These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8531#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1321 fasta sequence [AGTGAGTCAGATTCAGATGATGAAATTAAGACTAAGGAAAAGCCGAAAGTTAAACAAAATACGAAACGATATTCTGAGAAGAAAAGGAAATGCACAGACGTCGATGATAATCAAATATCTTGCCGTAATAACTCACAGCAGTCAATAATAGACGCCTTAAAACGACAGCAAGAGTTATCCAAAATCTCCCGTGACAAGAAAGCAAATACTATTGAAGCGTACTTCTCACAGTCTGTGAAACCTAAGAAGAATGTAGTTTCCGTTGATGATTTCTTCGGATCATCTGAGAAGAAACCAAATGCCAAGCCTTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAGCTCGTGATGGTCCTCGCAGTCTCGGGTCAAGAGAAATTCCTAAGGGAACTCCAGATTGTTTAAAGGGACTGAACTTCCTCATCACAGGAATACTAGAGTGCATTGAACGAGAGGACGCCGCAAATCTTATTCAGAATTGTGGTGGTAAAGTTTTAAAGACATTAGGTAAAAAGACTGATTATCTTGTTGTCGGACGTGAACCTGGTGCAGCGAAAATTGAGAAGGCTAACAATTTGAAAATTAAGCAGATTACTGAAGAATATCTTTTTGAAATGATAGAAAAATCCAGTAATGTTCCTCTTGTACATCATAAATCTAATGTATCCAACTCAGAATCTTCCAAGAAATTGGAGCCTGTAGATGTAAATGATTGTAAACAAAAATTAAAAAGTCCTAAAAAATCTCCTAAGAAGAAAGC-ATATACTGAATCACCGGATAATGCTCTTAAATCTCATAAACATGAATCTCCGAATAAATGTGCAAGAAAATCTGTTACGTCTTTATGTAATGAACTTCCTCTTACCGCACGTCCTGTTTTAACCAATAATTCAACATTTAATAGTAAAACTGATCGAAATCATAGCAGTGGTTTATCCAAAACTCCTACTAATTTCATTGATAAGCCAGATTCCCTGTTGAAGGAGATGGGTTCAAAGTTGTCTGAATTATGGGTTGATAAGTATAAACCAACGTCTATTCGCTCACTGATTGGTCAAAACGGTGCACAAAGTCCAGCTAATCGACTTTTAAATTGGCTATCTTCCTGGCACT] [+] EMBL CD180421 [AGTGAGTCAGATTCAGATGATGAAATTAAGACTAAGGAAAAGCCGAAAGTTAAACAAAATACGAAACGATATTCTGAGAAGAAAAGGAAATGCACAGACGTCGATGATAATCAAATATCTTGCCGTAATAACTCACAGCAGTCAATAATAGACGCCTTAAAACGACAGCAAGAGTTATCCAAAATCTCCCGTGACAAGAAAGCAAATACTATTGAAGCGTACTTCTCACAGTCTGTGAAACCTAAGAAGAATGTAGTTTCCGTTGATGATTTCTTCGGATCATCTGAGAGGAAACCAAATGCCAAGCCTTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACA ] [+] EMBL CD123674 [ AATGTAGTTTCCGTTGATGATTTCTTCGGATCATCTGAGAAGAAACCAAATGCCAAGCCTTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAAAAGAAGTCATGGGAGCTTCCCCCAAACCAATGGTATTGGATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAG ] [+] EMBL CD149654 [ ccctTGAGAAGAAACCAAATGCCAAGCCTTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAGCTCGTGATGGTCCTCGCAGTCTCGGGTCAAGAGAAATTCCTAAGGGAACTCCAGATTGTTTAAAGGGACTGAACTTCCTCATCACAGGAATACTAGAGTGC ] [+] EMBL CD149644 [ ATGCCAAGCCCTGTGCTGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAGCTCGTGATGGTCCTCGCAGTCTCGGGTCAAGAGAAATTCCTAAGGGAACTCCAGATTGTTTAAAGGGACTGAACTTCCTCATCACAGGAATACTAGAGTGCATTGAACGAGAGGACGCCGCAAATCTTATTCAGAATTGTGGTGGTAAAGTTTTAAAGACATTAGGTAAAAAGACTGATTATCTTGTTGTCGGACGTGAACCTGGTGCAGCGAAAATTGAGAAGGCTAACAATTTGAAAATTAAGCAGATTACTGAAGAATATCTTTTTGAAATGATAGAAAAATCCAGTAATGTTCCTCTTGTACATCATAAATCTAATGTATCCAACTCAGAATCTTCCAAGAAATTGGAGCCTGTAGATGTAAATGATTGTAAACAAAAATTAAAAAGTCCTAAAAAATCTCCTAAGAAGAAAGC ATATACTGAATCACCGGATAA ] [-] EMBL CD130197 [ TGTCGCCAACACACCACCTCATTCACCGATGGAGATCATCCCGGATACGCCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAA ] [+] EMBL CD197422 [ CCAGTATTATCTCCGAAAACACCTTTGGGGATCAGAGGAAGTCATGGGAGCTCACCCCAAACCAATGTTATTGTATTGGAAAGCGTGAAGACAACTAGTAATCAAACGTCGTCCATGGCTAATGAATCTCTTAATGATAGCATTGAAATTGCTGTAAAAGATCGAAAGCATTTTTGGGCCTACAAAGCTCGTGATGGTCCTCGCAGTCTCGGGTCAAGAGAAATTCCTAAGGGAACTCCAGATTGTTTAAAGGGACTGAACTTCCTCATCACAGGAATACTAGAGTGCATTGAACGAGAGGACGCCGCAAATCTTATTCAGAATTGTGGTGGTAAAGTTTTAAAGACATTAGGTAAAAAGACTGATTATCTTGTTGTCGGACGTGAACCTGGTGCAGCGAAAATTGAGAAGGCTAACAATTTGAAAATTAAGCAGATTACTGAAGAATATC ] [+] EMBL CD160496 [ CCGCACATCTTATTCATAATTGTGGTGGTAAAGTTTTAAAGACATTAGGTAAAAAGACTGATTATCTTGTTGTCGGACGTGAACCTGGTGCAGCGAAAATTGAGAAGGCTAACAATTTGAAAATTAAGCAGATTACTGAAGAATATCTTTTTGAAATGATAGAAAAATCCAGTAATGTTCCTCTTGTACATCATAAATCTAATGTATCCAACTCAGAATCTTCCAAGAAATTGGAGCCTGTAGATGTAAATGATTGTAAACAAAAATTAAAAAGTCCTAAAAAATCTCCTAAGAAG AAGCAATATACTGAATCACCGGATAATGCTCTTAAATCTCATAAACATGAATCTCCGAATAAATGTGCAAGAAAATCTGTTACGTCTTTATGTAATGAACTTCCTCTTACCGCACGTCCTGTTTTAACCAATAATTCAACATTTAATAGTAAAACTGATCGAAATCATAGCAGTGGTTTATCCAAAACTCCTACTAATTTCATTGATAAGCCAGATTCCCTGTTGAAGGAGATGGGTTCAAAGTTGTCTGAATTATGGGTTGATAAGTATAAACCAACGTCTATTCGCTCACTGATTGGTCAAAACGGTGCACAAAGTCCAGCTAATCGACTTTTAAATTGGCTATCTTCCTGGCACT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||