Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8531 cluster # 8531       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8531#0 length = 1321 sequences # 7  

consensusID : consensus_8531#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1321
fasta sequence
                              [AGTGAGTCAGATTCAGATGATGAAATTAAGACTAAGGAAAAGCCGAAAGTTAAACAAAATACGAAACGATATTCTGAGAAGAAAAGGAAATGCACAGACGTCGATGATAATCAAATATCTTGCCGTAATAACTCACAGCAGTCAATAATAGACGCCTTAAAACGACAGCAAGAGTTATCCAAAATCTCCCGTGACAAGAAAGCAAATACTATTGAAGCGTACTTCTCACAGTCTGTGAAACCTAAGAAGAATGTAGTTTCCGTTGATGATTTCTTCGGATCATCTGAGAAGAAACCAAATGCCAAGCCTTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAGCTCGTGATGGTCCTCGCAGTCTCGGGTCAAGAGAAATTCCTAAGGGAACTCCAGATTGTTTAAAGGGACTGAACTTCCTCATCACAGGAATACTAGAGTGCATTGAACGAGAGGACGCCGCAAATCTTATTCAGAATTGTGGTGGTAAAGTTTTAAAGACATTAGGTAAAAAGACTGATTATCTTGTTGTCGGACGTGAACCTGGTGCAGCGAAAATTGAGAAGGCTAACAATTTGAAAATTAAGCAGATTACTGAAGAATATCTTTTTGAAATGATAGAAAAATCCAGTAATGTTCCTCTTGTACATCATAAATCTAATGTATCCAACTCAGAATCTTCCAAGAAATTGGAGCCTGTAGATGTAAATGATTGTAAACAAAAATTAAAAAGTCCTAAAAAATCTCCTAAGAAGAAAGC-ATATACTGAATCACCGGATAATGCTCTTAAATCTCATAAACATGAATCTCCGAATAAATGTGCAAGAAAATCTGTTACGTCTTTATGTAATGAACTTCCTCTTACCGCACGTCCTGTTTTAACCAATAATTCAACATTTAATAGTAAAACTGATCGAAATCATAGCAGTGGTTTATCCAAAACTCCTACTAATTTCATTGATAAGCCAGATTCCCTGTTGAAGGAGATGGGTTCAAAGTTGTCTGAATTATGGGTTGATAAGTATAAACCAACGTCTATTCGCTCACTGATTGGTCAAAACGGTGCACAAAGTCCAGCTAATCGACTTTTAAATTGGCTATCTTCCTGGCACT]

[+] EMBL CD180421             [AGTGAGTCAGATTCAGATGATGAAATTAAGACTAAGGAAAAGCCGAAAGTTAAACAAAATACGAAACGATATTCTGAGAAGAAAAGGAAATGCACAGACGTCGATGATAATCAAATATCTTGCCGTAATAACTCACAGCAGTCAATAATAGACGCCTTAAAACGACAGCAAGAGTTATCCAAAATCTCCCGTGACAAGAAAGCAAATACTATTGAAGCGTACTTCTCACAGTCTGTGAAACCTAAGAAGAATGTAGTTTCCGTTGATGATTTCTTCGGATCATCTGAGAGGAAACCAAATGCCAAGCCTTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD123674             [                                                                                                                                                                                                                                                         AATGTAGTTTCCGTTGATGATTTCTTCGGATCATCTGAGAAGAAACCAAATGCCAAGCCTTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAAAAGAAGTCATGGGAGCTTCCCCCAAACCAATGGTATTGGATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD149654             [                                                                                                                                                                                                                                                                                        ccctTGAGAAGAAACCAAATGCCAAGCCTTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAGCTCGTGATGGTCCTCGCAGTCTCGGGTCAAGAGAAATTCCTAAGGGAACTCCAGATTGTTTAAAGGGACTGAACTTCCTCATCACAGGAATACTAGAGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD149644             [                                                                                                                                                                                                                                                                                                          ATGCCAAGCCCTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAGCTCGTGATGGTCCTCGCAGTCTCGGGTCAAGAGAAATTCCTAAGGGAACTCCAGATTGTTTAAAGGGACTGAACTTCCTCATCACAGGAATACTAGAGTGCATTGAACGAGAGGACGCCGCAAATCTTATTCAGAATTGTGGTGGTAAAGTTTTAAAGACATTAGGTAAAAAGACTGATTATCTTGTTGTCGGACGTGAACCTGGTGCAGCGAAAATTGAGAAGGCTAACAATTTGAAAATTAAGCAGATTACTGAAGAATATCTTTTTGAAATGATAGAAAAATCCAGTAATGTTCCTCTTGTACATCATAAATCTAATGTATCCAACTCAGAATCTTCCAAGAAATTGGAGCCTGTAGATGTAAATGATTGTAAACAAAAATTAAAAAGTCCTAAAAAATCTCCTAAGAAGAAAGC ATATACTGAATCACCGGATAA                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD130197             [                                                                                                                                                                                                                                                                                                                          TGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD197422             [                                                                                                                                                                                                                                                                                                                                                                           CCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAGCTCGTGATGGTCCTCGCAGTCTCGGGTCAAGAGAAATTCCTAAGGGAACTCCAGATTGTTTAAAGGGACTGAACTTCCTCATCACAGGAATACTAGAGTGCATTGAACGAGAGGACGCCGCAAATCTTATTCAGAATTGTGGTGGTAAAGTTTTAAAGACATTAGGTAAAAAGACTGATTATCTTGTTGTCGGACGTGAACCTGGTGCAGCGAAAATTGAGAAGGCTAACAATTTGAAAATTAAGCAGATTACTGAAGAATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD160496             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGCACATCTTATTCATAATTGTGGTGGTAAAGTTTTAAAGACATTAGGTAAAAAGACTGATTATCTTGTTGTCGGACGTGAACCTGGTGCAGCGAAAATTGAGAAGGCTAACAATTTGAAAATTAAGCAGATTACTGAAGAATATCTTTTTGAAATGATAGAAAAATCCAGTAATGTTCCTCTTGTACATCATAAATCTAATGTATCCAACTCAGAATCTTCCAAGAAATTGGAGCCTGTAGATGTAAATGATTGTAAACAAAAATTAAAAAGTCCTAAAAAATCTCCTAAGAAG AAGCAATATACTGAATCACCGGATAATGCTCTTAAATCTCATAAACATGAATCTCCGAATAAATGTGCAAGAAAATCTGTTACGTCTTTATGTAATGAACTTCCTCTTACCGCACGTCCTGTTTTAACCAATAATTCAACATTTAATAGTAAAACTGATCGAAATCATAGCAGTGGTTTATCCAAAACTCCTACTAATTTCATTGATAAGCCAGATTCCCTGTTGAAGGAGATGGGTTCAAAGTTGTCTGAATTATGGGTTGATAAGTATAAACCAACGTCTATTCGCTCACTGATTGGTCAAAACGGTGCACAAAGTCCAGCTAATCGACTTTTAAATTGGCTATCTTCCTGGCACT]


>consensus_8531#0 AGTGAGTCAGATTCAGATGATGAAATTAAGACTAAGGAAAAGCCGAAAGTTAAACAAAAT ACGAAACGATATTCTGAGAAGAAAAGGAAATGCACAGACGTCGATGATAATCAAATATCT TGCCGTAATAACTCACAGCAGTCAATAATAGACGCCTTAAAACGACAGCAAGAGTTATCC AAAATCTCCCGTGACAAGAAAGCAAATACTATTGAAGCGTACTTCTCACAGTCTGTGAAA CCTAAGAAGAATGTAGTTTCCGTTGATGATTTCTTCGGATCATCTGAGAAGAAACCAAAT GCCAAGCCTTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGAT ACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCC CAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATG GCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGG GCCTACAAAGCTCGTGATGGTCCTCGCAGTCTCGGGTCAAGAGAAATTCCTAAGGGAACT CCAGATTGTTTAAAGGGACTGAACTTCCTCATCACAGGAATACTAGAGTGCATTGAACGA GAGGACGCCGCAAATCTTATTCAGAATTGTGGTGGTAAAGTTTTAAAGACATTAGGTAAA AAGACTGATTATCTTGTTGTCGGACGTGAACCTGGTGCAGCGAAAATTGAGAAGGCTAAC AATTTGAAAATTAAGCAGATTACTGAAGAATATCTTTTTGAAATGATAGAAAAATCCAGT AATGTTCCTCTTGTACATCATAAATCTAATGTATCCAACTCAGAATCTTCCAAGAAATTG GAGCCTGTAGATGTAAATGATTGTAAACAAAAATTAAAAAGTCCTAAAAAATCTCCTAAG AAGAAAGCATATACTGAATCACCGGATAATGCTCTTAAATCTCATAAACATGAATCTCCG AATAAATGTGCAAGAAAATCTGTTACGTCTTTATGTAATGAACTTCCTCTTACCGCACGT CCTGTTTTAACCAATAATTCAACATTTAATAGTAAAACTGATCGAAATCATAGCAGTGGT TTATCCAAAACTCCTACTAATTTCATTGATAAGCCAGATTCCCTGTTGAAGGAGATGGGT TCAAAGTTGTCTGAATTATGGGTTGATAAGTATAAACCAACGTCTATTCGCTCACTGATT GGTCAAAACGGTGCACAAAGTCCAGCTAATCGACTTTTAAATTGGCTATCTTCCTGGCAC T



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)