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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8272 cluster # 8272       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8272#0 length = 1138 sequences # 6  

consensusID : consensus_8272#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1138
fasta sequence
                              [CATACTAACTAATAGTCCTTTTGGGCGCTAGTGAGTAGATCGTGTTGTTAGCATATCAAAACGTCCTCGTATTCCAACTTCATCTGGTTTATTGATGGTATTATTGGATTGTTCAGATCTTATTTTATTTAAACTCGATTGCTTTGATAAATACTCTGGAAGTAATAATCGTCTTACTGACTCAATCCGATCCTCTATACTAGACAATATTATAGAAATTAGTAATCGTGCTACGCACCATTGTTTTTCTT-CTTGTCTTTTGGTATGTCAG-TCTTTATTACACTATCGCAGTATTTATTACAATTATTGTGATCAAAAACGTAGGATGGAAGATGGATATATTCGGGATATTGAAAATTCTCCTACTTTTCGAAATGGACTTACTAATTCTGCTCACATTCCACCTATGATCTCTATAAACTCTCCAGAGGATAAAACTTCACGTACTGAGTATACTCCTCGACCAAAACTTAGCTCTACAAATGCTGAGGTATTTACAAGTGCTTCATTTAAACCAGAAATTGTATCTGAAGATATAACTCCAGTCAGTGAAAATTCTCGATCGTCCAGACCAGACAAAATGACAGGCCCGGCGGAGGATGTTAATAATGGGGCTAGTGCAAGTGATAACACCAATAAGAAGCATTCCAGTGAATTACATGAGAGAAAATACAATAAGTTAAAAATTGGTGTTGATTTCCGAACCAAACCAAATGATCATAGAAAGCATACTTTGGAGAGATTATCTCCACACCATGTAAAAAGTAATAACACTGAGAAGTAGAACTACAAATCTTGTAAAATTTCTAGTTCAGTGGATATTATATAAATTTAATCCTGATCCTCGTCTTTCATTAGCATTATAATTGCTCATTATCTTCAATATTTTCTAATAAAACACTTTCGTTGATTTACGCTCAGTTGGAAAACGAGGTGTTGTTCATGACTTGCATTNTCTCGCATCTGTGTTACTCCTTTTACTTATTTTCGTAACTTTTTATTTCTTACATTCTCATATAGTCTTTACAATGAGACCTCTTTGTATAGTTCTTAACTTTTTCTATCAAATTACCCAATTATAAATATCGTACTTTCAATTGGAAATTATTGTATATCTTATGTAATATTTTATTTTCTT]

[-] EMBL CD197534             [CATACTAACTAATAGTCCTTTTGGGCGCTAGTGAGTAGATCGTGTTGTTAGCATATCAAAACGTCCTCGTATTCCAACTTCATCTGGTTTATTGATGGTATTATTGGATTGTTCAGATCTTATTTTATTTAAACTCGATTGCTTTGATAAATACTCTGGAAGTAATAATCGTCTTACTGACTCAATCCGATCCTCTATACTAGACAATATTATAGAAATTAGTAATCGTGCTACGCACCATTGTTTTTCTT CTTGTCTTTTGGTATGTCAG TCTTTATTACACTATCGCAGTATTTATTACAATTATTGTGATCAAAAACGTAGGATGGAAGATGGATATATTCGGGATATTGAAAATTCTCCTACTTTTCGAAATGGACTTACTAATTCTGCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD132960             [                                                                                                                       TTATTTTATTTAAACTCGATTGCTTTGATAAATACTCTGGAAGTAATAATCGTCTTACTGACTCAATCCGATCCTCTATACTAGACGATATTATAGAAATTAGTAATCGTGCTACGCACCATTGTTTTTCTT CTTGTCTTTTGGTATGTCAG TCTTTATTACACTATCGCAGTATTTATTACAATTATTGTGATCAAAAACGTAGGATGGAAGATGGATATATTCGGGATATTGAAAATTCTCCTACTTTTCGAAATGGACTTACTAATTCTGCTCACATTCCACCTATGATCTCTATAAACTCTCCAGAGGATAAAACTTCACGTACTGAGTATACTCCTCGACCAAAACTTAGCTCTACAAATGCTGAGGTATTTACAAGTGCTTCATTTAAACCAGAAATTGTATCTGAAGATATAACTCCAGTCAGTGAAAAATCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD084323             [                                                                                                                                                                                                                                              gATTGTTTTTCTTCCTTGTCTTTTGGTATGTCAGATCTTTATTACACTATCGCAGTATTTATTACAATTATTGTGATCAAAAACGTAGGATGGAAGATGGATATATTCGGGATATTGAAAATTCTCCTACTTTTCGAAATGGACTTACTAATTCTGCTCACATTCCACCTATGATCTCTATAAACTCTCCAGAGGATAAAACTTCACGTACTGAGTATACTCCTCGACCAAAACTTAGCTCTACAAATGCTGAGGTATTTACAAGTGCTTCATTTAAACCAGAAATTGTATCTGAAGATATAACTCCAGTCAGTGAAAATTCTCGATCGTCCAGACCAGACAAAATGACAGGCCCGGCGGAGGATGTTAATAATGGGGCTAGTGCAAGTGATAACACCAATAAGAAGCATTCCAGTGAATTACATGAGAGAAAATACAATAAGTTAAAAATTGGTGTTGATTTCCGAACCAAACCAAATGATCATAGAAAGCATACTTTGGAGAGATTATCTCCACACCATGT                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD169894             [                                                                                                                                                                                                                                                                                                     TATTTATTACAATTATTGTGATCAAAAACGTAGGATGGAAGATGGATATATTCGGGATATTGAAAATTCTCCTACTTTTCGAAATGGACTTACTAATTCTGCTCACATTCCACCTATGATCTCTATAAACTCTCCAGAGGATAAAACTTCACGTACTGAGTATACTCCTCGACCAAAACTTAGCTCTACAAATGCTGAGGTATTTACAAGTGCTTCATTTAAACCAGAAATTGTATCTGAAGATATAACTCCAGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD082910             [                                                                                                                                                                                                                                                                                                                                               TGGATATATTCGGGATATTGAAAATTCTCCTACTTTTCGAAATGGACTTACTAATTCTGCTCACATTCCACCTATGATCTCTATAAACTCTCCAGAGGATAAAACTTCACGTACTGAGTATACTCCTCGACCAAAACTTAGCTCTACAAATGCTGAGGTATTTACAAGTGCTTCATTTAAACCAGAAATTGTATCTGAAGATATAACTCCAGTCAGTGAAAATTCTCGATCGTCCAGACCAGACAAAATGACAGGCCCGGCGGAGGATGTTAATAATGGGGCTAGTGCAAGTGATAACACCAATAAGAAGCATTCCAGTGAATTACATGAGAGAAAATACAATAAGTTAAAAATTGGTGTTGATTTCCGAACCAAACCAAATGATCATAGAAAGCATACTTTGGAGAGATTATCTCCACACCATGTAAAAAGTAATAACACTGAGAAGTAGAACTACAAATCTTGTAAAATTTCTAGTTCAGTGGATATTATATAAATTTAATCCTGATCCTCGTCTTTCATTAGCATTATAATTGCTCATTATCTTCAATATTTTCTAATAAAACACTTTCGTTGATTTACGCTCAGTTGGAAAACGAGGTGTTGTTCATGACTTGCATTNT                                                                                                                                                                                      ]
[-] EMBL CD076494             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGTATCTGAAGATATAACTCCAGTCAGTGAAAATTCTCGATCGTCCAGACCAGACAAAATGACAGGCCCGGCGGAGGATGTTAATAATGGGGCTAGTGCAAGTGATAACACCAATAAGAAGCATTCCAGTGAATTACATGAGAGAAAATACAATAAGTTAAAAATTGGTGTTGATTTCCGAACCAAACCAAATGATCATAGAAAGCATACTTTGGAGAGATTATCTCCACACCATGTAAAAAGTAATAACACTGAGAAGTAGAACTACAAATCTTGTAAAATTTCTAGTTCAGTGGATATTATATAAATTTAATCCTGATCCTCGTCTTTCATTAGCATTATAATTGCTCATTATCTTCAATATTTTCTAATAAAACACTTTCGTTGATTTACGCTCAGTTGGAAAACGAGGTGTTGTTCATGACTTGCATTTTCTCGCATCTGTGTTACTCCTTTTACTTATTTTCGTAACTTTTTATTTCTTACATTCTCATATAGTCTTTACAATGAGACCTCTTTGTATAGTTCTTAACTTTTTCTATCAAATTACCCAATTATAAATATCGTACTTTCAATTGGAAATTATTGTATATCTTATGTAATATTTTATTTTCTT]


>consensus_8272#0 CATACTAACTAATAGTCCTTTTGGGCGCTAGTGAGTAGATCGTGTTGTTAGCATATCAAA ACGTCCTCGTATTCCAACTTCATCTGGTTTATTGATGGTATTATTGGATTGTTCAGATCT TATTTTATTTAAACTCGATTGCTTTGATAAATACTCTGGAAGTAATAATCGTCTTACTGA CTCAATCCGATCCTCTATACTAGACAATATTATAGAAATTAGTAATCGTGCTACGCACCA TTGTTTTTCTTCTTGTCTTTTGGTATGTCAGTCTTTATTACACTATCGCAGTATTTATTA CAATTATTGTGATCAAAAACGTAGGATGGAAGATGGATATATTCGGGATATTGAAAATTC TCCTACTTTTCGAAATGGACTTACTAATTCTGCTCACATTCCACCTATGATCTCTATAAA CTCTCCAGAGGATAAAACTTCACGTACTGAGTATACTCCTCGACCAAAACTTAGCTCTAC AAATGCTGAGGTATTTACAAGTGCTTCATTTAAACCAGAAATTGTATCTGAAGATATAAC TCCAGTCAGTGAAAATTCTCGATCGTCCAGACCAGACAAAATGACAGGCCCGGCGGAGGA TGTTAATAATGGGGCTAGTGCAAGTGATAACACCAATAAGAAGCATTCCAGTGAATTACA TGAGAGAAAATACAATAAGTTAAAAATTGGTGTTGATTTCCGAACCAAACCAAATGATCA TAGAAAGCATACTTTGGAGAGATTATCTCCACACCATGTAAAAAGTAATAACACTGAGAA GTAGAACTACAAATCTTGTAAAATTTCTAGTTCAGTGGATATTATATAAATTTAATCCTG ATCCTCGTCTTTCATTAGCATTATAATTGCTCATTATCTTCAATATTTTCTAATAAAACA CTTTCGTTGATTTACGCTCAGTTGGAAAACGAGGTGTTGTTCATGACTTGCATTNTCTCG CATCTGTGTTACTCCTTTTACTTATTTTCGTAACTTTTTATTTCTTACATTCTCATATAG TCTTTACAATGAGACCTCTTTGTATAGTTCTTAACTTTTTCTATCAAATTACCCAATTAT AAATATCGTACTTTCAATTGGAAATTATTGTATATCTTATGTAATATTTTATTTTCTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)