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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8425 cluster # 8425       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8425#0 length = 1088 sequences # 6  

consensusID : consensus_8425#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1088
fasta sequence
                              [GAGGCCAAGAATGGGCACGAGGCCAATATTGAAATCTCACAGTACAATGAAAAGGTGTTGGATGATCCTCTAAGTTATGAAGAGTACTCGAAATTGTTTGGTGTAATTAAAAATCTTCTAGATTTTACTGATCTCTTCCTGGAGACTTCGAATTTATATGTCAAGATACTTTTCTTTCTTCACAAGAAAATAGAGCTTAGTCAAAATATAGAAACCCGACTGAAACAAACATTTTCCAATATACTTACTGATTCAAATGTCAATTT-TGTTGTGATACAAGGTGGTAATCGTATTATGAAAGATAAATATAATCAAGTTGCTTCAGATCAATGGGATCGCAATCTTTTGCCATCTCTTAAACAACGGGATATTATAGACATTATGCAAAAAGTCGTAGCTGACTTAAATCCAGAAATATCAGACGAAGTGGATATAGTTGAAAAACCAGGAAATCAAGGGGGTTTATCTGCATATTACATTATGCCTGGTGGACATAGAAAGAAGGAGGAGAAACGTGTCAGGAAACTTGAACAAAATTATCACTTTACTTTCCACTGAATAAAAGAAATATAGTAACATTGATTTATGGCATAAAATTGTATCTCATCAATAATCTTTTAGCCACCAATACTCTTTCATTCTATTTTTCTCAGTTTGTTTTTTTCCTGTATAATATAATATTTACATTTGTTGGGTCAGTTTTTAATACTATATGCTACTGTTGTTGCTAACACAATATTTTTGTCAGTTAATCTGAATGTGGATTTATATTCACTTTTCTCTAAAACATTTTTCTATTTTCTTTGTCATGCAAATACATTCTTCCTCCTTAATAATCTTGTCGTAGTCGTCTCAGTTTCTTTTCCAAGCTCATCAATCATCACAACTCTCAATTGGCCATTTTCTTCAAATGATATATTCCTATTAGTGCATCTATCATTTGTATGTGTGAATATGTATGGTCTCTGTGAAATGTTGAGTTCAATGTCCTTTCCTAAGAACTATTATTATTTTTTGAAAACTCAATCAATATACTGTTCAAAACATTGTATTTTTTTCTCAACCAAGTAATAAAGTAAATTTATATA]

[+] EMBL CD081443             [GAGGCCAAGAATGGGCACGAGGCCAATATTGAAATCTCACAGTACAATGAAAAGGTGTTGGATGATCCTCTAAGTTATGAAGAGTACTCGAAATTGTTTGGTGTAATTAAAAATCTTCTAGATTTTACTGATCTCTTCCTGGAGACTTCGAATTTATATGTCAAGATACTTTTCTTTCTTCACAAGAAAATAGAGCTTAGTCAAAATATAGAAACCCGACTGAAACAAACATTTTCCAATATACTTACTGATTCAAATGTCAATTT TGTTGTGATACAAGGTGGTAATCGTATTATGAAAGATAAATATAATCAAGTTGCTTCAGATCAATGGGATCGCAATCTTTTGCCATCTCTTAAACAACGGGATATTATAGACATTATGCAAAAAGTCGTAGCTGACTTAAATCCAGAAATATCAGACGAAGTGGATATAGTTGAAAAACCAGGAAATCAAGGGGGTTTATCTGCATATTACATTATGCCTGGTGGACATAGAAAGAAGGAGGAGAAACGTGTCAGGAAACTTGAACAAAATTATCACTTTACTTTCCACTGAATAAAAGAAATATAGTAACATTGATTTATGGCATAAAATTGTATCTCATCAATAATCTTTTAGCCACCAATACTCTNTCATTCTATTTTTCTCAGTTTGTTTTTTTCCTGTATAATATAAT                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD152023             [                                                                                                                     CTAGATTTTACTGATCTCTTCCTGGAGACTTCGAATTTATATGTCAAGATACTTTTCTTTCTTCACAAGGAAATAGAGCTTAGTCAAAATATAGAAACCCGACTGAAACAAACATTTTCCAATATACTTACTGATTCAAATGTCAATTT TGTTGTGATACAAGGTGGTAATCGTATTATGAAAGATAAATATAATCAAGTTGCTTCAGATCAATGGGATCGCAATCTTTTGCCATCTCTTAAACAACGGGATATTATAGACATTATGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD078036             [                                                                                                                               CTGATCTCTTCCTGGAGACTTCGAATTTATATGTCAAGATACTTTTCTTTCTTCACAAGAGAATAGAGCTTAGTCAAAATATAGAAACCCGACTGAAACAAACATTTTCCAATATACTTACTGATTCAAATGTCAATTTCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD154603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAGGAGAAACGTGTCAGGAAACTTGAACAAAATTATCACTTTACTTTCCACTGAATAAAAGAAATATAGTAACATTGATTTATGGCATAAAATTGTATCTCATCAATAATCTTTTAGCCACCAATACTCTTTCATTCTATTTTTCTCAGTTTGTTTTTTTCCTGTATAATATAATATTTACATTTGTTGGGTCAGTTTTTAATACTATATGCTACTGTTGTTGCTAACACAATATTTTTGTCAGTTAATCTGAATGTGGATTTATATTCACCTTTCTCTAAAACATTTTTCTATTTTCTTTGTCATGCAAATACATTCTTCCTCCTTAATAATCTTGTCGTAGTCGTCTCAGTTTCTTTTCCAAGCTCATCAATCATCACAACTCTCAATTGGCCATTTTCTTCAAATGATATATCCCTATTAGTGCATCTATCATTTGTATGTGTGAATATGTATGGTCTCTGTGAAAT                                                                                                                  ]
[+] EMBL CD154356             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAGGAGAAACGTGTCAGGAAACTTGAACAAAATTATCACTTTACTTTCCACTGAATAAAAGAAATATAGTAACATTGATTTATGGCATAAAATTGTATCTCATCAATAATCTTTTAGCCACCAATACTCTTTCATTCTATTTTTCTCAGTTTGTTTTTTTCCTGTATAATATAATATTTACATTTGTTGGGTCAGTTTTTAATACTATATGCTACTGTTGTTGCTAACACAATATTTTTGTCAGTTAATCTGAATGTGGATTTATATTCACTTTTCTCTAAAACATTTTTCTATTTTCTTTGTCATGCAAATACATTCTTCCTCCTTAATAATCTTGTCGTAGTCGTCTCAGTTTCTTTTCCAAGCTCATCAATCATCACAACTCTCAATTGGCCATTTTCTTCAAATGATATATTCCTATTAGTGCATCTATCATTTGTATGTGTGAATATGTATGGTCTCTGTGAAAT                                                                                                                  ]
[-] EMBL CD075267             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATAAAATTGTATCTCATCAATAATCTTTTAGCCACCAATACTCTTTCATTCTATTTTTCTCAGTTTGTTTTTTTCCTGTATAATATAATATTTACATTTGTTGGGTCAGTTTTTAATACTATATGCTACTGTTGTTGCTAACACAATATTTTTGTCAGTTAATCTGAATGTGGATTTATATTCACTTTTCTCTAAAACATTTTTCTATTTCCTTTGTCATGCAAATACATTCTTCCTCCTTAATAATCTTGTCGTAGTCGTCTCAGTTTCTTTTCCAAGCTCATCAATCATCACAACTCTCAATTGGCCATTTTCTTCAAATGATATATTCCTATTAGTGCATCTATCATTTGTATGTGTGAATATGTATGGTCTCTGTGAAATGTTGAGTTCAATGTCCTTTCCTAAGAACTATTATTATTTTTTGAAAACTCAATCAATATACTGTTCAAAACATTGTATTTTTTTCTCAACCAAGTAATAAAGTAAATTTATATA]


>consensus_8425#0 GAGGCCAAGAATGGGCACGAGGCCAATATTGAAATCTCACAGTACAATGAAAAGGTGTTG GATGATCCTCTAAGTTATGAAGAGTACTCGAAATTGTTTGGTGTAATTAAAAATCTTCTA GATTTTACTGATCTCTTCCTGGAGACTTCGAATTTATATGTCAAGATACTTTTCTTTCTT CACAAGAAAATAGAGCTTAGTCAAAATATAGAAACCCGACTGAAACAAACATTTTCCAAT ATACTTACTGATTCAAATGTCAATTTTGTTGTGATACAAGGTGGTAATCGTATTATGAAA GATAAATATAATCAAGTTGCTTCAGATCAATGGGATCGCAATCTTTTGCCATCTCTTAAA CAACGGGATATTATAGACATTATGCAAAAAGTCGTAGCTGACTTAAATCCAGAAATATCA GACGAAGTGGATATAGTTGAAAAACCAGGAAATCAAGGGGGTTTATCTGCATATTACATT ATGCCTGGTGGACATAGAAAGAAGGAGGAGAAACGTGTCAGGAAACTTGAACAAAATTAT CACTTTACTTTCCACTGAATAAAAGAAATATAGTAACATTGATTTATGGCATAAAATTGT ATCTCATCAATAATCTTTTAGCCACCAATACTCTTTCATTCTATTTTTCTCAGTTTGTTT TTTTCCTGTATAATATAATATTTACATTTGTTGGGTCAGTTTTTAATACTATATGCTACT GTTGTTGCTAACACAATATTTTTGTCAGTTAATCTGAATGTGGATTTATATTCACTTTTC TCTAAAACATTTTTCTATTTTCTTTGTCATGCAAATACATTCTTCCTCCTTAATAATCTT GTCGTAGTCGTCTCAGTTTCTTTTCCAAGCTCATCAATCATCACAACTCTCAATTGGCCA TTTTCTTCAAATGATATATTCCTATTAGTGCATCTATCATTTGTATGTGTGAATATGTAT GGTCTCTGTGAAATGTTGAGTTCAATGTCCTTTCCTAAGAACTATTATTATTTTTTGAAA ACTCAATCAATATACTGTTCAAAACATTGTATTTTTTTCTCAACCAAGTAATAAAGTAAA TTTATATA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)