGGGAAGTGGAGTCAAAAGTACGACAAAGTAAAAAAGCAAGTCACAAAAACACAAAGCCACAGC AAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTTAGCGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACCATATCAGTTCAGAATCTCCATCAACCTCCCTACATAATCAGGTCAAGTCAGTTAGTTTAGATTTTAGTGAGTCATTGCTCAATACAAGCGAATCTCAGTT] [-] EMBL CD119447 [ AGGTGGNAAGTGGAGTCAAAAGTACGACAAAGTAAAAAAGCAAGTCACAAAAACACAAAGCCACAGC AAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAATGAAATACTTGATGATAAAGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTAAGAGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACgga ] [+] EMBL CD084256 [ CGACAAAGTAAAAAAGCAAGTCACAAAAACACAAAGCCACAGCAAAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGCATTAGTAAGA ] [-] EMBL CD149330 [ anAGCCACAGC AAAACTCAAGCGTAAAAACAAGCAACGAAAATTTCAAGGAAATCCAATTTTCAAAAAGAGATCACGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTTAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTTAGCGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACCATATC ] [-] EMBL CD141305 [ tATTTTCAAAAAGAGATCNCGGCGACAGTCAGAAACCATTGCATCATCCTAATGAGATTCTTGTAGCGGATAATTNAATGCCATCTACCACAGAAATTGGAATTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAAAAATAAGCGTGAAGGGGACGTGCACAATCGTAATTTTAGCGTTTCACCGTGGCCGAGTAACGAACATTTTCAGGCTAACTTTTGCAGATATACAAGTTTGTCTGATTGTAATCTAGACCATATCAGTTCAGAAT ] [-] EMBL CD149235 [ TTAGTAAGAATGACAGTGAAATACTTGATGATGATGACTTTTCCTTTAACGAAGAAAATAATAAGCGTGAAGGGCACGTGCACAATCGTAATTTTAGCGTTTCACAGTGGCCGAGTAACGAACATTTTCAGGGTAACTTTTGTAGATATACAAGTTTGTATGATTGTAATTTAGACCATATC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||