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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8511#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1677 fasta sequence
[CCTTAGAATGGCAAACNNCAGCGTCTATCCTNNTTCTCATATTTGNCAGCGAGAATAGCAGCAGAACGACCAAAACCTTTAGCTTGATCAGCCATCTCTTGCGTTTGTAGGTCTAACTGCTGTAACCGCTCACCACGTTCAATGGCAGCATTTCTAGCCCGTGCAATTTCAGAGGAGGCAGCACCCGTCTGACCAGATAACTTTTCTATGCGAGCATTTGGCAGTAGAGTAGTAGCGCCAGGTGTCCCCTTCCCCGAACTTGCTTCACCAATTAATTCATCTCGATCTAATGAAGACACCAAAGTTCCACTTAACAAATTTTTGAAAAAGTTTTTCTTAGGAGGTTCTGGCATATTACTTGGTAGAAATATCTCACCTTGCATATCACGTAAATTCGCACAGACATCTGATGCCCAGGTGACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCAAACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAACTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCTGTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGACTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGAGCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGTCCGTCGTGGCAATTGAGTGCTAGGAAACGCACCATACGATACGAAGTGAAAATGGTGTTTAAAGAGACGGAAGTGCTGTGGAAGTCCTGTAAATGCGATGACAGGACTACCAAATAATCACCACTGGCTTTTATTCTGAGCCATGTTCAGTGACGTTTCACTGCACTGAGTTGTACGATTGATAGGAGAAGGACCCTTGTCGAGTTACGTTGTAGTCGTGGTCGCGACCAGGACTTATTTAGATTTTGATGATGTATAGAGAAGCTGTGACGGTGTNTTACGGAGAAGGGAGAGGACGTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGATATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAGGGTATAACATGTGGAGAAGGAGCTTCACGCTGCAAATTGTACAACTTATTTTTCCAGATTCGCAGTTCAAGACCTCTATCTGACATCACATCTTATTTCACAGGTAGAACCACTAGGTATCATAAAACCATTACGAATGGAGACTATCATATACACCGGGTCATTCGACCGGCCGCC]
[-] EMBL CD116276 [CCTTAGAATGGCAAACNNCAGCGTCTATCCTNNTTCTCATATTTGNCAGCGAGAATAGCAGCAGAACGACCAAAACCTTTAGCTTGATCAGCCATCTCTTGCGTTTGTAGGTCTAACTGCTGTAACCGCTCACCACGTTCAATGGCAGCATTTCTAGCCCGTGCAATTTCAGAGGAGGCAGCACCCGTCTGACCAGATAACTTTTCTATGCGAGCATTTGGCAGTAGAGTAGTAGCGCCAGGTGTCCCCTTCCCCGAACTTGCTTCACCAATTAATTCATCTCGATCTAATGAAGACACCAAAGTTCCACTTAACAAATTTTTGAAAAAGTTTTTCTTAGGAGGTTCTGGCATATTACTTGGTAGAAATATCTCACCTTGCATATCACGTAAATTCGCACAGACATCTGATGCCCAGGTGACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCAAACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAACTCGGCAATGAGAA ]
[-] EMBL CD192430 [ GTGACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCAAACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAACTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCTGTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGACTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGAGCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGT ]
[+] EMBL CD192131 [ ACGTAAACTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCTGTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGACTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGAGCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGTCCGTCGTGGCAATTGAGTGCTAGGAAACGCACCATACGATACGAAGTGAAAATGGTGTTTAAAGAGACGGAAGTGCTGTGGAAGTCCTGTAAATGCGATGACAGGACTACCAAATAATCACCACTGGCTTTTATTCTGAGCCATGTTCAGTGACGTTTCACTGCACTGAGTTGTACGATTGATAGGAGAAGGACCCTTGTCGAGTTACGTTGTAGTCGTGGTCGCGACCAGGACTTATTTAGATTTTGATGATGTATAGAGAAGCTGTGACGGTGTNTTACGGAGAAGGGAGAGGACGTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTG ]
[+] EMBL CD090000 [ GAGGACGTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGATATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAGGGTATAACATGTGGAGAAGGAGCTTCACGCT ]
[-] EMBL CD184815 [ GTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAAC ]
[+] EMBL CD146940 [ TTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACGTGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAG ]
[+] EMBL CD170749 [ TCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGATATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAGGGTATAACATGTGGAGAAGGAGCTTCACGCTGCAAATTGTACAACTTATTTTTCCAGATTCGCAGTTCAAGACCTCTATCTGACATCACATCTTATTTCACAGGTAGAACCACTAGGTATCATAAAACCATTACGAATGGAGACTATCATATACACCGGGTCATTCGACCGGCCGCC]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||