Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8035 cluster # 8035       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8035#0 length = 875 sequences # 6  
consensusID : consensus_8035#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 875
fasta sequence 
                              [TTTAGAAGCAGTCTTTTTGTAAATTTTCACCGCTACTTGTCGACCACGATAGGTAGCTTTAAGAACTTCACCGAATTCTCCACGTCCAATACGATCACCTAATGCAATTTCTTTGCGAAAAATGAGATAACCAAATTTTTGTAATTCACTTAATCGTTTTCTTTGCATATCTGGGACTGGATGAAGAAGCGCACAAACTAATCCGCGTTTGGGTTCCGAATAAAACTGAACTAGTTCTAAAAGGCTTGAAAACCAATCTGTTTCGTCTAACGTGTAGTGGATTTTGCTGCAAATTAGAGGTGTTGAATATTCGGAATGTTGGTTAGAAGGGGTAGCTTTGAAAGGCCTACGGACTATGCGATAGTGCTGTACATTAGTCATAGTATTTGGAGGCGTCACTGTAGAATTTTGGTGTTCAGTAGTATCTGGGCTTCCGACTGCACATGCAGGTCCAACAACACATAATGTTAAACCGCCACTGTACAAATCGGACTCACGTATTAGAAAACTTCCGACAGGACTACCAGAAAGTAAACTCTCTGATTCGGCACGAGAAATCCGTCCATGATACCAACAGTGATCTTTGAGATTTTCTAAAATATCCGCCTTTCGCTGAACGTAATTTAGGGGGATAAGCCCAGTCTCTCCAAAAGCATTCTTCGCATGGGCCCAATTCGGATCTTTGCCAATATTAATGATTTCTAGTGTTTCATTTTTACTAAATGGTAAATCTTCATTTTTGTCCTTCTTGAATGTGTAATTGGCTTTCACAACATCCCCAGCTTTGAACCCGCATTCCATCATACGTTCAAAGGTCATAATTTATGGGCACGTCGTTTGGATTTGCATTTTAGTTGTTTTATACGTTGCTTCCA]

[+] EMBL CD128147             [TTTAGAAGCAGTCTTTTTGTAAATTTTCACCGCTACTTGTCGACCACGATAGGTAGCTTTAAGAACTTCACCGAATTCTCCACGTCCAATACGATCACCTAATGCAATTTCTTTGCGAAAAATGAGATAACCAAATTTTTGTAATTCACTTAATCGTTTTCTTTGCATATCTGGGACTGGATGAAGAAGCGCACAAACTAATCCGCGTTTGGGTTCCGAATAAAACTGAACTAGTTCTAAAAGGCTTGAAAACCAATCTGTTTCGTCTAACGTGTAGTGGATTTTGCTGCAAATTAGAGGTGTTGAATATTCGGAATGTTGGTTAGAAGGGGTAGCTTTGAAAGGCCTACGGACTATGCGATAGTGCTGTACATTAGTCATAGTATTTGGAGGCGTCACTGTAGAATTTTGGTGTTCAGTAGTATCTGGGCTTCCGACTGCACATGCAGGTCCAACAACACATAATGTTAAACCGCCACTGTACAAATCGGACTCACGTATTAGAAAACTTCCGACAGGACTACCAGAAAGTA                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD128167             [                                                                                                                                                                                                                                                                                                      TAGAGGTGTTGAATATTCGGAATGTTGGTTAGAAGGGGTAGCTTTGAAAGGCCTACGGACTATGCGATAGTGCTGTACATTAGTCATAGTATTTGGAGGCGTCACTGTAGAATTTTGGTGTTCAGTAGTATCTGGGCTTCCGACTGCACATGCAGGTCCAACAACACATAATGTTAAACCGCCACTGTACAAATCGGACTCACGTATTAGAAAACTTCCGACAGGACTACCAGAAAGTA                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD142488             [                                                                                                                                                                                                                                                                                                                                       AGGGGTAGCTTTGAAAGGCCTACGGACTATGCGATAGTGCTGTACATTAGTCATAGTATTTGGAGGCGTCACTGTAGAATTTTGGTGTTCAGTAGTATCTGGGCTTCCGACTGCACATGCGNGTCCAACAACACATAATGTTAAACCGCCACTGTACAAATCGGACTCACGTATTAGAAAACTTCCGACAGAACTACCAGAAAGTAAACTCTCTGATTCGGCACGAGAAATCCGTCCATGATACC ACAGT                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AI977490             [                                                                                                                                                                                                                                                                                                                                                                                                                                   TAGTATCTGGGCTTCCGACTGCACATGCAGGTCCAACAACACATAATGTTAAACCGCCACTGTACAAATCGGACTCACGTATTAGAAAACTTCCGACAGGACTACCAGAAAGTAAACTCTCTGATTCGGCACGAGAAATCCGTCCATGATACCAACAGTGATCTTTGAGATTTTCTAAAATATCCGCCTTTCGCTGAACGTAATTTAGGGGGATAAGCCCAGTCTCTCCAAAAGCATTCTTCGCATGGGCCCAATTCGGATCTTTGCCAATATTAATGATTTCTAGTGTTTCATTTTTACTAAATGGTAAATCTTCATTTTTGTCCTTCTTGAATGTGTAATTGGCTTTCACAACATCCCCAGCTTTGAACCCGCATTCCATCATACGTTCAAAGGTCATAATTTATGGGCACGTCGTTTGGATTTGCATTTTAGTTGTTTTATACGTTGCTTCCA]
[-] EMBL CD142424             [                                                                                                                                                                                                                                                                                                                                                                                                                                    AGTATCTGGGCTTCCGACTGCACATGCAGGTCCAACAACACATAATGTTAAACCGCCACTGTACAAATCGGACTCACGTATTAGAAAACTTCCGACAGGACTACCAGAAAGTAAACTCTCTGATTCGGCACGAGAAATCCGTCCATGATACCAACAGTGATCTTTGAGATTTTCTAAAATATCCGCCTTTCGCTGAACGTAATTTAGGGGGATAAGCCCAGTCTCTCCAAAAGCATTCTTCGCATGGGCCCAATTCGGATCTTTGCCAATATTAATGATTTCTAGTGTTTCATTTTTACTAAATGGTAAATCTTCATTTTTGTCCTTCTTGAATGTGTAATTGGCTTTCACAACATCCCCAGCT                                                                                           ]
[-] EMBL CD142301             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tgTCTAAAATATCCGCCTTTCGCTGACTGTAATTTAGGGGGATAAGCCCAGTCTCTCCAAAAGCATTCTTCGCATGGGCCCAATTCGGATCTTTGCCAATATTAATGATTTCTAGTGTTTCATTTTTACTAAATGGTAAATCTTCATTTTTGTCCTTCTTGAATGTGTAATTGGCTTTCACAACATCCCCAGCT                                                                                           ]




>consensus_8035#0
TTTAGAAGCAGTCTTTTTGTAAATTTTCACCGCTACTTGTCGACCACGATAGGTAGCTTT
AAGAACTTCACCGAATTCTCCACGTCCAATACGATCACCTAATGCAATTTCTTTGCGAAA
AATGAGATAACCAAATTTTTGTAATTCACTTAATCGTTTTCTTTGCATATCTGGGACTGG
ATGAAGAAGCGCACAAACTAATCCGCGTTTGGGTTCCGAATAAAACTGAACTAGTTCTAA
AAGGCTTGAAAACCAATCTGTTTCGTCTAACGTGTAGTGGATTTTGCTGCAAATTAGAGG
TGTTGAATATTCGGAATGTTGGTTAGAAGGGGTAGCTTTGAAAGGCCTACGGACTATGCG
ATAGTGCTGTACATTAGTCATAGTATTTGGAGGCGTCACTGTAGAATTTTGGTGTTCAGT
AGTATCTGGGCTTCCGACTGCACATGCAGGTCCAACAACACATAATGTTAAACCGCCACT
GTACAAATCGGACTCACGTATTAGAAAACTTCCGACAGGACTACCAGAAAGTAAACTCTC
TGATTCGGCACGAGAAATCCGTCCATGATACCAACAGTGATCTTTGAGATTTTCTAAAAT
ATCCGCCTTTCGCTGAACGTAATTTAGGGGGATAAGCCCAGTCTCTCCAAAAGCATTCTT
CGCATGGGCCCAATTCGGATCTTTGCCAATATTAATGATTTCTAGTGTTTCATTTTTACT
AAATGGTAAATCTTCATTTTTGTCCTTCTTGAATGTGTAATTGGCTTTCACAACATCCCC
AGCTTTGAACCCGCATTCCATCATACGTTCAAAGGTCATAATTTATGGGCACGTCGTTTG
GATTTGCATTTTAGTTGTTTTATACGTTGCTTCCA

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)