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Schistosoma mansoni
cluster # 8697 cluster # 8697       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8697#0 length = 1739 sequences # 7  

consensusID : consensus_8697#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1739
fasta sequence
                              [AATGACGCGTTATGCACTTCAGTAAAGTTAATGGCAATGAACCTCATTATAAAATGCCCGCAAAATCCATTTTTCCCAATCATGACGTTGTGAAAGGATCTAGTACAGACGTTGCTCCTTTGGAACATCTTTTTGTAACTAAATTTTCAAAGTTGACTATTGATGATGAATATAAGTATAATCTAGCTTATTTAGTCACTGAAAATAATGGAACAACTCCAGTCGTTAAAAGTTCTCAGACTGAAAAGCAGCGATCAGTCACATCGAATACAAAACCTCTTAACCGCATCCATGTTGATTCTATTCAACGTAAATCTGAACCAGTTATTCATACAGACCACAGAGATTTCCACCGATCATGTAGATACAGAAGACAAAAACCATTGCGTGGGAAAGTTGCAGCCCGTCACAGTTCTCCTGTCTATATTAGTAGTCCTGAATCTTATGAACATATGTCATCAGACTTTGATGATCGAAGAGAATTCGACCACAGTTCATTCGCAAAGCATCTGTCAAA-AGTACAT-G-ATAATAATGGAAT-TAACCAAAGTCATTTTTTTGAACATAAGAAAGCTCTTGTGCTAAATAATGCTCCTTTAGATACCACTTCCTCCAAATTAAATTGTTGTACCTTAAAATGCCCAACAAGTTTAAATATCGATTCACCCTTATGTGAATTAAAGAACAATTTGAAAGTCCAAAAGCCAAATCCAAACACAAAAAACATTGTGTCACGTCGTGAAACTTCCCGAACAATTGAAAAAACACTTCGACAAGCANACAATCGTGTGGAATCCATGANAATAGAAGTANATGCTCCGGATCCATTGATGAGAGATGATTTTTGCTCTCATGATGNTGCATCTAGAGTTAAAGCATTCAAGGCACTCATGAAATCAGAAGAATTAGAAAGCATTGATCAAAATAGTGAAACAAAGTCAATCAAAAAGGTCACAGATGAACGAAAAATACCTGATGTACCATATCAGGAAAATCATATTGGTCTTCGTCGATCCAAAACGTTTTCTGGTGAACAAATGTCAAGAATATATCAAAAACATTATTTGCAATATATGGATTTATGCTTTGATTGTGGAAAACGTATTTATCCTGTAGATCGTATATCTACCGGTGAACGAGTTTATCATAAATCATGTTTTCGTTGTGCAACATGTCAAAGGACATTATTAGTTGGCAATTTCGCATCATTAGATGGAGTAATATTTTGTAAACCACATTATATAGAACAATTTCATATGAGTGCAGGTCGTTATGAATATCGTCAAAGTCTTAATCAATCTGCACCATTGTCATCAGTCTTTCGTGTACAAGGAGAATATTAAGATAATTCTTATTGTTTACATTGTCAACTATTCCTACATTAGAATTTTTCAATGAAACATTCGTATTATATAATTTCTACTATGGAGAAAAACATCAGATTATTTAACAGCAAAAAACAAGACAACGTTGAATTCCGGCATTGTTTGTATACTAATCATATTGCACAATTAACAAATCAATTAGCCAAATTGATTCCTTGAAATTCTTTTCTTTATCATTGAATATGATAACAGACTTTACTTTTATTAATTTTCAAAACTTCAAGTGTCAGGAATTTCCGATATATAGATTCAGGTTCTCCTTATTTCTGAAATTCCTG-ACACTTTAATTTCCTTCATTTATTGATTGTTAATTATTTATACATTTTTGTTATTTATTTATAGAAAGAGTAATATCAT]

[+] EMBL CD129574             [AATGACGCGTTATGCACTTCAGTAAAGTTAATGGCAATGAACCTCATTATAAAATGCCCGCAAAATCCATTTTTCCCAATCATGACGTTGTGAAAGGATCTAGTACAGACGTTGCTCCTTTGGAACATCTTTTTGTAACTAAATTTTCAAAGTTGACTATTGATGATGAATATAAGTATAATCTAGCTTATTTAGTCACTGAAAATAATGGAACAACTCCAGTCGTTAAAAGTTCTCAGACTGAAAAGCAGCGATCAGTCACATCGAATACAAAACCTCTTAACCGCATCCATGTTGATTCTATTCAACGTAAATCTGAACCAGTTATTCATACAGACCACAGAGATTTCCACCGATCATGTAGATACAGAAGACAAAAACCATTGCGTGGGAAAGTTGCAGCCCGTCACAGTTCTCCTGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD078715             [                                                                                                                                                                                                                                                 TGAAAAGCAGCGATCAGTCACATCGAATACAAAACCTCTTAACCGCATCCATGTTGATTCTATTCAACGTAAATCTGAACCAGTTATTCATACAGACCACAGAGGTTTCCACCGATCATGTAGATACAGAAGACAAAAACCATTGCGTGGGAAAGTTGCAGCCCGTCACAGTTCTCCTGTCTATATTAGTAGTCCTGAATCTTATGAACATATGTCATCAGACTTTGATGATCGAAGAGAATTCGACCACAGTTCATTCGCAAAGCATCTGTCAAA AGTACAT G ATAATAATGGAAT TAACCAAAGTCATTTTTTTGAACATAAGAAAGCTCTTGTGCTAAATAATGCTCCTTTAGATACCACTTCCTCCAAATTAAATTGTTGTACCTTAAAATGCCCAACAAGTTTAAATATCGATTCACCCTTATGTGAATTAAAGAACAATTTGAAAGTCCAAAAGCCAAATCCAAACACAAAAAACATTGTGTCACGTCGTGAAACTTCCCGAACAATTGAAAAAACACTTCGACAAGCANACAATCGTGTGGAATCCATGANAATAGAAGTANATGCTCCGGATCCATTGATGAGAGATGATTTTTGCTCTCATGATGNTGCATCTAGAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD065698             [                                                                                                                                                                                                                                                                                                                                                                       TGTAGATACAGAAGACAAAAACCATTGCGTGGGAAAGTTGCAGCCCGTCACAGTTCTCCTGTCTATATTAGTAGTCCTGAATCTTATGAACATATGTCATCAGACTTTGATGATCGAAGAGAATTCGACCACAGTTCATTCGCAAAGCATCTGTCAAA AGTACAT G ATAATAATGGAAT TAACCAAAGTCATTTTTTTGAACATAAGAAAGCTCTTGTGCTAAATAATGCTCCTTTAGATACCACTTCCTCCAAATTAAATTGTTGTACCTTAAAATGCCC AC AGTTT AATATCGATTCACCC TATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD063590             [                                                                                                                                                                                                                                                                                                                                                                                                                                               AGTCCTGAATCTTATGAACATATGTCATCAGACTTTGATGATCGAAGAGAATTCGACCACAGTTCATTCGCAAAGCATCTGTCAAACAGTACATAGCATAATAATGGAATNTAACCAAAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD078653             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATGAAAATAGAAGTAAATGCTCCGGATCCATTGATGAGAGATGATTTTTGCTCTCATGATGTTGCATCTAGAGTTAAAGCATTCAAGGCACTCATGAAATCAGAAGAATTAGAAAGCATTGATCAAAATAGTGAAACAAAGTCAATCAAAAAGGTCACAGATGAACGAAAAATACCTGATGTACCATATCAGGAAAATCATATTGGTCTTCGTCGATCCAAAACGTTTTCTGGTGAACAAATGTCAAGAATATATCAAAAACATTATTTGCAATATATGGATTTATGCTTTGATTGTGGAAAACGTATTTATCCTGTAGATCGTATATCTACCGGTGAACGAGTTTATCATAAATCATGTTTTCGATGTGCAACATGTCAAAGGACATTATTAGTTGGCAATTTCGCATCATTAGATGGAGTAATATTTTGTAAACCACATTATATAGAACAATTTCATATGAGTGCAGGTCGTTATGAATATCGTCAAAGTCTTAATCAATCTGCACCATTGTCATCAGTCTTTCGTGTACAAGGAGAATATTAAGATAATTCTTATTGTTTACATTGTCAACTATTCCTAC                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD073178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTTGA TGTGGAAAACGTATTTATCCTGTAGATCGTATATCTACCGGTGAACGAGTTTATCATAAATCATGTTTTCGTTGTGCAACATGTCAAAGGACATTATTAGTTGGCAATTTCGCATCATTAGATGGAGTAATATTTTGTAAACCACATTATATAGAACAATTTCATATGAGTGCAGGTCGTTATGAATATCGTCAAAGTCTTAATCAATCTGCACCATTGTCATCAGTCTTTCGTGTACAAGGAGAATATTAAGATAATTCTTATTGTTTACATTGTCAACTATTCCTACATTAGAATTTTTCAATGAAACATTCGTATTATATAATTTCTACTATGGAGAAAAACATCAGATTATTTAACAGCAAAAAACAAGACAACGTTGAATTCCGGCATTGTTTGTATACTAATCATATTGCACAATTAACAAATCAATTAGCCAAATTGATTCCTTGAAATTCTTTTCTTTATCATTGAATATGATAACAGACTTTACTTTTATTAATTTTCAAAACTTCAAGTGTCAGGAATTTCCGATATATAGATTCAGGTTCTCCTTATTTCTGAAATTCCTG ACACTT                                                                         ]
[-] EMBL CD073116             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTTATCATAAATCATGTTTTCGTTGTGCAACATGTCAAAGGACATTATTAGTTGGCAATTTCGCATCATTAGATGGAGTAATATTTTGTAAACCACATTATATAGAACAATTTCATATGAGTGCAGGTCGTTATGAATATCGTCAAAGTCTTAATCAATGTGCACCATTGTCATCAGTCTTTCGTGTACAAGGAGAATATTAAGATAATTCTTATTGTTTACATTGTCAACTATTCCTACATTAGAATTTTTCAATGAAACATTCGTATTATATAATTTCTACTATGGAGAAAAACATCAGATTATTTAACAGCAAAAAACAAGACAACGTTGAATTCCGGCATTGTTTGTATACTAATCATATTGCCCAATTATCAAATCAATTAGCCAAATTGATTCCTTGAAATTCTTTTCTTTATCATTGAATATGATAACAGACTTTACTTTTATTAATTTTCAAAACTTCAAGTGTCAGGAATTTCCGATATATAGATTCAGGTTCTCCTTATTTCTGAAATTTCTGTAC GTATAATTTCCTTCATTTATTGATTGTTAATTATTTATACATTTTTGTTATTTATTTATAGAAAGAGTAATATCAT]


>consensus_8697#0 AATGACGCGTTATGCACTTCAGTAAAGTTAATGGCAATGAACCTCATTATAAAATGCCCG CAAAATCCATTTTTCCCAATCATGACGTTGTGAAAGGATCTAGTACAGACGTTGCTCCTT TGGAACATCTTTTTGTAACTAAATTTTCAAAGTTGACTATTGATGATGAATATAAGTATA ATCTAGCTTATTTAGTCACTGAAAATAATGGAACAACTCCAGTCGTTAAAAGTTCTCAGA CTGAAAAGCAGCGATCAGTCACATCGAATACAAAACCTCTTAACCGCATCCATGTTGATT CTATTCAACGTAAATCTGAACCAGTTATTCATACAGACCACAGAGATTTCCACCGATCAT GTAGATACAGAAGACAAAAACCATTGCGTGGGAAAGTTGCAGCCCGTCACAGTTCTCCTG TCTATATTAGTAGTCCTGAATCTTATGAACATATGTCATCAGACTTTGATGATCGAAGAG AATTCGACCACAGTTCATTCGCAAAGCATCTGTCAAAAGTACATGATAATAATGGAATTA ACCAAAGTCATTTTTTTGAACATAAGAAAGCTCTTGTGCTAAATAATGCTCCTTTAGATA CCACTTCCTCCAAATTAAATTGTTGTACCTTAAAATGCCCAACAAGTTTAAATATCGATT CACCCTTATGTGAATTAAAGAACAATTTGAAAGTCCAAAAGCCAAATCCAAACACAAAAA ACATTGTGTCACGTCGTGAAACTTCCCGAACAATTGAAAAAACACTTCGACAAGCANACA ATCGTGTGGAATCCATGANAATAGAAGTANATGCTCCGGATCCATTGATGAGAGATGATT TTTGCTCTCATGATGNTGCATCTAGAGTTAAAGCATTCAAGGCACTCATGAAATCAGAAG AATTAGAAAGCATTGATCAAAATAGTGAAACAAAGTCAATCAAAAAGGTCACAGATGAAC GAAAAATACCTGATGTACCATATCAGGAAAATCATATTGGTCTTCGTCGATCCAAAACGT TTTCTGGTGAACAAATGTCAAGAATATATCAAAAACATTATTTGCAATATATGGATTTAT GCTTTGATTGTGGAAAACGTATTTATCCTGTAGATCGTATATCTACCGGTGAACGAGTTT ATCATAAATCATGTTTTCGTTGTGCAACATGTCAAAGGACATTATTAGTTGGCAATTTCG CATCATTAGATGGAGTAATATTTTGTAAACCACATTATATAGAACAATTTCATATGAGTG CAGGTCGTTATGAATATCGTCAAAGTCTTAATCAATCTGCACCATTGTCATCAGTCTTTC GTGTACAAGGAGAATATTAAGATAATTCTTATTGTTTACATTGTCAACTATTCCTACATT AGAATTTTTCAATGAAACATTCGTATTATATAATTTCTACTATGGAGAAAAACATCAGAT TATTTAACAGCAAAAAACAAGACAACGTTGAATTCCGGCATTGTTTGTATACTAATCATA TTGCACAATTAACAAATCAATTAGCCAAATTGATTCCTTGAAATTCTTTTCTTTATCATT GAATATGATAACAGACTTTACTTTTATTAATTTTCAAAACTTCAAGTGTCAGGAATTTCC GATATATAGATTCAGGTTCTCCTTATTTCTGAAATTCCTGACACTTTAATTTCCTTCATT TATTGATTGTTAATTATTTATACATTTTTGTTATTTATTTATAGAAAGAGTAATATCAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)