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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8193#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1015 fasta sequence
[ATGCTTGAAATCTTCTATGGTAAAAGTCTTCCTTACAAGCAAACAGGGCG-AAAAAAAACACTTGCTTTGCAAGCTTGAGGACTTATGTCAGTCTGTAGAACTGACATATTTAAAAAACCAAAGCAACAACAGCAGAAAAAGAAAAGAGTACCTGCTTCACAGGGTTAGCCTAGTCTAACAAATGAGAAATGCTATAGTTCCATACGACGATTACCAGACTTGTCTTCTGTAATAAGATAGTGTACATTTCATTTTCTTCAGAGGACAAGATACACCAGTTGAGAACATTTGGATTGTTCAATAAATGATGAACTGTGAAGGATGCAGTATTTTTGTACTCTACTCATTTCACACACGTTATTTAAATAAAACCCCATCAGGAGCTGGAGAGACGGCTCAGCAGTGAAGAGCACTTGCTCCTTTTTCCAGAGGTTACAGTTTGTCTCTCAGTGCCTACGAGGTGGCACACAGCCACCTGGAACTCCAGTGCAGGGGATCCAGTGCCTGTTCTGGCCTCTGAGGTCACCAGGCATGCAGGCAGTGCACTTAAACAAATGCAGGCAAAACACTCACACATAAAATTAAAACAACTAATGAAATAATTAATTATTAATGAATGAAATAAAATCCCATCAGAGCGACAGACCTTTGGAAGAAGGAAATACGGGTATCTTCTTGCTAGCAAGAGACTCAACTGTCTGAGTTGAGAAGCCAAGCCAGCAAATGGAAGGGGTGTGACTGAGTCTTATTAAATACACAGATAATTTCTACCCATGGTGAAAAGTCTGGTTCTGCTCTGTGATAGCTGAGACAGATTCATTGTTTTATTGTGTGGCCTGCCCATTGCTTCCTAGCATTTGACAATGAACATGTAATCTTTGCAGTAATAATACAATTGGGAATTTCAGATCTGCCCCTATGACAGCATCTCTTTGCAGTTTTCAAGGAGAACCACTAATATGGAGCTTCTCAGAGATGATGAAACATGGTGCTCGGAGTCAAGTCATCCCTCTAA]
[+] EMBL CD085142 [ATGCTTGAAATCTTCTATGGTAAAAGTCTTCCTTACAAGCAAACAGGGCG AAAAAAAACACTTGCTTTGCAAGCTTGAGGACTTATGTCAGTCTGTAGAACTGACATATTTAAAAAACCAAAGCAACAACAGCAGAAAAAGAAAAGAGTACCTGCTTCACAGGGTTAGCCTAGTCTAACAAATGAGAAATGCTATAGTTCCATACGACGATTACCAGACTTGTCTTCTGTAATAAGATAGTGTACATTTCATTTTCTTCAGAGGACAAGATACACCAGTTGAGAACATTTGGATTGTTCAATAAATGATGAACTGTGAAGGATGCAGTATTTTTGTACTCTACTCATTTCACACACGTTATTTAAATAAAACCCCATCAGGAGCTGGAGAGACGGCTCAGCAGTGAAGAGCACTTGCTCCTTTTTCCAGAGGTTACAGTTTGTCTCTCAGTGCCTACGAGGTGGCACACAGCCACCTGGAACTCCAGTGCAGGGGATCCAGTGCCTGTTCTGGCCTCTGAGGTCACCAGGCATGCAGGCAGTGCACTTAAACAAATGCAGGCANAACACTCACACATAAAATTAAAACAA ]
[+] EMBL CD085096 [ATGCTTGAAATCTTCTATGGTAAAAGTCTTCCTTACAAGCAAACAGGGCG AAAAAAAACACTTGCTTTGCAAGCTTGAGGACTTATGTCAGTCTGTAGAACTGACATATTTAAAAAACCAAAGCAACAACAGCAGAAAAAGAAAAGAGTACCTGCTTCACAGGGTTAGCCTAGTCTAACAAATGAGAAATGCTATAGTTCCATACGACGATTACCAGACTTGTCTTCTGTAATAAGATAGTGTACATTTCATTTTCTTCAGAGGACAAGATACACCAGTTGAGAACATTTGGATTGTTCAATAAATGATGAACTGTGAAGGATGCAGTATTTTTGTACTCTACTCATTTCACACACGTTATTTAAATAAAACCCCATCAGGAGCTGGAGAGACGGCTCAGCAGTGAAGAGCACTTGCTCCTTTTTCCAGAGGTTACAGTTTGTCTCTCAGTGCCTACGAGGTGGCACACAGCCACCTGGAACTCCAGTGCAGGGGATCCAGTGCCTGTTCTGGCCTCTGAGGTCACCAGGCATGCAGGCAGTGCACTTAAACANATGCAGGCAAAACACTCACACA ]
[+] EMBL CD085274 [ATGCTTGAAATCTTCTATGGTAAAAGTCTTCCTTACAAGCAAACAGGGCG AAAAAAAACACTTGCTTTGCAAGCTTGAGGACTTATGTCAGTCTGTAGAACTGACATATTAAAAAAACCAAAGCAACAACAGCAGAAAAAGAAAAGAGTACCTGCTTCACAGGGTTAGCCTAGTCTAACAAATGAGAAATGCTATAGTTCCATACGACGATTACCAGACTTGTCTTCTGTAATAAGATAGTGTACATTTCATTTTCTTCAGAGGACAAGATACACCAGTTGAGAACATTTGGATTGTTCAATAAATGATGAACTGTGAAGGATGCAGTATTTTTGTACTCTACTCATTTCACACACGTTATTTAAATAAAACCCCATCAGGAGCTGGAGAGACGGCTCAGCAGTGAAGAGCACTTGCTCCTTTTTCCAGAGGTTACAGTTTGTCTCTCAGTGCCTACGAGGTGGCACACAGCCACCTGGAACTCCAGTGCAGGGGATCCAGTGCCTGTTCTGGCCTCTGAGGTCACCAGGCATGCAGGCAGTGCACTTAAACAAATGCAGGCNAAACACTCACA ]
[+] EMBL CD085071 [ATGCTTGAAATCTTCTATGGTAAAAGTCTTCCTTACAAGCAAACAGGGCGAAAAAAAAACACTTGCTTTGCAAGCTTGAGGACTTATGTCAGTCTGTAGAACTGACATATTTAAAAAACCAAAGCAACAACAGCAGAAAAAGAAAAGAGTACCTGCTTCACAGGGTTAGCCTAGTCTAACAAATGAGAAATGCTATAGTTCCATACGACGATTACCAGACTTGTCTTCTGTAATAAGATAGTGTACATTTCATTTTCTTCAGAGGACAAGATACACCAGTTGAGAACATTTGGATTGTTCAATAAATGATGAACTGTGAAGGATGCAGTATTTTTGTACTCTACTCATTTCACACACGTTATTTAAATAAAACCCCATCAGGAGCTGGAGAGACGGCTCAGCAGTGAAGAGCACTTGCTCCTTTTTCCAGAGGTTACAGTTTGTCTCTCAGTGCCTACGAGGTGGCACACAGCCACCTGGAACTCCAGTGCAGGGGATCCAGTGCCTGTTCTGGCCTCTGAGGTCACCAGGCATGCAGGCAGTGCACTT AAC AATGCAGGC AAACACTCACAC ]
[+] EMBL CD085265 [ATGCTTGAAATCTTCTATGGTAAAAGTCTTCCTTACAAGCAAACAGGGCG AAAAAAAACACTTGCTTTGCAAGCTTGAGGACTTATGCCAGTCTGTAGAACTGACATATTTAAAAAACCAAAGCAACAACAGCAGAAAAAGAAAAGAGTACCTGCTTCACAGGGTTAGCCTAGTCTAACAAATGAGAAATGCTATAGTTCCATACGACGATTACCAGACTTGTCTTCTGTAATAAGATAGTGTACATTTCATTTTCTTCAGAGGACAAGATACACCAGTTGAGAACATTTGGATTGTTCAATAAATGATGAACTGTGAAGGATGCAGTATTTTTGTACTCTACTCATTTCACACACGTTATTTAAATAAAACCCCATCAGGAGCTGGAGAGACGGCTCAGCAGTGAAGAGCACTTGCTCCTTTTTCCAGAGGTTACAGTTTGTCTCTCAGTGCCTACGAGGTGGCACACAGCCACCTGGAACTCCAGTGCAGGGGATCCAGTGCCTGTTCTGGCCTCTGAGGTCACCAGGCATGC ]
[-] EMBL CD085369 [ TGGCACACAGCCACCTGGAACTCCAGTGCAGGGGATCCAGTGCCTGTTCTGGCCTTTGAGGTCACCAGGCATGCAGGCAGTGCACTTAAACAAATGCAGGCAAAACACTCACACATAAAATTAAAACAACTAATGAAATAATTAATTATTAATGAATGAAATAAAATCCCATCAGAGCGACAGACCTTTGGAAGAAGGAAATACGGGTATCTTCTTGCTAGCAAGAGACTCAACTGTCTGAGTTGAGAAGCCAAGCCAGCAAATGGAAGGGGTGTGACTGAGTCTTATTAAATACACAGATAATTTCTACCCATGGTGAAAAGTCTGGTTCTGCTCTGTGATAGCTGAGACAGATTCATTGTTTTATTGTGTGGCCTGCCCATTGCTTCCTAGCATTTGACAATGAACATGTAATCTTTGCAGTAATAATACAATTGGGAATTTCAGATCTGCCCCTATGACAGCATCTCTTTGCAGTTTTCAAGGAGAACCACTAATATGGAGCTTCTCAGAGATGATGAAACATGGTGCTCGGAGTCAAGTCATCCCTCTAA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||