Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8271 cluster # 8271       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8271#0 length = 786 sequences # 6  
consensusID : consensus_8271#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 786
fasta sequence 
                              [CACTAGTGCCCGCAATATTCGGCTTCTAACTAAAGTTCGGAAGACTAGTACTTTCTTTCCGTGCCGATGTCTGAATGGGACCGTTGGGTTATAACGACTGATGACAGGGTTAAGCATGATGCTCAATTTCAGTTCCTTAAACCTGTTGGTGGTTATATAACCGGTGATCAAGCAAGAGTCTTCTTTATGAAATCAGGTTTATCAGTTATGGTTTTGGGGCAGATATGGGCTCTTGCAGATATGGATATGGATGGAAAAATGGACAAGAAAGAGTTTTCGATAGCTATGTTTCTTATCAAAAAAACATTAGAAGGTCTACCTTTGCCTTCTACTTTGCCTCCAGGTCTCAAGAATGATCCTCAACCCGCATTTATTACATCAGGTGTTACTCTCTCATTGAGCTTAGTGAGCGATTCAGGAAATAATGGTCTGTCTTCTGTGTCATCAATCGGGCAAGATTCTAATTCAGCATCTACCGCTTACCAGGATTGGATTATAACATCAACCAATCGTCCACGCTATCGACTTCTTTTCAACCAGCATGATCGAAATAAACGTGGTTTCCTCACGGGTGTAGAAGCAAGAAGTATCCTCTCACAATATGGCCTTCCAAATCCCATACTTGCTCATATCTGGAATCTTGCAGATTTGAATAAAAATGGCAATTTAAACTGCGATGAATTTTGTATTGCAATTTTTTTAATTGAGAAAGCAATTTCTGGATCTCAACTTCCAAACACACTCCCTTCTGGTCTTCTTCCATCAAATCAACCGCGCACATTTGGA]

[+] EMBL CD123555             [CACTAGTGCCCGCAATATTCGGCTTCTAACTAAAGGTCGGAAGACTACTACTTTCTTTCCGTGCCGAAGTCTGAATGGGACCGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD160929             [         CCGCAATATTCGGCTTCTAACTAAAGTTCGGAAGACTAGTACTTTCTTTCCGTGCCGATGTCTGAATGGGACCGTTGGGTTATAACGACTGATGACAGGGTTAAGCATGATGCTCAATTTCAGTTCCTTAAACCTGTTGGTGGTTATATAACCGGTGATCAAGCAAGAGTCTTCTTTATGAAATCAGGTTTATCAGTTATGGTTTTGGGGCAGATATGGGCTCTTGCAGATATGGATATGGATGGAAAAATGGACAAGAAAGAGTTTTCGATAGCTATGTTTCTTATCAAAAAAACATTAGAAGGTCTACCTTTGCCTTCTACTTTGCCTCCAGGTCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD188741             [          CGCAATATTCGGCTTCTAACTAAAGTTCGGAAGACTAGTACTTTCTTTCCGTGCCGATGTCTGAATGGGACCGTTGGGTTATAACGACTGATGGCAGGGTTAAGCATGATGCTCAATTTCAGTTCCTTAAACCTGTTGGTGGTTATATAACCGGTGATCAAGCAAGAGTCTTCTTTATGAAATCAGGTTTATCAGTTATGGTTTTGGGGTAGATATGGGCTCTTGCAGATATGGATATGGATGGAAAAATGGACAAGAAAGAGTTTTCGATAGCTATGTTTCTTATCAAAAAAACATTAGAAGGTCTACCTTTGCCTTCTACTTTGCCTCCAGGTCTCAAGAATGATCCTCAACCCGCATTTATTACATCAGGTGTTACTCTCTCATTGAGCTTAGTGAGCGATTCAGGAAATAATGGTCTGTCTTCTGTGTCATCAATCGGGCAAGATTCTAATTCAGCAT                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD181313             [           GCAATATTCGGCTTCTAACTAAAGTTCGGAAGACTAGTACTTTCTTTCCGTGCCGATGTCTGAATGGGACCGTTGGGTTATAACGACTGATGACAGGGTTAAGCATGATGCTCAATTTCAGTTCCTTAAACCTGTTGGTGGTTATATAACCGGTGATCAAGCAAGAGTCTTCTTTATGAAATCAGGTTTATCAGTTATGGTTTTGGGGCAGATATGGGCTCTTGCAGATTTGGATATGGATGGAAAAATGGACANGAAAGAGTTTTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD178401             [                                                                                                                                                                                                                                    GCTCTTGCAGATATGGATATGGATGGAAAAATGGACAAGAAAGAGTTTTCGATAGCTATGTTTCTTATCAAAAAAACATTAGAAGGTCTACCTTTGCCTTCTACTTTGCCTCCAGGTCTCAAGAATGATCCTCAACCCGCATTTATTACATCAGGTGTTACTCTCTCATTGAGCTTAGTGAGCGATTCAGGAAATAATGGTCTGTCTTCTGTGTCATCAATCGGGCAAGATTCTAATTCAGCATCTACCGCTTACCAGGATTGGATTATAACATCAACCAATCGTCCACGCTATCGACTTCTTTTCAACCAGCATGATCGAAATAAACGTGGTTTCCTCACGGGTGTAGAAGCAAGAAGTATCCTCTCACAATATGGCCTTCCAAATCCCATACTTGCTCATATCTGGAATCTTGCAGATTTGAATAAAAATGGCAATTTAAACTGCGATGAATTTTGTATTGCAATTTTTTTAATTGAGAAAGCAATTTCTGGATCTCAACTTCCAAACACACTCC                                         ]
[-] EMBL CD087105             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAAATAAACGTGGTTTCCTCACGGGTGTAGAAGCAAGAAGTATCCTCTCACAATATGGCCTTCCAAATCCCATACTTGCTCATATCTGGAATCTTGCAGATTTGAATAAAAATGGCAATTTAAACTGCGATGAATTTTGTATTGCAATTTTTTTAATTGAGAAAGCAATTTCTGGATCTCAACTTCCAAACACACTCCCTTCTGGTCTTCTTCCATCAAATCAACCGCGCACATTTGGA]




>consensus_8271#0
CACTAGTGCCCGCAATATTCGGCTTCTAACTAAAGTTCGGAAGACTAGTACTTTCTTTCC
GTGCCGATGTCTGAATGGGACCGTTGGGTTATAACGACTGATGACAGGGTTAAGCATGAT
GCTCAATTTCAGTTCCTTAAACCTGTTGGTGGTTATATAACCGGTGATCAAGCAAGAGTC
TTCTTTATGAAATCAGGTTTATCAGTTATGGTTTTGGGGCAGATATGGGCTCTTGCAGAT
ATGGATATGGATGGAAAAATGGACAAGAAAGAGTTTTCGATAGCTATGTTTCTTATCAAA
AAAACATTAGAAGGTCTACCTTTGCCTTCTACTTTGCCTCCAGGTCTCAAGAATGATCCT
CAACCCGCATTTATTACATCAGGTGTTACTCTCTCATTGAGCTTAGTGAGCGATTCAGGA
AATAATGGTCTGTCTTCTGTGTCATCAATCGGGCAAGATTCTAATTCAGCATCTACCGCT
TACCAGGATTGGATTATAACATCAACCAATCGTCCACGCTATCGACTTCTTTTCAACCAG
CATGATCGAAATAAACGTGGTTTCCTCACGGGTGTAGAAGCAAGAAGTATCCTCTCACAA
TATGGCCTTCCAAATCCCATACTTGCTCATATCTGGAATCTTGCAGATTTGAATAAAAAT
GGCAATTTAAACTGCGATGAATTTTGTATTGCAATTTTTTTAATTGAGAAAGCAATTTCT
GGATCTCAACTTCCAAACACACTCCCTTCTGGTCTTCTTCCATCAAATCAACCGCGCACA
TTTGGA

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)