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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8420 cluster # 8420       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8420#0 length = 718 sequences # 6  

consensusID : consensus_8420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 718
fasta sequence
                              [AGTGAAGCCGATATTGAACTACGAGATCGATAAGGTTATCTCTACGCTTGACTAAGGCGTTACAGAAGTTTGCACATGTCTTATTGCTTAGCGTAAAATGACGTCTGAACACATTGGAGTTGTTGATGCTCTCCCCTACTTCGACAAAGGATACGATGATCCTGGTATTAGAGAAGCTGCAGCTCTTCTAGTTGAAGAGGAGATGAAACGATATAGACCAACGAAAAATTATTTGGAACACCTCCCTTCTTTATCTGGTCCTATTCAAATGAAATTTGAGACTGAGGTGATGAAAGCCGAATTTGACAGACTGTCTAATCGTTTGCCTATGGAAATGTTAAGTATGAAACGTTACGAGCTACCCCCACCCCCTGCTGGAAAAATGACCGATGTGAAAGCGTGGCAAGATGCAATGGAAAACGCTGAAGCACAGTTAGAACACCAAGCAACAAGAATTGAGAATTTAGAACTAATGGCAGATTATGGATGTAATGCTTGGAAACAATACAACAATGTTTT-GGAAAGCTCTCTGCAGATTTACGAAAAGGAGCTCTTAGAAATAAGGCGAAAAATTCA-GGAAATAAACTGGCGTCGTAAACAAGAGCAAACAGCTGCTGGAAGACATCTCAAGGAACTAGAAGAGTCGTGGGTCGGTTTGGTTGGCAAAAACTATGAAATTGAGCAAGCCATACTAGAACTAGAGCAGGAACTAGGTGTA]

[-] EMBL CD137173             [AGTGAAGCCGATATTGAACTACGAGATCGATAAGGTTATCTCTACGCTTGACTAAGGCGTTACAGAAGTTTGCACATGTCTTATTGCTTAGCGTAAAATGACGTCTGAACACATTGGAGTTGTTGATGCTCTCCCCTACTTCGACAAAGGATACGATGATCCTGGTATTAGAGAAGCTGCAGCTCTTCTAGTTGAAGAGGAGATGAAACGATATAGACCAACGAAAAATTATTTGGAACACCTCCCTTCTTTATCTGGTCCTATTCAAATGAAATTTGAGACTGAGGTGATGAAAGCCGAATTTGACAGACTGTCTAATCGTTTGCCTATGGA                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD134153             [                                                                                                                                                       TACGATGATCCGGGTATTAGAGAAGCTGCAGCTCTTCTAGTTGAAGAGGAGATGAAACGATATAGACCATCGAAAAATTATTTGGAACACCTCCCTTCTTTATCTGGCCCTATTCAAATGAAATTTGAGACTGAGGGGATGAAAGCCTAATTTGACAGACTGTCTAATCGTTTGCCTATGGAAATGTTAAGTATGAAACGTTACGAGCTACCCCCACCCCCTGCTGGAAAAATGACCGATGTGAAAGCGTGGCCAGATGCAATGCAAAACGCTGAAGCACAGTGAGAACACCATGCACCAAGAATTGAGAATTTAGAACTAATGGCAGATTATGGATGTAATGCTTGGAAACAATACAACGATGTTTTAGGAAAGCTCTCTGCAGGATTACGAAAAGGAGCTCTTAGAAATAAGGCGAAGAATTCAGGGAAATAAACTGACGTCGTAAACAAGAGCAAACAGCTGCTGCAAGACATCTCAA                                                                                        ]
[+] EMBL CD184777             [                                                                                                                                                                                                                                                                                                         CGAATTTGACAGACTGTCTAATCGTTTGCCTATGGAGATGTTAAGTATGAAACGTTACGAGCTACCCCCACCCCCTGCTGGAAAAATGACCGATGTGAAAGCGTGGCAAGATGCAATGGAAAACGCTGAAGCACAGTTAGAACACCAAGCAACAAGAATTGAGAATTTAGAACTAATGGCAGATTATGGATGTAATGCTTGGAAACAATACAACAATGTTTT GGAAAGCTCTCTGCAGATTTACGATAAGGAGCTCTTAGAAATTAGGCGAAAAATTCA GGAAATAAACTGGCGTCGTAAACAAGAGCAAACAGCTGCTGGAAGACATCTCAAGGAACTAGAAGAGTCGTGGGTCGGTTTGGTTGGCAAAAACTATGAAATTGAGCAAGCCATACTAGAACTAGAGCAGGAACTAGGTGTA]
[+] EMBL CD160535             [                                                                                                                                                                                                                                                                                                                                                                               CCCCCTGCTGGAAAAATGACCGATGTGAAAGCGTGGCAAGATGCAATGGAAAACGCTGAAGCACAGTTAGAACACCAAGCAACAAGAATTGAGAATTTAGAACTAATGGCAGATTATGGATGCAATGCTTGGAAACAATACAACAATGTTTT GGAAAGCTCTCTGCAGATTTACGAAAAGGAGCTCTTAGAAATAAGGCGAAAAATTCA GGAAATAAACTGGCGTCGTAAACAAGAGCAAACAGCTGCTGGAAGACATCTCAAGGAACTAGAAGAGTCGTGGGTCGGTTTGGTTGGCAAAAACTATGAAATTGAGCAAGCCATA                           ]
[-] EMBL CD133567             [                                                                                                                                                                                                                                                                                                                                                                                                                                              agtTTAGAACACCAAGCATCAAGAATTGAGAATTTAGAACTAATGGCAGATTATGGATGTAATGCTTGGAAACAATACAACAATGTTTT GGAAAGCTCTCTGCAGATTTACGAAAAGGAGCTCTTAGAAATAAGGCGAAAAATTCA GGAAATAAACTGGCGTCGTAAACAAGAGCAAACAGCTGCTGGAAGACATCTCAAGGAACTAGAAGAGTCGTGGGTCGGTTTGGTTGGCAAAAACTATGAAATTGAGCAAGCCATACTAGAACTAGAGCAGGAACTAGGTGTA]
[-] EMBL CD192038             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAATTTAGAACTAATGGCAGATTATGGATGTAATGCTTGGAAACAATACAACAATGTTTT GGAAAGCTCTCTGCAGATTTACGAAAAGGAGCTCTTAGAAATAAGGCGAAAAATTCA GGAAATAAACTGGCGTCGTAAACAAGAGCAAACAGCTGCTGGAAAACATCTCAAGGAACTAGAAGAGTCGTGGGTCGGT                                                               ]


>consensus_8420#0 AGTGAAGCCGATATTGAACTACGAGATCGATAAGGTTATCTCTACGCTTGACTAAGGCGT TACAGAAGTTTGCACATGTCTTATTGCTTAGCGTAAAATGACGTCTGAACACATTGGAGT TGTTGATGCTCTCCCCTACTTCGACAAAGGATACGATGATCCTGGTATTAGAGAAGCTGC AGCTCTTCTAGTTGAAGAGGAGATGAAACGATATAGACCAACGAAAAATTATTTGGAACA CCTCCCTTCTTTATCTGGTCCTATTCAAATGAAATTTGAGACTGAGGTGATGAAAGCCGA ATTTGACAGACTGTCTAATCGTTTGCCTATGGAAATGTTAAGTATGAAACGTTACGAGCT ACCCCCACCCCCTGCTGGAAAAATGACCGATGTGAAAGCGTGGCAAGATGCAATGGAAAA CGCTGAAGCACAGTTAGAACACCAAGCAACAAGAATTGAGAATTTAGAACTAATGGCAGA TTATGGATGTAATGCTTGGAAACAATACAACAATGTTTTGGAAAGCTCTCTGCAGATTTA CGAAAAGGAGCTCTTAGAAATAAGGCGAAAAATTCAGGAAATAAACTGGCGTCGTAAACA AGAGCAAACAGCTGCTGGAAGACATCTCAAGGAACTAGAAGAGTCGTGGGTCGGTTTGGT TGGCAAAAACTATGAAATTGAGCAAGCCATACTAGAACTAGAGCAGGAACTAGGTGTA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)