cluster # 8275

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Schistosoma mansoni
cluster # 8275 cluster # 8275 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8275#0 length = 527 sequences # 6

consensusID : consensus_8275#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 527
fasta sequence

                              [CGCTAGAATGAGCTTAAAAACTCATTATAATAGCAATGGATACAAATGTTAAAACGTCTCTCCGGACTATCTTATGAAAACAGACCAAGACGTCTTAATATACCTTCTCATTTTACCGCAGGTTACGGGGTGCTTTTATACTGGCTTGTTGTATACTCAGTGAAGAGTTCGGCATTAATGTCTCGTCTTTTCCTTTTATCTAGAACTGATCGTATGAGAGGTCGTCCTAAGAAATTTCAAAGGCCAAGACCGAATCGTTTAATTCCGGAGTTTCGTTTCTAGCACCGAGAATACTCGATAGTAGAATAGTACAGAAGAATGAAGCCTCAATCTACTAACTTTGGAAAAAATTCGACCGGTTTAGAGAAATATCACTAAAACCCCACAATTTCGTGTTTTTTCCC-AAAATTTCCGTAAAGTTGGGAGATTGGAGACTATAGATTGTCTATCAAAAATAGACACCAGTAGGTAGGAATTACTTGACTTCCACAAGAAAAAATTTTGAACTCTAAAAGTTTAGTTACTTA]

[+] EMBL CD090053             [CGCTAGAATGAGCTTAAAAACTCATTATAATAGCAATGGATACAAATGTTAAAACGTCTCTCCGGACTATCTTATGAAAACAGACCAAGACGTCTTAATATACCTTCTCATTTTACCGCAGGCTACGGGGTGCTTTTATACTGGCTTGTTGTATACTCAGTGAAGAGTTCGGCATTAATGTCTCGTCTTTTCCTTTTATCTAGAACTGATCGTATGAGAGGTCGTCCTAAGAAATTTCAAAGGCCAAGACCGAATCGTTTAATTCCGGAGTTTCGTTTCTAGCACCGAGAATACTCGATAGTAGAATAGTACAGAAGAATGAAGCCTCAATCTACTAACTTTGGAAAAAATTCGACCGGTTTAGAGAAATATCACTAAAACCCCACAATTTCGTGTTTTTTCCC AAAATTTCCGTAAAGTTGGGAGATTGGAGACTATAGATTGTCTATCAAAAATAGACACCAGTAGGTAGGAATTACTTGACTTCCACAAGAAAAAATTTTGAACTCTAAAAGTTTAGTTACTT ]
[+] EMBL CD089963             [CGCTAGAATGAGCTTAAAAACTCATTATAATAGCAATGGATACAAATGTTAAAACGTCTCTCCGGACTATCTTATGAAAACAGACCAAGACGTCTTAATATACCTTCTCATTTTACCGCAGGTTACGGGGTGCTTTTATACTGGCTTGTTGTATACTCAGTGAAGAGTTCGGCATTAATGTCTCGTCTTTTCCTTTTATCTAGAACTGATCGTATGAGAGGTCGTCCTAAGAAATTTCAAAGGCCAAGACCGAATCGTTTAATTCCGGAGTTTCGTTTCTAGCACCGAGAATACTCGATAGTAGAATAGTACAGAAGAATGAAGCCTCAATCTACTAACTTTGGAAAAAATTCGACCGGTTTAGAGAAATATCACTAAAACCCCACAATTTCGTGTTTTTTCCC AAAATTTCCGTAAAGTTGGGAGATTGGAGACTATAGATTGTCTATCAAAAATAGACACCAGTAGGTAGGAATTACTTGACTTCCACAAGAAAAAATTTTGAACTCTAAAAGTTTAGTTACTT ]
[+] EMBL CD090093             [CGCTAGAATGAGCTTAAAAACTCATTATAATAGCAATGGATACAAATGTTAAAACGTCTCTCCGGACTATCTTATGAAAACAGACCAAGACGTCTTAATATACCTTCTCATTTTACCGCAGGTTACGGGGTGCTTTTATACTGGCTTGTTGTATACTCAGTGAAGAGTTCGGCATTAATGTCTCGTCTTTTCCTTTTATCTAGAACTGATCGTATGAGAGGTCGTCCTAAGAAATTTCAAAGGCCAAGACCGAATCGTTTAATTCCGGAGTTTCGTTTCTAGCACCGAGAATACTCGATAGTAGAATAGTACAGAAGAATGAAGCCTCAATCTACTAACTTTGGAAAAAATTCGACCGGTTTAGAGAAATATCACTAAAACCCCACAATTTCGTGTTTTTTCCC AAAATTTCCGTAAAGTTGGGAGATTGGAGACTATAGATTGTCTATCAAAAATAGACACCAGTAGGTAGGAATTACTTGACTTCCACAAGAAAAAATTTTGAACTCTA                ]
[+] EMBL CD090122             [CGCTAGAATGAGCTTAAAAACTCATTATAATAGCAATGGATACAAATGTTAAAACGTCTCTCCGGACTATCTTATGAAAACAGACCAAGACGTCTTAATATACCTTCTCATTTTACCGCAGGTTACGGGGTGCTTTTATACTGGCTTGTTGTATACTCAGTGAAGAGTTCGGCATTAATGTCTCGTCTTTTCCTTTTATCTAGAACTGATCGTATGAGAGGTCGTCCTAAGAAATTTCAAAGGCCAAGACCGAATCGTTTAATTCCGGAGTTTCGTTTCTAGCACCGAGAATACTCGATAGTAGAATAGTACAGAAGAATGAAGCCTCAATCTACTAACTTTGGAAAAAATTCGACCGGTTTAGAGAAATATCACTAAAACCCCACAATTTCGTGTTTTTTCCC AAAATTTCCGTAAAGTTGGGAGATTGGAGACTATAGATTGTCTATCAAAAATAGACACCAGTAGGTAGGAATTACTTGACTTCCACAAGAAAAAATTTTGAACTCTA                ]
[-] EMBL CD090088             [ GCTAGAATGAGCTTAAAAACTCATTATAATAGCAATGGATACAAATGTTAAAACGTCTCTCCGGACTATCTTATGAAAACAGACCAAGACGTCTTAATATACCTTCTCATTTTACCGCAGGTTACGGGGTGCTTTTATACTGGCTTGTTGTATACTCAGTGAAGAGTTCGGCATTAATGTCTCGTCTTTTCCTTTTATCTAGAACTGATCGTATGAGAGGTCGTCCTAAGAAATTTCAAAGGCCAAGACCGAATCGTTTAATTCCGGAGTTTCGTTTCTAGCACCGAGAATACTCGATAGTAGAATAGTACAGAAGAATGAAGCCTCAATCTACTAACTTTGGAAAAAATTCGACCGGTTTAGAGAAATATCACTAAAACCCCACAATTTCGTGTTTTTTCCC AAAATTTCCGTAAAGTTGGGAGATTGGAGACTATAGATTGTCTATCAAAAATAGACACCAGTAGGTAGGAATTACTTGACTTCCACAAGAAAAAATTTTGAACTCTAAAAGTTTAGTTACTTA]
[-] EMBL CD090105             [                                                                                                                                                                                                                                                                                                                                                                              AAATATCACTAAAACCCCCCCCCTTTGTGTTTTTTCCCAAAAATTTCCGTAAAGTTGGGAGATTGGAGACTATAGATTGTCTATCAAAAATAGACACCAGTAGGTAGGAATTACTTGACTTCCACAAGAAAAAATTTTGAACTCTAAAAGTTTAGTTACTTA]




>consensus_8275#0
CGCTAGAATGAGCTTAAAAACTCATTATAATAGCAATGGATACAAATGTTAAAACGTCTC
TCCGGACTATCTTATGAAAACAGACCAAGACGTCTTAATATACCTTCTCATTTTACCGCA
GGTTACGGGGTGCTTTTATACTGGCTTGTTGTATACTCAGTGAAGAGTTCGGCATTAATG
TCTCGTCTTTTCCTTTTATCTAGAACTGATCGTATGAGAGGTCGTCCTAAGAAATTTCAA
AGGCCAAGACCGAATCGTTTAATTCCGGAGTTTCGTTTCTAGCACCGAGAATACTCGATA
GTAGAATAGTACAGAAGAATGAAGCCTCAATCTACTAACTTTGGAAAAAATTCGACCGGT
TTAGAGAAATATCACTAAAACCCCACAATTTCGTGTTTTTTCCCAAAATTTCCGTAAAGT
TGGGAGATTGGAGACTATAGATTGTCTATCAAAAATAGACACCAGTAGGTAGGAATTACT
TGACTTCCACAAGAAAAAATTTTGAACTCTAAAAGTTTAGTTACTTA

clustalw multiple alignements is not computed in this case