cluster # 8095

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Schistosoma mansoni
cluster # 8095 cluster # 8095 Sequences # 6 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8095#0 length = 834 sequences # 3
consensus_8095#1 length = 566 sequences # 1

consensus_8095#2 length = 446 sequences # 1
consensus_8095#3 length = 348 sequences # 1

consensusID : consensus_8095#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 834
fasta sequence

                              [ACGACATCCATAATAACCTTAGTAACTTTATAGGTATCATTACCAAGTTTTGATTTGATAATTTTGAATCAATTGAGCATTGGGTAGATTGTTATAAATAAATTGATATATTTGTAATATCCCAATGAGTAGAAAAATTAGATTTTCTGACGTTTCGTGACTCAGTGTAGGCCACTTCTTCGGAGAATAAATAAACAACCAGTAACTTTAGATTGATTCTAATTAGCTAACTTCAATATCTTTGTTCTGTCATATTCCAACTTCTCTTTGTAGGCATATAGCCGAATAATAGTTGAGGTAGTTTGATAAGTGTTACATCAGCTTTTTACATCCATACCAGTTTCTTCATTAGGAAGTACAATCTTAATACGACCTTTCGAGTGAGCAAAATTGCGGGACTCTATTCAATTCAATGCATCTTGACTGAGGCCAAACTTGGTGTGTTAGTCGTGATCTAGTTGAATTTGTATGTTTGGCTGCTAACTGTTTTCTCTTTCATTGTTGGTTAGTTTAGCGTTGATTCACTCTGAAGCACCCATCCCACAAACGTCTTTGGACACGCATTCATTATTGAGGCTNTGCTTCTGAGTACTTATGTTTAAAATACCGTTTGTCCTCACCAAAGTTTTTATGAATTTTAGATACGTGCATGTGTTTGGAATGATCGTCATTTAGAATTGTATACCTGCGGAGCTGATGGAAATCTGTTTACATGGCCCATTTTTCCTCTTTCAAGCAACAATGTGATTGATGATGATCAATTTTAATTTATACATCTTAGTATTTTGTAAATAAACATGTATAGTGATGATTGAAATCTTATAATTAACCATT]

[+] EMBL CD079886             [ACGACATCCATAATAACCTTAGTAACTTTATAGGTATCATTACCAAGTTTTGATTTGATAATTTTGAATCAATTGAGCATTGGGTAGATTGTTATAAATAAATTGATATATTTGTAATATCCCAATGAGTAGAAAAATTAGATTTTCTGACGTTTCGTGACTCAGTGTAGGCCACTTCTTCGGAGAATAAATAAACAACCAGTAACTTTAGATTGATTCTAATTAGCTAACTTCAATATCTTTGTTCTGTCATATTCCAACTTCTCTTTGTAGGCATATAGCCGAATAATAGTTGAGGTAGTTTGATAAGTGTTACATCAGCTTTTTACATCCATACCAGTTTCTTCATTAGGAAGTACAATCTTAATACGACCTTTCGAGTGAGCAAAATTGCGGGACTCTATTCAATTCAATGCATCTTGACTGAGGCCAAACTTGGTGTGTTAGTCGTGATCTAGTTGAATTTGTATGTTTGGCTGCTAACTGTTTTCTCTTTCATTGTTGGTTAGTTTAGCGTTGATTCACTCTGAAGCACCCATCCCACAAACGTCTTTGGACACGCATTCATTATTGAGGCTNTGCTTCTGAGTACTTATGTTTAAAATACCGTTTGTCCTCACCAAAGTTTTTATGAATTTTAGATACGTGCATGTGTTTGGAATGATCGTCATTTAGAATTGTATACCTGCGGAGCTGATGGAAATCTGT                                                                                                                              ]
[-] EMBL CD069519             [                                                    ATTTGATAATTTTGAATCAATTGAGCATTGGGTAGATTGTTATAAATAAATTGATATATTTGTAATATCCCAATGAGTAGAAAAATTAGATTTTCTGACGTTTCGTGACTCAGTGTAGGCCACTTCTTCGGAGAATAAATAAACAACCAGTAACTTTAGATTGATTCTAATTAGCTAACTTCAATATCTTTGTTCTGTCATATTCCAACTTCTCTTTGTAGGCATATAGCCGAATAATAGTTGAGGTAGTTTGATAAGTGTTACATCAGCTTTTTACATCCATACCAGTTTCTTCATTAGGAAGTACAATCTTAATACGACCTTTCGAGTGAGCAAAATTGCGGGACTCTATTCAATTCAATGCATCTTGACTGAGGCCAAACTTGGTGTGTTAGTCGTGATCTAGTTGAATTTGTATGTTTGGCTGCTAACTGTTTTCTCTTTCATTGTTGGTTAGTTTAGCGTTGATTCACTCTGAAGCACCCATCCCACAAACGT                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD074083             [                                                                                                                                                                                                                                                           ATATTCCAACTTCTCTTTGTAGGCATATAGCCGAATAATAGTTGAGGTAGTTTGATAAGTGTTACATCAGCTTTTTACATCCATACCAGTTTTTTCATTAGGAAGTACAATCTTAATACGACCTTTCGAGTGAGCAAAATTGCGGGACTTTATTCAATTCAATGCATCTTGACTGAGGCCAAACTTGGTGTGTTAGTCGTGATCTAGTTGAATTTGTATGTTTGGCTGCTAACTGTTTTCTCTTTCATTGTTGGTTAGTTTAGCGTTGATTCACTTTGAAGCACCCATCCCACAAACGTCTTTGGACACGCATTCATTATTGAGGCTTTGCTTTTGAGTACTTATGTTTAAAATACCGTTTGTCCTCACCAAAGTTTTTATGAATTTTAGATACGTGCATGTGTTTGGAATGATCGTCATTTAGAATTGTATACCTGCGGAGCTGATGGAAATCTGTTTACATGGCCCATTTTTCCTCTTTCAAGCAACAATGTGATTGATGATGATCAATTTTAATTTATACATCTTAGTATTTTGTAAATAAACATGTATAGTGATGATTGAAATCTTATAATTAACCATT]




>consensus_8095#0
ACGACATCCATAATAACCTTAGTAACTTTATAGGTATCATTACCAAGTTTTGATTTGATA
ATTTTGAATCAATTGAGCATTGGGTAGATTGTTATAAATAAATTGATATATTTGTAATAT
CCCAATGAGTAGAAAAATTAGATTTTCTGACGTTTCGTGACTCAGTGTAGGCCACTTCTT
CGGAGAATAAATAAACAACCAGTAACTTTAGATTGATTCTAATTAGCTAACTTCAATATC
TTTGTTCTGTCATATTCCAACTTCTCTTTGTAGGCATATAGCCGAATAATAGTTGAGGTA
GTTTGATAAGTGTTACATCAGCTTTTTACATCCATACCAGTTTCTTCATTAGGAAGTACA
ATCTTAATACGACCTTTCGAGTGAGCAAAATTGCGGGACTCTATTCAATTCAATGCATCT
TGACTGAGGCCAAACTTGGTGTGTTAGTCGTGATCTAGTTGAATTTGTATGTTTGGCTGC
TAACTGTTTTCTCTTTCATTGTTGGTTAGTTTAGCGTTGATTCACTCTGAAGCACCCATC
CCACAAACGTCTTTGGACACGCATTCATTATTGAGGCTNTGCTTCTGAGTACTTATGTTT
AAAATACCGTTTGTCCTCACCAAAGTTTTTATGAATTTTAGATACGTGCATGTGTTTGGA
ATGATCGTCATTTAGAATTGTATACCTGCGGAGCTGATGGAAATCTGTTTACATGGCCCA
TTTTTCCTCTTTCAAGCAACAATGTGATTGATGATGATCAATTTTAATTTATACATCTTA
GTATTTTGTAAATAAACATGTATAGTGATGATTGAAATCTTATAATTAACCATT

consensusID : consensus_8095#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 566
fasta sequence

                              [GAATGATAATGAAATTACGTCTTGGAAACTCTACTGATCATTCATTGTTGTCATTTTGTTTTTGTTTTTTGCTTTTTCTCGCTTTTCTTCCCTTTAAAATTGTCCTCCCTAACCATGTTTTACAATAGGACTCATTTATTTTGTGTTAAATTTCATAATACTACTGATATAGAAATCAATAGTTGAATAATGCTATAAAAGAATTTGTCCATTACGAAACATTGATCGATTATTTGAATAGGTGTTATGATCTGTTGAACGTTTAAAAGGTTAGTGGGATCAAATCTATGCTATTGATTTAGTTACCATATTTCAGATGTAGACTTTTCATTAAATAGATAATGATTGACGTGAAAACCAAGCACTTTATGATTAAGATATGAATATAATTATTATATCCTGAAGAGGATTATGAATGGTAACTTTTGAGGACTATTTATGGACTAATATGATATGTATATTACCTATTGTATAATTGTTAAGTAACTCAATTATTCACATTCACGTCCCTCTTATTATAAGCTNTATTTTGACCCATAGACTATTATTATACGATTTACCACNTC]

[+] EMBL CD189639             [GAATGATAATGAAATTACGTCTTGGAAACTCTACTGATCATTCATTGTTGTCATTTTGTTTTTGTTTTTTGCTTTTTCTCGCTTTTCTTCCCTTTAAAATTGTCCTCCCTAACCATGTTTTACAATAGGACTCATTTATTTTGTGTTAAATTTCATAATACTACTGATATAGAAATCAATAGTTGAATAATGCTATAAAAGAATTTGTCCATTACGAAACATTGATCGATTATTTGAATAGGTGTTATGATCTGTTGAACGTTTAAAAGGTTAGTGGGATCAAATCTATGCTATTGATTTAGTTACCATATTTCAGATGTAGACTTTTCATTAAATAGATAATGATTGACGTGAAAACCAAGCACTTTATGATTAAGATATGAATATAATTATTATATCCTGAAGAGGATTATGAATGGTAACTTTTGAGGACTATTTATGGACTAATATGATATGTATATTACCTATTGTATAATTGTTAAGTAACTCAATTATTCACATTCACGTCCCTCTTATTATAAGCTNTATTTTGACCCATAGACTATTATTATACGATTTACCACNTC]




>consensus_8095#1
GAATGATAATGAAATTACGTCTTGGAAACTCTACTGATCATTCATTGTTGTCATTTTGTT
TTTGTTTTTTGCTTTTTCTCGCTTTTCTTCCCTTTAAAATTGTCCTCCCTAACCATGTTT
TACAATAGGACTCATTTATTTTGTGTTAAATTTCATAATACTACTGATATAGAAATCAAT
AGTTGAATAATGCTATAAAAGAATTTGTCCATTACGAAACATTGATCGATTATTTGAATA
GGTGTTATGATCTGTTGAACGTTTAAAAGGTTAGTGGGATCAAATCTATGCTATTGATTT
AGTTACCATATTTCAGATGTAGACTTTTCATTAAATAGATAATGATTGACGTGAAAACCA
AGCACTTTATGATTAAGATATGAATATAATTATTATATCCTGAAGAGGATTATGAATGGT
AACTTTTGAGGACTATTTATGGACTAATATGATATGTATATTACCTATTGTATAATTGTT
AAGTAACTCAATTATTCACATTCACGTCCCTCTTATTATAAGCTNTATTTTGACCCATAG
ACTATTATTATACGATTTACCACNTC

consensusID : consensus_8095#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 446
fasta sequence

                              [AACTACTCATATTCATGTCCCTCTTATTATAAGCTTTATTTTGACCTATAGACTATTATTATACGACTTACCGTTCTTGAGTTATCCTCAGTCTATCAATTACTATCTCCCTTATTCACAGCCACGTTTGGTTAAATCACGTACAAATGTTGTTTTCTATTTTATGGTAAGATGTGATCTGTCTGGTTGGTATATAAACTCAGTAATGTTTGAAATAAATAATTCATATCTCGGAGGCTGTTATTGGGGTTCTGGATTTAATAGACAAAGCTAGGCGGGAAGCAAGACCGATAGAGACTCGAGACTGCTCGTACGGGTTTTGTGTGTCATTGGTACAATCAATAATTCACTTTATTCTAATTGGCGGCATCATCACGTCATATATTAATTGGGGAACCAATCCACAAGATATAACAATTATATTGTTACTAGTACTAATTAACAAC]

[+] EMBL CD115229             [AACTACTCATATTCATGTCCCTCTTATTATAAGCTTTATTTTGACCTATAGACTATTATTATACGACTTACCGTTCTTGAGTTATCCTCAGTCTATCAATTACTATCTCCCTTATTCACAGCCACGTTTGGTTAAATCACGTACAAATGTTGTTTTCTATTTTATGGTAAGATGTGATCTGTCTGGTTGGTATATAAACTCAGTAATGTTTGAAATAAATAATTCATATCTCGGAGGCTGTTATTGGGGTTCTGGATTTAATAGACAAAGCTAGGCGGGAAGCAAGACCGATAGAGACTCGAGACTGCTCGTACGGGTTTTGTGTGTCATTGGTACAATCAATAATTCACTTTATTCTAATTGGCGGCATCATCACGTCATATATTAATTGGGGAACCAATCCACAAGATATAACAATTATATTGTTACTAGTACTAATTAACAAC]




>consensus_8095#2
AACTACTCATATTCATGTCCCTCTTATTATAAGCTTTATTTTGACCTATAGACTATTATT
ATACGACTTACCGTTCTTGAGTTATCCTCAGTCTATCAATTACTATCTCCCTTATTCACA
GCCACGTTTGGTTAAATCACGTACAAATGTTGTTTTCTATTTTATGGTAAGATGTGATCT
GTCTGGTTGGTATATAAACTCAGTAATGTTTGAAATAAATAATTCATATCTCGGAGGCTG
TTATTGGGGTTCTGGATTTAATAGACAAAGCTAGGCGGGAAGCAAGACCGATAGAGACTC
GAGACTGCTCGTACGGGTTTTGTGTGTCATTGGTACAATCAATAATTCACTTTATTCTAA
TTGGCGGCATCATCACGTCATATATTAATTGGGGAACCAATCCACAAGATATAACAATTA
TATTGTTACTAGTACTAATTAACAAC

consensusID : consensus_8095#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 348
fasta sequence

                              [AACCGCGTCATTCTTGAATGTAAGATGCTCGGAATGACTCCTGCGACTTCGCATACGGTCCGAATGGCATAATAATGAGTTGCTACTGACTTAACACTCTCAGGTATTATTAGATCGTCTGCATCCTGAAAATTATTATTGCCATCTCTTCGACCATATTGTCTTGGACCCTGACGATCTGATCCATCCTGATTTTCGAAGTCTCAATTTGAATTGAATGGCATCTCACGACCTCGACCAAACATTCCTCTTCCTCTGCCTCTCCCACGTCCTCTAGGCTCAAAGCTTGACCCTCTGNGAGCATTNCAATCACTCACTGAATCTTGAAGTGCTTCTGTCGGAGCTATT]

[+] EMBL CD198322             [AACCGCGTCATTCTTGAATGTAAGATGCTCGGAATGACTCCTGCGACTTCGCATACGGTCCGAATGGCATAATAATGAGTTGCTACTGACTTAACACTCTCAGGTATTATTAGATCGTCTGCATCCTGAAAATTATTATTGCCATCTCTTCGACCATATTGTCTTGGACCCTGACGATCTGATCCATCCTGATTTTCGAAGTCTCAATTTGAATTGAATGGCATCTCACGACCTCGACCAAACATTCCTCTTCCTCTGCCTCTCCCACGTCCTCTAGGCTCAAAGCTTGACCCTCTGNGAGCATTNCAATCACTCACTGAATCTTGAAGTGCTTCTGTCGGAGCTATT]




>consensus_8095#3
AACCGCGTCATTCTTGAATGTAAGATGCTCGGAATGACTCCTGCGACTTCGCATACGGTC
CGAATGGCATAATAATGAGTTGCTACTGACTTAACACTCTCAGGTATTATTAGATCGTCT
GCATCCTGAAAATTATTATTGCCATCTCTTCGACCATATTGTCTTGGACCCTGACGATCT
GATCCATCCTGATTTTCGAAGTCTCAATTTGAATTGAATGGCATCTCACGACCTCGACCA
AACATTCCTCTTCCTCTGCCTCTCCCACGTCCTCTAGGCTCAAAGCTTGACCCTCTGNGA
GCATTNCAATCACTCACTGAATCTTGAAGTGCTTCTGTCGGAGCTATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8095#1      ------------------------------------------------------------
consensus_8095#2      ------------------------------------------------------------
consensus_8095#0      ACGACATCCATAATAACCTTAGTAACTTTATAGGTATCATTACCAAGTTTTGATTTGATA 60
consensus_8095#3      ------------------------------------------------------------
                                                                                  

consensus_8095#1      ---------GAATGATAATGAAATTACGTCTTGGAAACTCTACTGATCATTCATTGTTGT 51
consensus_8095#2      ------------------------------------------------------------
consensus_8095#0      ATTTTGAATCAATTGAGCATTGGGTAGATTGTTATAAATAAATTGATATATTTGTAATAT 120
consensus_8095#3      -------------------------------------------------AACCGCGTCAT 11
                                                                                  

consensus_8095#1      CATTTTGTTTTTGTTTTTTGCTTTTTCTCGCTTTTCTTCCCTTTAAAATTGTCCTCCCTA 111
consensus_8095#2      -------------AACTACTCATATTCATGTCCCTCTTATTATAAGCTTTATTTTGACCT 47
consensus_8095#0      CCCAATGAGTAGAAAAATTAGATTTTCTGACGTTTCGTGAC-TCAGTGTAGGCCACTTCT 179
consensus_8095#3      TCTTGAATGTAAGATGCTCGGAATGACTCCTGCGACTTCGCATACGGTCCGAATGGCATA 71
                                                *        * *    *                 

consensus_8095#1      ACCATGTTTTACAATAGGACTCATTTATTTTGTGTTAAATTTCATAATACTACTGATATA 171
consensus_8095#2      ATAGACTATTATTATACGACTTACCGTTCTTGAGTTA----TCCTCAGTCTATCAATTAC 103
consensus_8095#0      TCGGAGAATAAATAAACAAC-CAGTAACTTTAGATTGATTCTAATTAGCTAACTTCAATA 238
consensus_8095#3      ATAATGAGTTGCTAC-TGACTTAACACTCTCAGGTA-----TTATTAGATCGTCTGCATC 125
                              *    *    **  *      *    *      *  * *             

consensus_8095#1      GAAATCAATAGTTGAATAATGCTATAAAAGAATTTGTCCATTACGAAACATTGATCGAT- 230
consensus_8095#2      TATCTCCCTTATT---CACAGCCACGTTTGGTTAAATCACGTAC-AAATGTTG-TTTTC- 157
consensus_8095#0      TCTTTGTTCTGTCATATTCCAACTTCTCTTTGTAGGCATATAGCCGAATAATAGTTGAGG 298
consensus_8095#3      C-TGAAAATTATT----ATTGCCATCTCTTCGACCATATTGTCTTGGACCCTG-ACGATC 179
                                 *                                   *   *        

consensus_8095#1      TATTTGAATAGGTGTTATGATCTGTTGAAC--GTTTAAAA-GGTTAGTGGGATCAAATCT 287
consensus_8095#2      TATTTTATGGTAAGATGTGATCTGTCTGGTTGGTATATAA-ACTCAGTAATGTTTGAAAT 216
consensus_8095#0      TAGTTTGATAAGTGTTAC-ATCAGCTTTTTACATCCATACCAGTTTCTTCATTAGGAAGT 357
consensus_8095#3      TGATCCATCCTGATTTTCGAAGTCTCAATTTGAATTGAATGGCATCTCACGACCTCGACC 239
                      *  *           *   *                  *                     

consensus_8095#1      ATGCTATTGATTTAGTTACC---ATATTTCAGATGTAGACTTTTCATTAAATA-GATAAT 343
consensus_8095#2      AAATAATTCAT---ATCTCG---GAGGCTGTTATTGGGGTTCTGGATTTAATA-GACAAA 269
consensus_8095#0      ACAATCTTAATACGACCTTTCGAGTGAGCAAAATTGCGGGACTCTATTCAATTCAATGCA 417
consensus_8095#3      AAACATTCCTCT---TCCTC----TGCCTCTCCCACGTCCTCTAGGCTCAAAG-CTTGAC 291
                      *     *                                   *    * **         

consensus_8095#1      GATTGACGTGAAAACCAAGCACTTTATGATTAAGAT--ATGAATATAATTATTATATCCT 401
consensus_8095#2      GCTAGGCG-GGAAGCAAGAC------CGATAGAGAC--TCGAGACTGCTCGTACGGGTTT 320
consensus_8095#0      TCTTGACT--GAGGCCAAACTTGGTGTGTTAGTCGTGATCTAGTTGAATTTGTATGTTTG 475
consensus_8095#3      CCTCTGNGAGCATTNCAATCAC----TCACTGAATC--TTGAAGTGCTTCTGTCGGAGCT 345
                        *        *    *  *                     *      *           

consensus_8095#1      GAAGAGGATTATGAATGGTAACTTTTGAGGACTATTTATGGACTAATATGATATGTATAT 461
consensus_8095#2      TGTG-----TGTCATTGGTA-CAATCAATAATTCACTTTATTCTAAT-TGGCGGCATCAT 373
consensus_8095#0      GCTGCTAACTGTTTTCTCTT-TCATTGTTGGTTAGTTTAGCGTTGATTCACTCTGAAGCA 534
consensus_8095#3      ATT--------------------------------------------------------- 348
                                                                                  

consensus_8095#1      TACCTATTGTATAATTGTTAAGTAACTCAATTATTCACATTCACGTCCCTCTTATTATAA 521
consensus_8095#2      CAC--GTCATATATTAATTGGGGAACCAATCCACAAGATATAACAATTATATTGTTACTA 431
consensus_8095#0      CCCATCCCACAAACGTCTTTGGACACGCATTCATT---ATTGAGGCTNTGCTTCTGAGTA 591
consensus_8095#3      ------------------------------------------------------------
                                                                                  

consensus_8095#1      GCTNTATTTTGAC--CCATAGACTATTATTATACGATTTACCACNTC------------- 566
consensus_8095#2      GTACTAATTAACA--AC------------------------------------------- 446
consensus_8095#0      CTTATGTTTAAAATACCGTTTGTCCTCACCAAAGTTTTTATGAATTTTAGATACGTGCAT 651
consensus_8095#3      ------------------------------------------------------------
                                                                                  

consensus_8095#1      ------------------------------------------------------------
consensus_8095#2      ------------------------------------------------------------
consensus_8095#0      GTGTTTGGAATGATCGTCATTTAGAATTGTATACCTGCGGAGCTGATGGAAATCTGTTTA 711
consensus_8095#3      ------------------------------------------------------------
                                                                                  

consensus_8095#1      ------------------------------------------------------------
consensus_8095#2      ------------------------------------------------------------
consensus_8095#0      CATGGCCCATTTTTCCTCTTTCAAGCAACAATGTGATTGATGATGATCAATTTTAATTTA 771
consensus_8095#3      ------------------------------------------------------------
                                                                                  

consensus_8095#1      ------------------------------------------------------------
consensus_8095#2      ------------------------------------------------------------
consensus_8095#0      TACATCTTAGTATTTTGTAAATAAACATGTATAGTGATGATTGAAATCTTATAATTAACC 831
consensus_8095#3      ------------------------------------------------------------
                                                                                  

consensus_8095#1      ---
consensus_8095#2      ---
consensus_8095#0      ATT 834
consensus_8095#3      ---