cluster # 8191

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Schistosoma mansoni
cluster # 8191 cluster # 8191 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8191#0 length = 563 sequences # 6

consensusID : consensus_8191#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 563
fasta sequence

                              [TAATTCAGAAGTTAATGAAAAGACTTACACCTCTACTGTTGTTTCTTCATCTGATAATTCTTCAGAGTTGATGAATAAGAATTCTTCAAATGATGCAGTAATTGAAGTTAGTGAAAATGAGGAAGATGGAGA-GTGTGTTTGGGAGGTAGCGTCAAGTTTACCACCTGGGACATTTACTCGTATTTATCCAAATCAGTATGTTTTTCCTGG-CGCTGA-AATATATTTAGAG-AGTAAACCCG-GTGAAGTAACGATCTCATGTAATGCCTCAGATATCTCTATTACGTCGAATGCGTCATCATCATCGTCAGCATCATCTACTTCCGGTCATAATGATGACTTAGATCA-GTTAAGAGATTCACTTAAAGATGAATCTGTTTCCATTGATATAACTGAAAAAGAAGAGTCCAGTATTCATTCATCTGATTCACGTAAATCTTTAAAACGGCATAATTCCAATGAGAATCTGTCTTTGAATAAACAATCATCGTTAAAACAACCTCGTTCTATGTAAAAAAAAATAATTACAAAACATAAAAGTAAAGTGGAAGACATGGAAATCATTC]

[+] EMBL CD119775             [TAATTCAGAAGTTAATGAAAAGACTTACACCTCTACTGTTGTTTCTTCATCTGATAATTCTTCAGAGTTGATGAATAAGAATTCTTCAAATGATGCAGTAATTGAAGTTAGTGAAAATGAGGAAGATGGAGA GTGTGTTTGGGAGGTAGTGTCAAGTTTACCACCTGGGACATTTACTCGTATTTATCCAAATCAGTATGTTTTTCCTGG CGCTGA AATATATTTAGAG AGTAAACCCG GTGAAGTAACGATCTCATGTAATGCCTCAGATATCTCTATTACGTCGAATGCGTCATCATCATCGTCAGCATCATCTACTTCCGGTCATAATGATGACTTAGATCA GTTAAGAGATCCACTTAAAGATGAATCTGTTTCCATTGATATAACTGAAAAAGAAGAGTCCAGTATTCATTCATCTGATTCACGTAAATCTTTAAAACGGCATAATTCCAATGAGAATCTGTCTTTGAATAAACAATCATCGTTAAAACAACCTCGTTCTATGTAAAAAAAAATAATTACAAAACATAAAAGTAAAGTGGAAGACATGGAAATCATT ]
[+] EMBL CD153095             [                                                  CTGATAATTCTTCAGAGTTGATGAATAAGAATTCTTCAAATGATGCAGTAATTGAAGTTAGTGAAGATGAGGAGGATGGAGA GTGTGTTTGGGAGGTAGCGTCAAGTTTACCACCTGGGACATTTACTCGTATTTATCCAAATCAGTATGTTTTTCCTGG CGCTGA AATATATTTAGAG AGTAAACCCG GTGAAGCAACGATCTCATGTAATGCCTCAGATATCTCTATTACGTCGAATGCGTCATCATCATCGTCAGCATCATCTACTTCCGGTCATAATGATGACTTAGATCA GTTAAGAGATTCACTTAAAGATGAATCTGTTTCCATTGATATAACTGAAAAAGAAGAGTCCAGTATTCATTCATCTGATTCACGTAAATCTTTAAAACGGCATAATTCCAATGAGAATCTGTCTTTGAATAAACAATCATCGTTAAAACAACCTCGTTCTATGT AAAAAAAATAATTACAAAACATANAAGTAAAGTGGAAGACAT           ]
[-] EMBL CD119861             [                                                                    TGATGAATAAGAATTCTTCAAATGATGCAGTAATTGAAGTTAGTGAAAATGAGGAAGATGGAGA GTGTGTTTGGGAGGTAGCGTCAAGTTTACCACCTGGGACATTTACTCGTATTTATCCAAATCAGTATGTTTTTCCTGG CGCTGA AATATATTTAGAG AGTAAACCCG GTGAAGTAACGATCTCATGTAATGCCTCAGATATCTCTATTACGTCGAATGCGTCATCATCATCGTCAGCATCATCTACTTCCGGTCATAATGATGACTTAGATCA GTTAAGAGATTCACTTAAAGATGAATCTGTTTCCATTGATATAACTGAAAAAGAAGAGTCCAGTATTCATTCATCTGATTCACGTAAATCTTTAAAACGGCATAATTCCAATGAGAATCTGTCTTTGAATAAACAATCATCGTTAAAACAACCTCGTTCTATGT AAAAAAAATAATTACAAAACATAAAAGTAAAGTGGAAGACATGGAAATCATTC]
[-] EMBL CD119863             [                                                                                                                             ATGGAGA GTGTGTTTGGGAGGTAGCGTCAAGTTTACCACCTGGGACATTTACTCGTATTTATCCAAATCAGTATGTTTTTCCTGG CGCTGA AATATATTTAGAG AGTAAACCCG GTGAAGTAACGATCTCATGTAATGCCTCAGATATCTCTATTACGTCGAATGCGTCATCATCATCGTCAGCATCATCTACTTCCGGTCATAATGATGACTTAGATCA GTTAAGAGATTCACTTAAAGATGAATCTGTTTCCATTGATATAACTGAAAAAGAAGAGTCCAGTATTCATTCATCTGATTCACGTAAATCTTTAAAACGGCATAATTCCAATGAGAATCTGTCTTTGAATAAACAATCATCGTTAAAACAACCTCGTTCTATGTAAAAAAAAATAATTACAAAACATAAAAGTAAAGTGGAAGACATGGAAATCATTC]
[+] EMBL CD069215             [                                                                                                                                 AGACGTGTGTTCGGGAGGTAGCGTCAAGTTTACCACCTGGGACATTTACTCGTATTTATCCAAATCAGTATGTTTTTCCTGGACGCTGACAATATATTTAGAGAAGTCAACCCGCGTGAAGCAACGATCTCATGTAATGCCTCAGATATCTCTATTACGTCGAATGCGTCATCATCATCGTCAGCATCATCTACTTCCGGTCATAATGATGACTTAGATCACGTTAAGAGATTCACTTAAAGATGAATCTGTTTCCATTGATATAACTGAAAAAGAAGAGTCCAGTATTCATTCATCTGATTCACGTAAATCTTTAAAA                                                                                                                         ]
[+] EMBL CD069340             [                                                                                                                                 AGA GTGTGTTTGGGAGGTAGCGTCAAGTTTACCACCTGGGACATTTACTCGTATTTATCCAAATCAGTATGTTTTTCCTGG CGCTGA AATATATTTAGAG AGTAAACCCG GTGAAGCAACGATCTCATGTAATGCCTCAGATATCTCTATTACGTCGAATGCGTCATCATCATCGTCAGCATCATCTACTTCCGGTCATAATGATGACTTAGATCA GTTAAGAGATTCACTTAAAGATGAATCTGTTTCCATTGATATAACTGAAAAAGAAGAGTCCAGTATTCATTCATCTGATTCACGTAAAT                                                                                                                                 ]




>consensus_8191#0
TAATTCAGAAGTTAATGAAAAGACTTACACCTCTACTGTTGTTTCTTCATCTGATAATTC
TTCAGAGTTGATGAATAAGAATTCTTCAAATGATGCAGTAATTGAAGTTAGTGAAAATGA
GGAAGATGGAGAGTGTGTTTGGGAGGTAGCGTCAAGTTTACCACCTGGGACATTTACTCG
TATTTATCCAAATCAGTATGTTTTTCCTGGCGCTGAAATATATTTAGAGAGTAAACCCGG
TGAAGTAACGATCTCATGTAATGCCTCAGATATCTCTATTACGTCGAATGCGTCATCATC
ATCGTCAGCATCATCTACTTCCGGTCATAATGATGACTTAGATCAGTTAAGAGATTCACT
TAAAGATGAATCTGTTTCCATTGATATAACTGAAAAAGAAGAGTCCAGTATTCATTCATC
TGATTCACGTAAATCTTTAAAACGGCATAATTCCAATGAGAATCTGTCTTTGAATAAACA
ATCATCGTTAAAACAACCTCGTTCTATGTAAAAAAAAATAATTACAAAACATAAAAGTAA
AGTGGAAGACATGGAAATCATTC

clustalw multiple alignements is not computed in this case