cluster # 8218

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Schistosoma mansoni
cluster # 8218 cluster # 8218 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8218#0 length = 1171 sequences # 6
consensusID : consensus_8218#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1171
fasta sequence
                              [CTGACGTTGGTAATGACTGACTGAATACTAACCAGCCACTTGTCTTCCTTACAGGAGAAGTGTTTCCTTAACGAGTATACGGATCGGTAATAGGTTACTGAGTTACATTACCGTTATTATTGTTGTTTCTTAGACCCTTGATCGCTGTACACTGTTTAGGTGGATCNNNNNNNNNNNNNNNNNNNNNNNNCCCAGTTTTACCTTTGATTTTAAGATTGACGCGTTATTTTGAGAGATTGTCAAACATTCACTTCCCTAGCTTTGAATTGTTTTGAACTAAACATACTTGGCTTCTGCATACTGTATAATTGATAATTTATNNNNNNNNNNNNNNNNNNNNNTCTAATTTTGCTTGCAAAGGTGATGTTCTCACATTTTTTGAGAAAGAGAATAGACCTTTTAGCGTTATTGATGTGTGTAATGCTTTAAAGAATTATGGAAAAACGGGTATTTCTAGAGCTCTGGATGATCTTGTTGAAGAAGGTTCAATTAAAGAGAAANNNNATGGAAAGCAAAAGGTTTATGTTTATGACCAGGTTAACATAACGCACCGAAGTTTATTAATTCATTGTAGAATAAGCTCCCCTCATTCGATGAAAATAAGATTAAAAAGATGGAGGTTCAAAATGCANATTTATCGGTTGAATTAACAGAAGAACAAAAGAAACTGAAAAGTGTCAATGAGGAACTTAAAAGGGTTACCTCTAGTCTTACAAAGGAAGAAGCAGAAAAAGAGCTTACTCAAGTAAAGGAAAAGCTAAAGGAAATCGAAACGGAAGTGAAAGCACTCAAAGCTAAAGGACCAGGGATTACTAAAGCTGACTTGAAATCGGTCTCTGAAAATCATACGAAAATGATCAACGAATGGAAGAAGCGTAAACGTATCGCAATGAATATTGTTGATGCCGTGGCTGAAAGTTATCCTTCCAGCAAGAAA-CAGTTAATGTCTGATATAGGCATAGAAACAGATGAAGACCGTGGGATTACAATACCGACGTAAAATCAAAAGATGGTTATCAGGAAGCCCAAACTTATTTTCTTTATACATATTCTTTTGTTCCGTTTTTACTTCATATCATTGTTTTGTTTTTTTCCAAAGATAAAATTATGGCTAAAAAGAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]

[+] EMBL CD081017             [CTGACGTTGGTAATGACTGACTGAATACTAACCAGCCACTTGTCTTCCTTACAGGAGAAGTGTTTCCTTAACGAGTATACGGATCGGTAATAGGTTACTGAGTTACATTACCGTTATTATTGTTGTTTCTTAGACCCTTGATCGCTGTACACTGTTTAGGTGGATCNNNNNNNNNNNNNNNNNNNNNNNNCCCAGTTTTACCTTTGATTTTAAGATTGACGCGTTATTTTGAGAGATTGTCAAACATTCACTTCCCTAGCTTTGAATTGTTTTGAACTAAACATACTTGGCTTCTGCATACTGTATAATTGATAATTTATNNNNNNNNNNNNNNNNNNNNNTCTAATTTTGCTTGCAAAGGTGATGTTCTCACATTTTTTGAGAAAGAGAATAGACCTTTTAGCGTTATTGATGTGTGTAATGCTTTAAAGAATTATGGAAAAACGGGTATTTCTAGAGCTCTGGATGATCTTGTTGAAGAAGGTTCAATTAAAGAGAAANNNNATGGAAAGCAAAAGGTTTATGTTTATGACCAGGTTAACATAACGCACCGAAGTTTATTAATTCATTGTAGAATAAGCTCCCCTCATTCGATGAAAATAAGATTAAAAAGATGGAGGTTCAAAATGCANATTTATCGGTTGAATTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD074843             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGAAGAAGGTTCAATTAAAGAGAAAGCTTATGGAAAGCAAAAGGTTTATGTTTATGACCAGGTTAACATAACGCACCGAAGTTTATTAATTCATTGTAGAATAAGCTCCCCTCATTCGATGAAAATAAGATTAAAAAGATGGAGGTTCAAAATGCAAATTTATCGGTTGAATTAACAGAAGAACAAAAGAAACTGAAAAGTGTCAATGAGGAACTTAAAAGGGTTACCTCTAGTCTTACAAAGGAAGAAGCAGAAAAAGAGCTTACTCAAGTAAAGGAAAAGCTAAAGGAAATCGAAACGGAAGTGAAAGCACTCAAAGCTAAAGGACCAGGGATTACTAAAGCTGACTTGAAATCGGTCTCTGAAAATCATACGAAAATGATCAACGAATGGAAGAAGCGTAAACGTATCGCAATGAATATTGTTGATGCCGTGGCTGAAAGTTATCCTTCCAGCAAGAAA CAGTTAATGTCTGATATAGGCATAGAAACAGATGAAGACCGTGGGATTACAATACCGACGTAAAATCAAAAGATGGTTATCAGGAAGCCCAAACTTATTTTCTTTATACATATTCTTTTGTTCCGTTTTTACTTCATATCATTGTTTTGTTTTTTTCCAAAGATAAAATTATGGCTAAACAGcgcc                                                ]
[-] EMBL AI975909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAATGAGGAACTTAAAAGGGTTACCTCTAGTCTTACAAAGGAAGAAGCAGAAAAAGAGCTTACTCAAGTAAAGGAAAAGCTAAAGGAATTCGAAACGGAAGTGAAAGCACTCAAAGTTAAAGGACCAGGGATTACTAAAGCTGACTTAAAATCGGTCTCTGAAAATCATTCGAAAATGATCAACGAATGGAACAAGCGTAAACGTATTGCAATGAATATTGTTGATGCCGGGGTTTAAAGTTATCCTTTCAACAAAAAACCAGTTAATGTCTGATATAGGCATAGAACCAGATGAAGCCCGTGGGTTTACAATCCCGAGGTAAAATCAAAAAATGGTTATCAGGAAGCCCAAACTTATTTTCTTAAAACATATTATTTTGTTCCGTTTTAACTTCACACCAGTGTTTTGTTTTTTTCCAAAGATAAATTTATGGCT AAGTCAAAAAAAAAAAAAAAAAAAACATGCCATGAAGCTGCATTACCGTATTGCGTA]
[-] EMBL AI975737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGAAAGCACTCAAAGCTAAAGGACCAGGGATTACTAAAGCTGACTTGAAATCGGTCTCTGAAAATCATACGAAAATGATCAACGAATGGAAGAAGCGTAAACGTATCGCAATGAATATTGTTGATGCCGTGGCTGAAAGTTATCCTTCCAGCAAGAAA CAGTTAATGTCTGATATAGGCATAGAAACAGATGAAGACCGTGGGATTACAATACCGACGTAAAATCAAAAGATGGTTATCAGGAAGCCCAAACTTATTTTCTTTATACATATTCTTTTGTTCCGTTTTTACTTCATATCATTGTTTTGTTTTTTTCCAAAGATAAAATTATGGCTAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]
[-] EMBL BF936320             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCCAGCAAGAAA CAGTTAATGTCTGATATAGGCATAGAAACAGATGAAGACCGTGGTATTACAATACCGACGTAAAATCAAAAGATGGTTATCAGGAAGCCCAAACTTATTTTATTTAAACATATTCTTTTGTTCCGTTTTTACTTCATATCATTGTTTTGTTTTTTTCCAAAGATAAAATTATGGCTAATATGAAAAAAAAAAAAAATAAAAACATGCCATGCAGATGCATTACCGTACTGCGTA]
[-] EMBL AI975917             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TATACATATTCTTTTGTTCCGTTTTTACTTCATATCATTGTTTTGTTTTTTTCCAAAGATAAAATTATGGCTAAAAA AAAAAAAAAAAAAAAAAGAACATGCCATGCAGCTGCATTACAGTACTGCGTA]




>consensus_8218#0
CTGACGTTGGTAATGACTGACTGAATACTAACCAGCCACTTGTCTTCCTTACAGGAGAAG
TGTTTCCTTAACGAGTATACGGATCGGTAATAGGTTACTGAGTTACATTACCGTTATTAT
TGTTGTTTCTTAGACCCTTGATCGCTGTACACTGTTTAGGTGGATCNNNNNNNNNNNNNN
NNNNNNNNNNCCCAGTTTTACCTTTGATTTTAAGATTGACGCGTTATTTTGAGAGATTGT
CAAACATTCACTTCCCTAGCTTTGAATTGTTTTGAACTAAACATACTTGGCTTCTGCATA
CTGTATAATTGATAATTTATNNNNNNNNNNNNNNNNNNNNNTCTAATTTTGCTTGCAAAG
GTGATGTTCTCACATTTTTTGAGAAAGAGAATAGACCTTTTAGCGTTATTGATGTGTGTA
ATGCTTTAAAGAATTATGGAAAAACGGGTATTTCTAGAGCTCTGGATGATCTTGTTGAAG
AAGGTTCAATTAAAGAGAAANNNNATGGAAAGCAAAAGGTTTATGTTTATGACCAGGTTA
ACATAACGCACCGAAGTTTATTAATTCATTGTAGAATAAGCTCCCCTCATTCGATGAAAA
TAAGATTAAAAAGATGGAGGTTCAAAATGCANATTTATCGGTTGAATTAACAGAAGAACA
AAAGAAACTGAAAAGTGTCAATGAGGAACTTAAAAGGGTTACCTCTAGTCTTACAAAGGA
AGAAGCAGAAAAAGAGCTTACTCAAGTAAAGGAAAAGCTAAAGGAAATCGAAACGGAAGT
GAAAGCACTCAAAGCTAAAGGACCAGGGATTACTAAAGCTGACTTGAAATCGGTCTCTGA
AAATCATACGAAAATGATCAACGAATGGAAGAAGCGTAAACGTATCGCAATGAATATTGT
TGATGCCGTGGCTGAAAGTTATCCTTCCAGCAAGAAACAGTTAATGTCTGATATAGGCAT
AGAAACAGATGAAGACCGTGGGATTACAATACCGACGTAAAATCAAAAGATGGTTATCAG
GAAGCCCAAACTTATTTTCTTTATACATATTCTTTTGTTCCGTTTTTACTTCATATCATT
GTTTTGTTTTTTTCCAAAGATAAAATTATGGCTAAAAAGAAAAAAAAAAAAAAAAAAAAC
ATGCCATGCAGCTGCATTACCGTACTGCGTA
clustalw multiple alignements is not computed in this case