Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8447 cluster # 8447       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8447#0 length = 929 sequences # 6  
consensusID : consensus_8447#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 929
fasta sequence 
                              [TGGGTTCATCCTGCATTTAGTACGAAGCAATGACAAGTGTCATGTCTCAAAAAGATGGGCATATATTAAGCATGATAGTCTTTTTGTCTTTCCGAATCATCTAAACCGTAAGAACTGCCTTAAAATTTTCCTCAATCATTCTGGTGTTTCCGTATCATATCAAGAAGATGATACTCCCTGGATAACAATCACAGAATACTCTGGAGCTACATATTATCTTAGACCAGAAGCAGAGAAAACTTTTCAAAACTGGCTGACTGCTGTTTACAAAGCGTCTAAAAATTGCAAGTCACAGGCAGTAGGACATACTATGGAGTGCCGACCAAATTTTACAGATCAACACTTGTCCAAATCACTGGAACAGGAAATCCTGACTTCAAAAAGATTAAATGAAAAAAGAAGTCTGGATTATCTAGGCCCTCACTATTCCAACATCTATCAGTCTGGTAACAATGGATTCAATGTTCAACCATCACTGAATTCAGCAGTTCAACCTATCAACAGTAATTATTTGGACAGAGATTCAGAAATGATTCATTCAAAGCAGAAAAACGTTAAACATGTTAATGAAAATACATTGAGAAGTAAAAACATGCAGGTTGAATATAAACCGGGCGAAGATAAACCACCACCTAGACCACCGAGAAATCCCCATGTACTACACACTGTTAAAGAACACGCAAATATGCATGATGATGAGATTGTGGAAACAAAAGCTCTGACGAATGTTAAACATCGATATCCTGTTACTGGTTTGGCTAAACGAATGAGTGTTGCGGCGTCAGATCTTCTAGGCAAATCGCGTGATGATCTCATCTTGTTGCTTCTTCAATTAAATCGTGAAAAAGCCAATCTTAAAAGATGGTATGAATATTTCACTTATCAAATCGATCAAATTCAGTTAGTAAAAGGAAATACAAAAAAANGGG]

[+] EMBL AI976215             [TGGGTTCATCCTGCATTTAGTACGAAGCAATGACAAGTGTCATGTCTCAAAAAGATGGGCATATATTAAGCATGATAGTCTTTTTGTCTTTCCGAATCATCTAAACCGTAAGAACTGCCTTAAAATTTTCCTCAATCATTCTGGTGTTTCCGTATCATATCAAGAAGATGATACTCCCTGGATAACAATCACAGAATACTCTGGAGCTACATATTATCTTAGACCAGAAGCAGAGAAAACTTTTCAAAACTGGCTGACTGCTGTTTACAAAGCGTCTAAAAATTGCAAGTCACAGGCAGTAGGACATACTATGGAGTGCCGACCAAATTTTACAGATCAACACTTGTCCAAATCACTGGAACAGGAAATCCTGACTTCAAAAAGATTAAATGAAAAAAGAAGTCTGGATTATCTAGGCCCTCACTATTCCAACATCTATCAGTCTGGTAACAATGGATTCAATGTTCAACCATCACTGAATTCAGCAGTTCAACCTATCAACAGTAATTATTTGGACAGAGATTCAGAAATGATTCATTCAAAGCAGAAAAACGTTAAACATGTTAATGAAAATACATTGAGAAGTAAAAACATGCAGGTTGAATATAAACCGGGCG                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI976226             [TGGGTTCATCCTGCATTTAGTACGAAGCAATGACAAGTGTCATGTCTCAAAAAGATGGGCATATATTAAGCATGATAGTCTTTTTGTCTTTCCGAATCATCTAAACCGTAAGAACTGCCTTAAAATTTTCCTCAATCATTCTGGTGTTTCCGTATCATATCAAGAAGATGATACTCCCTGGATAACAATCACAGAATACTCTGGAGCTACATATTATCTTAGACCAGAAGCAGAGAAAACTTTTCAAAACTGGCTGACTGCTGTTTACAAAGCGTCTAAAAATTGCAAGTCACAGGCAGTAGGACATACTATGGAGTGCCGACCAAATTTTACAGATCAACACTTGTCCAAATCACTGGAACAGGAAATCCTGACTTCAAAAAGATTAAATGAAAAAAGAAGTCTGGATTATCTAGGCCCTCACTATTCCAACATCTATCAGTCTGGTAACAATGGATTCAATGTTCAACCATCACTGAATTCAGCAGTTCAACCTATCAACAGTAATTATTTGGACAGAGATTCAGAAATGATTCATTCAAAGCAGAAAAACGTTAAACATGTTAATGAAAATACATTGAGAAGTAAAAACATGCAGGTTGAATATAAACCGGGCG                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD116776             [                               GACAAGTGTCATGTCTCAAAAAGATGGGCATATATTAAGCATGATAGTCTTTTTGTCTTTCCGAATCATCTAAACCGTAAGAACTGCCTTAAAATTTTCCTCAATCATTCTGGTGTTTCCGTATCATATCAAGAAGATGATACTCCCTGGATTACAATCACAGAATACTCTGGAGCTACATATTATCTTAGACCAGAAGCAGAGAAAACTTTTCAAAACTGGCTGACTGCTGTTTACAAAGCGTCTAAAAATTGCAAGTCACAGGCAGTAGGACATACTATGGAGTGCCGACCAAATTTTACAGATCAACACTTGTCCAAATCACTGGAACAGGAAATCCTGACTTCAAAAAGATTAAATGAAAAAAGAAGTCTGGATTATCTAGGCCCTCACTATTCCAACATCTATCAGTCTGGTAACAATGGATTCAATGTTCAACCATCACTGAATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD071859             [                                                                                                                                                                                                                                                                                                                                                                                                                               GGCCCTCACTGTTCCAACATCTATCAGTCTGGTAACAATGGATTCAATGTTCAACCATCACTGAATTCAGCAGTTCAACCTATCAACAGTAATTATTTGGACAGA                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD131613             [                                                                                                                                                                                                                                                                                                                                                                                                                                 CCCTCACTATTCCAACATCTATCAGTCTGGTAACAATGGATTCAATGTTCAACCATCACTGAATTCAGCAGTTCAACCTATCAACAGTAATTATTTGGACAGAGATTCAGAAATGACTCATTCAAAGCAGAAAAACGTTAAACATGTTAATGAAAATACATTGAGAAGTAAAAACATGCAGGTTGAATATAAACCGGGCGAAGATAAACCACCACCTAGACCACCGAGAAATCCCCATGTACTACACACTGTTAAAGAACACGCAAATATGCATGATGATGAGATTGTGGAAACAAAAGCTCTGACGAATGTTAAACATCGATATCCTGTTACTGGTTTGGCTAAACGAATGAGTGTTGCGGCGTCAGATCTTCTAGGCAAATCGCGTGATGATCTCATCTTGTTGCTTCTTCAATTAAATCGTGAAAAAGCCAATCTTAAAAGATGGTATGAATATTTCACTTATCAAATCGATCAAATTCAGTTAGTAAAAGGAAATACAAAAAAANGGG]
[+] EMBL CD131238             [                                                                                                                                                                                                                                                                                                                                                                                                                                 CCCTCACTATTCCAACATCTATCAGTCTGGTAACAATGGATTCAATGTTCAACCATCACTGAATTCAGCAGTTCAACCTATCAACAGTAATTATTTGGACAGAGATTCAGAAATGACTCATTCAAAGCAGAAAAACGTTAAACATGTTAATGAAAATACATTGAGAAGTAAAAACATGCAGGTTGAATATAAACCGGGCGAAGATAAACCACCACCTAGACCACCGAGAAATCCCCATGTACTACACACTGTTAAAGAACACGCAAATATGCATGATGATGAGATTGTGGAAACAAAGGCTCTGACGAATGTTAAACATCGATATCCTGTTACTGGTTTGGCTAAACGAATGAGTGTTGCGGCGTCAGATCTTCTAGGCAAATCGCGTGATGATCTCATCTTGTTGCTTCTTCAATTAAATCGTGAAAAAGCCAATCTTAAAAGATGGTATGAATATTTCACTTATCAAATCGATCAAATTCAGTTAGTAA                     ]




>consensus_8447#0
TGGGTTCATCCTGCATTTAGTACGAAGCAATGACAAGTGTCATGTCTCAAAAAGATGGGC
ATATATTAAGCATGATAGTCTTTTTGTCTTTCCGAATCATCTAAACCGTAAGAACTGCCT
TAAAATTTTCCTCAATCATTCTGGTGTTTCCGTATCATATCAAGAAGATGATACTCCCTG
GATAACAATCACAGAATACTCTGGAGCTACATATTATCTTAGACCAGAAGCAGAGAAAAC
TTTTCAAAACTGGCTGACTGCTGTTTACAAAGCGTCTAAAAATTGCAAGTCACAGGCAGT
AGGACATACTATGGAGTGCCGACCAAATTTTACAGATCAACACTTGTCCAAATCACTGGA
ACAGGAAATCCTGACTTCAAAAAGATTAAATGAAAAAAGAAGTCTGGATTATCTAGGCCC
TCACTATTCCAACATCTATCAGTCTGGTAACAATGGATTCAATGTTCAACCATCACTGAA
TTCAGCAGTTCAACCTATCAACAGTAATTATTTGGACAGAGATTCAGAAATGATTCATTC
AAAGCAGAAAAACGTTAAACATGTTAATGAAAATACATTGAGAAGTAAAAACATGCAGGT
TGAATATAAACCGGGCGAAGATAAACCACCACCTAGACCACCGAGAAATCCCCATGTACT
ACACACTGTTAAAGAACACGCAAATATGCATGATGATGAGATTGTGGAAACAAAAGCTCT
GACGAATGTTAAACATCGATATCCTGTTACTGGTTTGGCTAAACGAATGAGTGTTGCGGC
GTCAGATCTTCTAGGCAAATCGCGTGATGATCTCATCTTGTTGCTTCTTCAATTAAATCG
TGAAAAAGCCAATCTTAAAAGATGGTATGAATATTTCACTTATCAAATCGATCAAATTCA
GTTAGTAAAAGGAAATACAAAAAAANGGG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)