Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8359 cluster # 8359       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8359#0 length = 709 sequences # 6  

consensusID : consensus_8359#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 709
fasta sequence
                              [GTTTGAATCTATCTTTTCGTCTTGTTTGTATCTCTTGTTTGGGTCGTGAATGATACGTCATTGAGACATCTGTCTCTTTTTAAAGCCTCATGTTTCCAAGCAGACCACCTGGGCCCTCTGAGCCGGGGGGTTCATGCAAGTTTACTGTATTAGAAACTTGTGATAGAATAAAAGAAGAGTTCACTTGCATACAGCAGCAAAACCACTCGCTGCAACTGGAAAGAGAGAAGCTCCTCAGTGAGCGGTCAGATATGCAACGAATTTGTGTAATGTATTATGAGGTGGCTAATGGCTTAAACCTAGAAATGCACAGACAAATGGAAATAGCTAAAAGATTAAGCGCTATTTTGACTCAAGTATTACCATTCTTATCACAAGAGCATCAATCTCAAGTCCTTTCAGCTATCGAAAGAGCTAAACAAGTGACAATGCAGGAATTGAACTCAGTATTGGCAGCACAAATAGAAGATGTAAAGTCCTCGAAGTTCTTCAATGGAAATAATATGGGGCTCCCATTAGAACAGTTCGAAGCATACAAGCAGCTGTCTGTTAT-CGGGGGTGCTAACCCAGGCGTTTCCGGTTTACATGCTTCTAATTTGACTTCTAATCATTCTGGGGGTAGTACATCGTCCAGCACCCCTGGATCTCTCCAGTCAGGGTCAGCTAACGCACAGACGTCCAGTCTGCTTCCCTCTCTTTCTCCATCTGG]

[+] EMBL CD097915             [GTTTGAATCTATCTTTTCGTCTTGTTTGTATCTCTTGTTTGGGTCGTGAATGATACGTCATTGAGACATCTGTCTCTTTTTAAAGCCTCATGTTTCCAAGCAGACCACCTGGGCCCTCTGAGCCGGGGGGTTCATGCAAGTTTACTGTATTAGAAACTTGTGATAGAATAAAAGAAGAGTTCACTTGCATACAGCAGCAAAACCACTCGCTGCAACTGGAAAGAGAGAAGCTCCTCAGTGAGCGGTCAGATATGCAACGAATTTGTGTAATGTATTATGAGGTGGCTAATGGCTTAAACCTAGAAATGCACAGACAAATGGAAATAGCTAAAAGATTAAGCGCTATTTTGACTCAAGTATTACCATTCTTATCACAAGAGCATCAATCTCAAGTCCTTTCAGCTATCGAAAGAGCTAAACAAGTGACAATGCAGGAATTGAACTCAGTATTGGCAGCACAAATAGAAGATGTAAAGTCCTCGAAGTTCT                                                                                                                                                                                                                             ]
[+] EMBL CD071541             [                                                                                                                                        CAAGTTTACTGTATTAGAAACTTGTGATAGAATAAAAGAAGAGTTCACTTACATACAGCAGCAAAACCACTCGCTGCAACTGGAAAGAGAGAAGCTCCTCAGTGAGCGGTCAGATATGCAACGAATTTGTGTAATGTATTATGAGATGGCTAATGGCTTAAACCTAGAAATGCACAGACAAATGGAAATAGCTAAAAGATTAAGCGCTATTTTGACTCAAGTATTACCATTCTTATCACAAGAGCATCAATCTCAAGTCCTTTCAGCTATCGAAAGAGCTAAACAAGTGACAATGC                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD098088             [                                                                                                                                                           ACTTGTGATAGAATAAAAGAAGAGTTCACTTGCATACAGCAGCAAGACCACTCGCTGCAACTGGAAAGAGAGAAGCTCCTCAGTGAGCGGTCAGATATGCAACGAATTTGTGTAATGTATTATGAGGTGGCTAATGGCTTAAACCTAGAAATGCACAGACAAATGGAAATAGCTAAAAGATTAAGCGCTATTTTGACTCAAGTATTACCATTCTTATCACAAGAGCATCAATCTCAAGTCCTTTCAGCTATCGAAAGAGCTAAACAAGTGACAATGCAGGAATTGAACTCAGTATTGGCAGCACAAATAGAAGATGTAAAGTCCTCGAAGTTCTTCAATGGAAATAATATGGGGCTCCCATTAGAACAGTTCGAAGCATACAAGCAGCTGTCTGTTAT CGGGGGTGCTAACCCAGGCGTTTCCGGTTTACATGCTTCTAATTTGACCTCTAATCATTCTGGGGGTAGTACATCGTCCAGCACCCt                                                                     ]
[+] EMBL CD093814             [                                                                                                                                                                                                                                 AGAAGCTCCTCAGTGAGCGGTCAGATATGCAACGAATTTGTGTAATGTATTATGAGATGGCTAATGGCTTAAACCTAGAAATGCACAGACAAATGGAAATAGCTAAAAGATTAAGCGCTATTTTGACTCAAGTATTACCATTCTTATCACAAGAGCATCAATCTCAAGTCCTTTCAGCTATCGAAAGAGCTAAACAAGTGACAATGCAGGAATTGAACTCAGTATTGGCAGCACAAATAGAAGATGTAAAGTCCTCGAAGTTCTTCAATGGAAATAATATGGGGCTCCCATTAGAACAGTTCG                                                                                                                                                                                      ]
[+] EMBL CD144466             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTCTGTTAT CGGGGGTGCTAACCCAGGCGTTTCCGGTTTACATGCTTCTAATTTGACTTCTAATCATTCTGGGGGTAGTACATCGTCCAGCACCCCTGGATCTCTCCAGTCAGGGTCAGCTAACGCACAGACGTCCAGTCTGCTTCCCTCTCTTTC         ]
[+] EMBL CD069381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTATACGGGGGTGCTAACCCAGGCGTTTCCGGTTTACATGCTTCTAATTTGACTTCTAATCATTCTGGGGGTAGTACATCGTCCAGCACCCCTGGATCTCTCCAGTCAGGGTCAGCTAACGCACAAACGTCCAGTCTGCTTCCCTCTCTTTCTCCATCTGG]


>consensus_8359#0 GTTTGAATCTATCTTTTCGTCTTGTTTGTATCTCTTGTTTGGGTCGTGAATGATACGTCA TTGAGACATCTGTCTCTTTTTAAAGCCTCATGTTTCCAAGCAGACCACCTGGGCCCTCTG AGCCGGGGGGTTCATGCAAGTTTACTGTATTAGAAACTTGTGATAGAATAAAAGAAGAGT TCACTTGCATACAGCAGCAAAACCACTCGCTGCAACTGGAAAGAGAGAAGCTCCTCAGTG AGCGGTCAGATATGCAACGAATTTGTGTAATGTATTATGAGGTGGCTAATGGCTTAAACC TAGAAATGCACAGACAAATGGAAATAGCTAAAAGATTAAGCGCTATTTTGACTCAAGTAT TACCATTCTTATCACAAGAGCATCAATCTCAAGTCCTTTCAGCTATCGAAAGAGCTAAAC AAGTGACAATGCAGGAATTGAACTCAGTATTGGCAGCACAAATAGAAGATGTAAAGTCCT CGAAGTTCTTCAATGGAAATAATATGGGGCTCCCATTAGAACAGTTCGAAGCATACAAGC AGCTGTCTGTTATCGGGGGTGCTAACCCAGGCGTTTCCGGTTTACATGCTTCTAATTTGA CTTCTAATCATTCTGGGGGTAGTACATCGTCCAGCACCCCTGGATCTCTCCAGTCAGGGT CAGCTAACGCACAGACGTCCAGTCTGCTTCCCTCTCTTTCTCCATCTGG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)