cluster # 8468

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Schistosoma mansoni
cluster # 8468 cluster # 8468 Sequences # 7 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8468#0 length = 360 sequences # 7

consensusID : consensus_8468#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 360
fasta sequence

                              [CCTCGTTAGCTGTGGTCGTGTGTTGGTTGACTTGAGATGAGTGACGGATCCAGGAAAGCTGTTGTCAAAAATGTAGATATGTCTGAGGAAATGCAACAAGATGCGATAGATGCAGCAACCCAAGCATTTGAAAAGTACAACATCGAGAAAGATATTGCTGCATATATTAAGAAAGAATTCGACAAGAAGCATAATCCAACGTGGCATTGTGTTGTTGGGAGGAACTTTGGGAGCTACGTTACACATGAAACAAAACACTTTATCTACTTCTACGCTGGACAAGTTGCAATTCTTTTGTTCAAATCTGGTTAGAATGTACTGCATT-TAGTGATTATGTTAACATTATATCTATAAAGTTTG]

[-] EMBL CD190224             [CCTCGTTAGCTGTGGTCGTGTGTTGGTTGACTTGAGATGAGTGACGGATCCAGGAAAGCTGTTGTCAAAAATGTAGATATGTCTGAGGAAATGCAACAAGATGCGATAGATGCAGCAACCCAAGCATTTGAAAAGTACAACATCGAGAAAGATATTGCTGCATATATTAAGAAAGAATTCGACAAGAAGCATAATCCAACGTGGCATTG                                                                                                                                                        ]
[+] EMBL AW017288             [      TAGCTGTGGTCGTGTGTTGGTTGACTTGAGATGAGTGACGGATCCAGGAAAGCTGTTGTCAAAAATGTAGATATGTCTGAGGAAATGCAACAAGATGCGATAGATGCAGCAACCCAAGCATTTGAAAAGTACAACATCGAGAAAGATATTGCTGCATATATTAAGAAAGAATTCGACAAGAAGCATAATCCAACGTGGCATTGTGTTGTTGGGAGGAACTTTGGGAGCTACGTTACACATGAAACAAAACACTTTATCTACTTCTACGCTGGACAAGTTGCAATTCTTTTGTTCAAATCTGGTTAGAATGTACTGCATT TAGTGATTATGTTAACATTATATCTATAAAGTT  ]
[+] EMBL CD194300             [                       TGGTTGACTTGAGATGAGTGACGGATCCAGGAAAGCTGTTGTCAAAAATGTAGATATGTCTGAGGAAATGCAACAAGATGCGATAGATGCAGCAACCCAAGCATTTGAAAAGTACAACATCGAGAAAGATATTGCTGCATATATTAAGAAAGAATTCGACAAGAAGCATAATCCAACGTGGCATTGTGTTGTTGGGAGGAACTTTGGGAGCTACGTTACACA                                                                                                                    ]
[+] EMBL CD079432             [                                                  CAGGAAAGCTGTTGTCAAAAATGTAGATATGTCTGAGGAAATGCAACAAGATGCGATAGATGCAGCAACCCAAGCATTTGAAAAGTACAACATCGAGAAAGATATTGCTGCATATATTAAGAAAGAATTCGACAAGAAGCATAATCCAACGTGGCATTGTGTTGTTGGGAGGAACTTTGGGAGCTACGTTACACATGAAACAAAACACTTTATCTACTTCTACGCTGGACAAGTTGCAATTCTTTTGTTCAAATCTGGTTAGAATGTACTGCATT TAGTGATTATGTTAACATTATATCTATAAAGTTT ]
[+] EMBL CD084432             [                                               aggCAGGAAAGCTGTTGTCAAAAATGTAGATATGTCTGAGGAAATGCAACAAGATGCGATAGATGCAGCAACCCAAGCATTTGAAAAGTACAACATCGAGAAAGATATTGCTGCATATATTAAGAAAGAATTCGACAAGAAGCATAATCCAACGTGGCATTGTGTTGTTGGGAGGAACTTTGGGAGCTACGTTACACATGAAACAAAACACTTTATCTACTTCTACGCTGGACAAGTTGCAATTCTTTTGTTCAAATCTGGTTAGAATGTACTGCATT TAGTGATTATGTTAACATTATATCTATAAAGTTT ]
[-] EMBL CD073703             [                                                   AGGAAAGCTGTTGTCAAAAATGTAGATATGTCTGAGGAAATGCAACAAGATGCGATAGATGCAGCAACCCAAGCATTTGAAAAGTACAACATCGAGAAAGATATTGCTGCATATATTAAGAAAGAATTCGACAAGAAGCATAATCCAACGTGGCATTGTGTTGTTGGGAGGAACTTTGGGAGCTACGTTACACATGAAACAAAACACTTTATCTACTTCTACGCTGGACAAGTTGCAATTCTTTTGTTCAAATCTGGTTAGAATGTACTGCATTGTAGTGATTATGTTAACAAAATATCTATAAAGTTTG]
[+] EMBL AW062999             [                                                                                                                                                                CATATATTAAGAAAGAATTCGACAAGAAGCATAATCCAACGTGGCATTGTGTTGTTGGGAGGAACTTTGGGAGCTACGTTACACATGAAACAAAACACTTTATCTACTTCTACGCTGGACAAGTTGCAATTCTTTTGTTCAAATCTGGTTAGAATGTACTGCATT TAGTGATTATGTTAACATTATATCTATAAAGTT  ]




>consensus_8468#0
CCTCGTTAGCTGTGGTCGTGTGTTGGTTGACTTGAGATGAGTGACGGATCCAGGAAAGCT
GTTGTCAAAAATGTAGATATGTCTGAGGAAATGCAACAAGATGCGATAGATGCAGCAACC
CAAGCATTTGAAAAGTACAACATCGAGAAAGATATTGCTGCATATATTAAGAAAGAATTC
GACAAGAAGCATAATCCAACGTGGCATTGTGTTGTTGGGAGGAACTTTGGGAGCTACGTT
ACACATGAAACAAAACACTTTATCTACTTCTACGCTGGACAAGTTGCAATTCTTTTGTTC
AAATCTGGTTAGAATGTACTGCATTTAGTGATTATGTTAACATTATATCTATAAAGTTTG

clustalw multiple alignements is not computed in this case