These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8230#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 569 fasta sequence [TTATGAATCATTTGAAGATGTGAAAATAAAAGTATTGTACATAATGAAATTAGTTATTTGATGAATCAAATGGAAATATAAGAAAATCAATCACAATAAAAGTATTTTTCGAGAAATTAAGTGTTATAAATGGCAAGCCCGACCACCACGTCAAGGTAGCAGCAACGGTTGGAATAAATGAAAAAGAAATACATTGATAATTTATGTGATGAGTGTATGTTGAATATAACTCA-TTCAAGATGATTTTTCATAGTTTTGACTTCTATATTCAATAATAAGACGTTGAGC-TTCGTCACATACTTTTTTA-CCTTTTGCTTCTAATATATCTAAACACTTTGACAATGCATCCAATTGAGCATTCAATTGATCATACTCTTCTTCAAAATCAAACTGTGGTTGTGGGATACTGTCGCAAGGTGATGGGACAGTCATTTTCAATAAAGAACGCTGTTTTAGTATCTATACACCGGTCTTGTTAAATGAACACCAATGGTCATTTTTACCACATTCTACACAGGGTATCAGAACGTCCCTTTCAGTTAGTTACATTACAGGGCGTACTATTAAAC] [+] EMBL CD179952 [TTATGAATCATTTGAAGATGTGAAAATAAAAGTATTGTACATAATGAAATTAGTTATTTGATGAATCAAATGGAAATATAAGAAAATCAATCACAATAAAAGTATTTTTCGAGAAATTAAGTGTTATAAATGGCAAGCCCGACCACCACGTCAAGGTAGCAGCAACGGTTGGAATAAATGAAAAAGAAATACATTGATAATTTATGTGATGAGTGTATGTTGAATATAACTCA TTCAAGATGATTTTTCATAGTTTTGACTTCTATATTCAATAATAAGACGTTGAGC TTCGTCACATACTTTTTTA CCTTTTGCTTCTAATATATCTAAACACTNTGACAATGCATCCAATTGAGCATTCAATTGATCATACTCTTCTTAAAA ] [-] EMBL AA559476 [ ATGGCAAGCCCGACCACCACGTCAAGGTAGCAGCAACGGTTGGAATAAATGAAAAAGAAATACATTGATAATTTATGTGATGNGNGTATGTTGAATATAACTCATTTCAAGATGATTTTTCATAGTTTTGACTTCTATATTCAATAATAAGACGNTGAGC TTCGTCACATACTTTTTTA CCTTTTGCTTCTAATATATCTAAACACTTTGACAATGCATCCAATTGAGCATTCAATTGATCATACTCTTCTTCAAAATCAAACTGTGGTTGTGGGATACTGTCGCAAGGTGATGGGACAG ] [+] EMBL CD135380 [ GCAGCAACGGTTGGAATAAATGAAAAAGAAATACATTGATAATTTATGTGACGAGTGTATGTTGAATATAACTCA TTCAAGATGATTTTTCATAGTTTTGACTTCTATATACAATAATAAGACGTTGAGC TTCGTCACATACTTTTTTA CCTTTTGCTTCTAATATATCTAAACACTTTGACAATGCATCCAATTGAGCATTCAATTGATCATACTCTTCTTCAAAATCAAACTGTGGTTGTGGGATACTGTCGCAAGGTGATGGGACAGTCATTTTCAATAAAGAACGC ] [-] EMBL AA559398 [ ATATTCAATAATAAGACGTTGAGCTTTCGTCACATACTTTTTTACCCTTTTGCTTCTAATANATCTAAACACTTTGACAATGCATCCAATTGAGCATTCAATTGATCATACTCTTCTTCAAAATCAAACTGTGGTTGTGGGATACTGTCGCAAGGTGATGGGACAGTCATTTTCAATAAAGAACGCTGTTTTAGTATCTATACACCAGTCTTGTTAAATGAACACCAATAGTCATTTTTACCACATTCTACACAGGGTATCAGAACGTCCCTTTCAGTTAGTTACGTTACAGGGCGTACTATTAAAC] [+] EMBL CD196273 [ TATCTAAACACTTTGACAATGCATCCAATTGAGCATTCAATTGATCATACTCTTCTTCAAAATCAAACTGTGGTTGTGGGATACTGTCGCAAGGTGATGGGACAGTCATTTTCAATAAAGAACGCTGTTTTAGTATCTATACACCGGTCTTGTTAAATGAACACCAATGGTCATTTTTACCACATTCTACACAGGGTATCAGAACGTCCCTTTCAGATAGTTACA ] [+] EMBL CD196312 [ TATCTAAACACTTTGACAATGCATCCAATTGAGCATTCAATTGATCATACTCTTCTTCAAAATCAAACTGTGGTTGTGGGATACTGTCGCAAGGTGATGGGACAGTCATTTTCAATAAAGAACGCTGTTTTAGTATCTATACACCGGTCTTGTTAAATGAACACCAATGGTCATTTTTACCACATTCTACACAGGGTATCAGAACGTCCCTTTCAGTTAGTTACA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||