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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8430 cluster # 8430       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8430#0 length = 839 sequences # 6  

consensusID : consensus_8430#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 839
fasta sequence
                              [TTATCTCCCATCATTCTTCCGCCTCTTTAGAAAGTTACAACTATGTCTTACAGCAGAAATGTCTCTAAGCTTGACCCTATTGATCAGTTGTTTCAACAGGTTTGCGTTACTACTTGTCATATTCAGCGTAGTTTTTTGTACATGATTTGTTAAAATAAAGCTGTCAAAGTCTCTCGCAAACTTACTAGATCATTTTAGACCATGAACAGTCAGTGCTGTCAATTTTACACTCGGTTAATAACGATGCACTTACTGTCACAAGACTAGTTTTGTGCTAAAGCACATATATTTCAACTTTTTATTAACTCGTGTACTAGGTATTTGGCTAAGAGCCAGGCCGTGTAAGGGCTAGCAATGCAATCTGGTCCGATGGACTTAAGTTGTTACAAACGAGTTCAAACCTGCCACTTATTGGCTAAAAGTCTCACACCCTAACCACTGAGCCACCGCTTCAAGAACTCAGTTCCCAGTCTTTCTGCAGTTTAGAGCTACAAAGCTTTCAGTTACTCGTCCTTACTAGATTCTGACCTAAAAGCCTACACTTAAACACTTCAGTCTCCAGTAAATATACTCTCAAGAAGCTAAAAATTAGTTGTTGATGAACTCCACTCTCAGTAGTAGTCGCTATGTAAATTATTTATTTCAATAGCAAATGTTTCTCATCGACTTGGTGTTTTCGAAACCTGATATCCATGCATATGACCGGAAACAATAATCGTCACAAGTAGCTCTATGATCTCAACTATCGATTACTCGCTAAGTAACCATCATGGAACTGAATATATCGGTTCTTTTAGTATGCACTCCACCAAGCCGTATCTCTGACAACTACGTGTCAA]

[+] EMBL CD200969             [TTATCTCCCATCATTCTTCCGCCTCTTTAGAAAGTTACAACTATGTCTTACAGCAGAAATGTCTCTAAGCTTGACCCTATTGATCAGTTGTTTCAACAGGTTTGCGTTACTACTTGTCATATTCAGCGTAGTTTTTTGTACATGATTTGTTAAAATAAAGCTGTCAAAGTCTCTCGCAAACTTACTAGATCATTTTAGACCATGAACAGTCAGTGCTGTCAATTTTACACTCGGTTAATAACGATGCACTTACTGTCACAAGACTAGTTTTGTGCTAAAGCACATATATTTCAACTTTTTATTAACTCGTGTACTAGGTATTTGGCTAAGAGCCAGGCCGTGTAAGGGCTAGCAATGCAATCTGGTCCGATGGACTTAAGTCGTTACAAACGAGTTCAAACCTGCCACTTATTGGCTAAAAGTCTCACACCCTAACCACTGAGCCACCGCTTCAA                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD163147             [                                                                                                      TGCGTTACTACTTGTCATATTCAGCGTAGTTTTTTGTACATGATTTGTTAAAATAAAGCTGTCAAAGTCTCTCGCAAACTTACTAGATCATTTTAGACCATGAACAGTCAGTGCTGTCAATTTTACACTCGGTTAATAACGATGCACTTACTGTCACAAGACTAGTTTTGTGCTAAAGCACATATATTTCAACTTTTTATTAACTCGTGTACTAGGTATTTGGCCAAGAGCCAGGCCGTGTAAGGGCTAGCAATGCAATCTGGTCCGATGGACTTAAGTTGTTACAAACGAGTTCAAACCTGCCACTTATTGGCTAAAAGTCTCACACCCTAACCACTGAGCCACCGCTTCAAGAACTCAGTTCCCAGTCTTTC                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD139423             [                                                                                                                                                                                                                                                                                     AAGCACATATATTTCAACTTTTTATTAACTCGTGTACTAGGTATTTGGCTAAGAGCCAGGCCGTGTAAGGGCTAGCAATGCAATCTGGTCCGATGGACTTAAGTTGTTACAAACGAGTTCAAACCTGCCACTTATTGGCTAAAAGTCTCACACCCTAACCACTGAGCCACCGCTTCAAGAACTCAGTTCCCAGTCTTTCTGCAGTTTAGAGCTACAAAGCTTTCAGTTACTCGTCCTTACTAGATTCTGACCTGAAAGCCTACACTTAAACACTTCAGTCTCCAGTAAATATACTCTCAAGAAGCTAAAAATTAGTTGTTGATGAACTCCACTCTCAGTAGTAGTCGCTATGTAAATTATTTATTTCAATAGCAAATGTTTCTCATCGACTTGGTGTTTTCGAAACCTGATATCCATGCATATGACCGGAAACAATAAT                                                                                                                           ]
[+] EMBL CD187731             [                                                                                                                                                                                                                                                                                                                                                                    GCAATCTGGTCCGATGGACTTAAGTTGTTACAAACGAGTTCAAACCTGCCACTTATTGGCTAAAAGTCTCACACCCTAACCACTGAGCCACCGCTTCAAGAACTCAGTTCCCAGTCTTTCTGCAGTTTAGAGCTACAAAGCTTTCAGTTACTCGTCCTTACTAGATTCTGACCTAAAAGCCTACACTTAAACACTTCAGTCTCCAGTAAATATACTCTCAAGAAGCTAAAAATTAGTTGTTGATGAACTCCACTCTCAGTAGTAGTCGCTATGTAAATTATTTATTTCAATAGCAAATGTTTCTCATCGACTTGGTGTTTTCGAAACCTGATATCCATGCATATGACCGGAAACAATAATCGTCACAAGTAGCTCTATGATCTCAACTATCGATTACTCGCTAAGTAACCATCATGGAACTGAATATATCGGTTCTTTTAGTATGCACTCCACCAAGCCGTATCTCTGACAACTACGTGTCAA]
[+] EMBL CD187741             [                                                                                                                                                                                                                                                                                                                                                                    GCACTCTGGTCCGATGGACTTAAGTTGTTACAAACGAGTTCAAACCTGCCACTTATTGGCTAAAAGTCTCACACCCTAACCACTGAGCCACCGCTTCAAGAACTCAGTTCCCAGTCTTTCTGCAGCTTACAGCTACAAAGCTTTCAGTTACTCGTCCTTACTAGATTCTGACCTAAAAGCCTACACTT                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD071758             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAGCAAATGTTTCTCATCGACTTGGTG TTTCGAAACCTGATATCCATGCATATGACCGGAAACAATAATCGTCACAAGTAGCTCTATGATCTCAACTATCGATTACTCGCTAAGTAACCATCATGGAACTGAATATATCGGTTCTTTTAGTA                                        ]


>consensus_8430#0 TTATCTCCCATCATTCTTCCGCCTCTTTAGAAAGTTACAACTATGTCTTACAGCAGAAAT GTCTCTAAGCTTGACCCTATTGATCAGTTGTTTCAACAGGTTTGCGTTACTACTTGTCAT ATTCAGCGTAGTTTTTTGTACATGATTTGTTAAAATAAAGCTGTCAAAGTCTCTCGCAAA CTTACTAGATCATTTTAGACCATGAACAGTCAGTGCTGTCAATTTTACACTCGGTTAATA ACGATGCACTTACTGTCACAAGACTAGTTTTGTGCTAAAGCACATATATTTCAACTTTTT ATTAACTCGTGTACTAGGTATTTGGCTAAGAGCCAGGCCGTGTAAGGGCTAGCAATGCAA TCTGGTCCGATGGACTTAAGTTGTTACAAACGAGTTCAAACCTGCCACTTATTGGCTAAA AGTCTCACACCCTAACCACTGAGCCACCGCTTCAAGAACTCAGTTCCCAGTCTTTCTGCA GTTTAGAGCTACAAAGCTTTCAGTTACTCGTCCTTACTAGATTCTGACCTAAAAGCCTAC ACTTAAACACTTCAGTCTCCAGTAAATATACTCTCAAGAAGCTAAAAATTAGTTGTTGAT GAACTCCACTCTCAGTAGTAGTCGCTATGTAAATTATTTATTTCAATAGCAAATGTTTCT CATCGACTTGGTGTTTTCGAAACCTGATATCCATGCATATGACCGGAAACAATAATCGTC ACAAGTAGCTCTATGATCTCAACTATCGATTACTCGCTAAGTAACCATCATGGAACTGAA TATATCGGTTCTTTTAGTATGCACTCCACCAAGCCGTATCTCTGACAACTACGTGTCAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)