These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8366#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1231 fasta sequence [AAAGAGTAGATGTACCATGTAATGTATACACATTTGTGTGATGCAAAGAGAAATAGAGAGGCAAAAAGGATTAAAATTGTTTTATTTCTCGTTTCTATATTAAAATGAAATAATATTGAGCGTAGTGAACAGGAAGTTATTTTCTATAGTAAAGAAAAATTGCTGCATCTTTATTTCCCATTACTTTATAAAAAGAAATTAACAGATTTGTAAATGCCTAGAAAGTTAACAGTAGTCAGTCAACTTTTAAGGACAAAAAGTAACATATCATGAATCTCAGAAACGTTTTTATCACCTGAGATAAGAAGGAAGTATGATGAAGTAAATAATCAATAAAAATAAAGGCAATTACATCGGAGTAATAATA-CCTGAAAGATATTACATCTCTCAGATTTAATTTCTTGTTATTTATGTTTTCGTTCAGGTGATG-TCAATTTTGAGAGAAAGAATAGAGTTAGGTGAATCAATATAACTAGTCAACATCATTCTCATGTTTAGAAAATGAAACCAAAAGTACAATTATGCATACAGACGAGCGAGTGAGTGAGCAAACAGAACTCATATCCTTCGATAATACGTACATGTGCATATTTTAAAATAAATTTTAAAAAATCCACTGATATTACTTAAAGTTATTGTGGGATATCACATGAAATAAAAGGTTGTCTTTGTATGCTTTT-TTTACCATCTTGACTCAAGTGTATACCCAAAAAGAAAAAAAGGAGACGACAAAAATGTCGATACGCTTTTTGTTAACTGTGAAGATAATAAAACGGAGATAAATGTAGTTAATAGAACAGATGAACGAATACGTATGTTTATATCGGAAGTTGGAAGAGGCGTAAACAAAAAATAGAAAACAACAGTTATGAGATTACATATCACTTTTTCCTGTCTCTACCACTGAAGCACCTTAATTGTTGAACGGGCAGTAGGATTCTACCTGAATTATAAGAAACATAAATCATATTATATTAGTTAAAGTTAACAATTATACTACTAATAAATTGCAAAAAATATATTAGTACATTATTAGAGAGTGA-GAATTCGGGGAAAGAAAGGAAAATGGCTGGAAAAAAATAAGGTAG-ATAATTAAAAACGTTTACAG-CCAAA-AAAATAATGG-AAAGAGGCAACTTGTTGACTGAAACTATGTTCAGCATTAAACACACACGAATACAAGTAAACAGGTTTAAAAAAGAAATATCAAAGTAGGGATTAACCAATATAATAA] [-] EMBL CD090962 [AAAGAGTAGATGTACCATGTAATGTATACACATTTGTGTGATGCAAAGAGAAATAGAGAGGCAAAAAGGATTAAAATTGTTTTATTTCTCGTTTCTATATTAAAATGAAATAATATTGAGCGTAGTGAACAGGAAGTTATTTTCTATAGTAAAGAAAAATTGCTGCATCTTTATTTCCCATTACTTTATAAAAAGAAATTAACAGATTTGTAAATGCCTAGAAAGTTAACAGTAGTCAGTCAACTTTTAAGGACAAAAAGTAACATATCATGAATCTCAGAAACGTTTTTATCACCTGAGATAAGAAGGAAGTATGATGAAGTAAATAATCAATAAAAATAAAGGCAATTACATCGGAGTAATAATA CCTGAAAGATATTACATCTCTCAGATTTAATTTCTTGTTATTTATGTTTTCGTTCAGGTGATG TCAATTTTGAGAGAAAGAAT ] [+] EMBL CD179707 [ AAGTATGATGAAGTAAATAATCAATAAAAATAAAGGCAATTACATCGGAGTAATAATANCCTGAAAGATATTACATCTCTCAGATTTAATTTCTTGTTATCTATGTTTTCGTTCAGGTGAAGTTCAATTTTGAGAGAAAGAATAGAGTTAGGTGAATCAATATAACTAGTCAACATCATTCTCATGTTTAGAAAATGAAACCAAAAGTACAATTATGCATACAGACGAGCGAGTGAGTGAGCAAACAGAACTCATATCCTTCGATAATACGTACATGTGCATATTTTAAAATAAATTTTAAAAAATCCACTGATATTACTTAAAGTTATTGTGGGATATCACATGAAATAAAAGGTTGTCTTTGTATGCTTTTNNTTACCATCTTGACTCAAG ] [+] EMBL CD117906 [ TAAAGTTATTGTGGGATATCACATGAAATAAAAGGTTGTCTTTGTATGCTTTT TTTACCATCTTGACTCAAGTGTATACCCAAAAAGAAAAAAAGGAGACGACAAAAATGTCGATACGCTTTTTGTTAACTGTGAAGATAATAAAACGGAGATAAATGTAGTTAATAGAACAGATGAACGAATACGTATGTTTATATCGGAAGTTGGAAGAGGCGTAAACAAAAAATAGAAAACAACAGTTATGAGATTACATATCACTTTTTCCTGTCTCTACCACTGAAGCACCTTAATTGTTGAACGGGCAGTAGGATTCTACCTGAATTATAAGACACATAAATCATATTATATTAGTTAAAGTTAACAATTATACTACTAATAAATTGCAAAAAATATATTAGTACATTATTAGAGAGTGAGGAATTCGGGG AAGAAAGGAAAATGGCTTGAAAAAAATAAGGTAG ATAATTAAAAACGTTTACAG CCAAA AAAATAATGG AAAGAGGCNACTTGTTGACTGAAACTATGTTCAGCATTAAACACACACGAATACAAGTAAACAGGTTTAAAAAAGAAATATCAAAGTAGGGATTAACCAATATAATAA] [+] EMBL CD118038 [ TAAAGTTATTGTGGGATATCACATGAAATAAAAGGTTGTCTTTGTATGCTTTT TTTACCATCTTGACTCAAGTGTATACCCAAAAAGAAAAAAAGGAGACGACAAAAATGTCGATACGCTTTTTGTTAACTGTGAAGATAATAAAACGGAGATAAATGTAGTTAATAGAACAGATGAACGAATACGTATGTTTATATCGGAAGTTGGAAGAGGCGTAAACAAAAAATAGAAAACAACAGTTATGAGATTACATATCACTTTTTCCTGTCTCTACCACTGAAGCACCTTAATTGTTGAACGGGCAGTAGGATTCTACCTGAATTAGAAGAAACATAAATCATATTATATTAGTTAAAGTTAACAATTATACTACTAATAAATTGCAAAAAATATATTAGTACATTATTAGAGAGTGA GAATTCGGGGAAAGAAAGGAAAATGGCTGGAAAAAAATAAGta ] [+] EMBL CD090620 [ ctAGTTGGAAGA GCGT AAC AAAAATAGAAAACAACAGTTATGAGACTACATATCACTTTTTCCTGTCTCTACCACTGAAGCACCTTGATTGTTGAACGGGCAGTAGGATTCTACCTGTTTCTTAAGAAACATAAATCATATTATATTAGGTAAAGTTAACAATTATACTACTAATAAATCGCAAAAAANATATTAGTACATTATTACAGAGTGA GAATTCGGGGAAAGAAAGGAAAATGGCTGGAAAAAAATAA GTAGAATAATTAAAAACGTTTACAGACAAAA AAAATAATGGAAAAGAGGCAACTTGCTGACTGAAACTATGTTCA ] [+] EMBL CD122311 [ AAAAAATAGAAAACAACAGTTATGAGATTACATATCACTTTTTCCTGTCTCTACCACTGAAGCACCTTAATTGTTGAACGGGCAGTAGGATTCTACCTGAATTAGAAGAAACATAAATCATATTATATTAGTTAAAGTTAACAATTATACTACTAATAAATTGCAAAAAATATATTAGTACATTATTAGAGAGTGA GAATTCGGGGAAAGAAAGGAAAATGGCTGGAAAAAAATAA GTAGAATAATTAAAAACGTTTACAG ACAAAGAAAATAATGGAAAAGAGGCAACTTGTTGACTGAAACTATGTTCAGCATTAGACACACACGAATACAAGTAAACAGGTTAAAAAAAG AATATCAAAGTAGGGATAAACCAATATAATAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||