These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8697#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1739 fasta sequence [AATGACGCGTTATGCACTTCAGTAAAGTTAATGGCAATGAACCTCATTATAAAATGCCCGCAAAATCCATTTTTCCCAATCATGACGTTGTGAAAGGATCTAGTACAGACGTTGCTCCTTTGGAACATCTTTTTGTAACTAAATTTTCAAAGTTGACTATTGATGATGAATATAAGTATAATCTAGCTTATTTAGTCACTGAAAATAATGGAACAACTCCAGTCGTTAAAAGTTCTCAGACTGAAAAGCAGCGATCAGTCACATCGAATACAAAACCTCTTAACCGCATCCATGTTGATTCTATTCAACGTAAATCTGAACCAGTTATTCATACAGACCACAGAGATTTCCACCGATCATGTAGATACAGAAGACAAAAACCATTGCGTGGGAAAGTTGCAGCCCGTCACAGTTCTCCTGTCTATATTAGTAGTCCTGAATCTTATGAACATATGTCATCAGACTTTGATGATCGAAGAGAATTCGACCACAGTTCATTCGCAAAGCATCTGTCAAA-AGTACAT-G-ATAATAATGGAAT-TAACCAAAGTCATTTTTTTGAACATAAGAAAGCTCTTGTGCTAAATAATGCTCCTTTAGATACCACTTCCTCCAAATTAAATTGTTGTACCTTAAAATGCCCAACAAGTTTAAATATCGATTCACCCTTATGTGAATTAAAGAACAATTTGAAAGTCCAAAAGCCAAATCCAAACACAAAAAACATTGTGTCACGTCGTGAAACTTCCCGAACAATTGAAAAAACACTTCGACAAGCANACAATCGTGTGGAATCCATGANAATAGAAGTANATGCTCCGGATCCATTGATGAGAGATGATTTTTGCTCTCATGATGNTGCATCTAGAGTTAAAGCATTCAAGGCACTCATGAAATCAGAAGAATTAGAAAGCATTGATCAAAATAGTGAAACAAAGTCAATCAAAAAGGTCACAGATGAACGAAAAATACCTGATGTACCATATCAGGAAAATCATATTGGTCTTCGTCGATCCAAAACGTTTTCTGGTGAACAAATGTCAAGAATATATCAAAAACATTATTTGCAATATATGGATTTATGCTTTGATTGTGGAAAACGTATTTATCCTGTAGATCGTATATCTACCGGTGAACGAGTTTATCATAAATCATGTTTTCGTTGTGCAACATGTCAAAGGACATTATTAGTTGGCAATTTCGCATCATTAGATGGAGTAATATTTTGTAAACCACATTATATAGAACAATTTCATATGAGTGCAGGTCGTTATGAATATCGTCAAAGTCTTAATCAATCTGCACCATTGTCATCAGTCTTTCGTGTACAAGGAGAATATTAAGATAATTCTTATTGTTTACATTGTCAACTATTCCTACATTAGAATTTTTCAATGAAACATTCGTATTATATAATTTCTACTATGGAGAAAAACATCAGATTATTTAACAGCAAAAAACAAGACAACGTTGAATTCCGGCATTGTTTGTATACTAATCATATTGCACAATTAACAAATCAATTAGCCAAATTGATTCCTTGAAATTCTTTTCTTTATCATTGAATATGATAACAGACTTTACTTTTATTAATTTTCAAAACTTCAAGTGTCAGGAATTTCCGATATATAGATTCAGGTTCTCCTTATTTCTGAAATTCCTG-ACACTTTAATTTCCTTCATTTATTGATTGTTAATTATTTATACATTTTTGTTATTTATTTATAGAAAGAGTAATATCAT] [+] EMBL CD129574 [AATGACGCGTTATGCACTTCAGTAAAGTTAATGGCAATGAACCTCATTATAAAATGCCCGCAAAATCCATTTTTCCCAATCATGACGTTGTGAAAGGATCTAGTACAGACGTTGCTCCTTTGGAACATCTTTTTGTAACTAAATTTTCAAAGTTGACTATTGATGATGAATATAAGTATAATCTAGCTTATTTAGTCACTGAAAATAATGGAACAACTCCAGTCGTTAAAAGTTCTCAGACTGAAAAGCAGCGATCAGTCACATCGAATACAAAACCTCTTAACCGCATCCATGTTGATTCTATTCAACGTAAATCTGAACCAGTTATTCATACAGACCACAGAGATTTCCACCGATCATGTAGATACAGAAGACAAAAACCATTGCGTGGGAAAGTTGCAGCCCGTCACAGTTCTCCTGTCT ] [+] EMBL CD078715 [ TGAAAAGCAGCGATCAGTCACATCGAATACAAAACCTCTTAACCGCATCCATGTTGATTCTATTCAACGTAAATCTGAACCAGTTATTCATACAGACCACAGAGGTTTCCACCGATCATGTAGATACAGAAGACAAAAACCATTGCGTGGGAAAGTTGCAGCCCGTCACAGTTCTCCTGTCTATATTAGTAGTCCTGAATCTTATGAACATATGTCATCAGACTTTGATGATCGAAGAGAATTCGACCACAGTTCATTCGCAAAGCATCTGTCAAA AGTACAT G ATAATAATGGAAT TAACCAAAGTCATTTTTTTGAACATAAGAAAGCTCTTGTGCTAAATAATGCTCCTTTAGATACCACTTCCTCCAAATTAAATTGTTGTACCTTAAAATGCCCAACAAGTTTAAATATCGATTCACCCTTATGTGAATTAAAGAACAATTTGAAAGTCCAAAAGCCAAATCCAAACACAAAAAACATTGTGTCACGTCGTGAAACTTCCCGAACAATTGAAAAAACACTTCGACAAGCANACAATCGTGTGGAATCCATGANAATAGAAGTANATGCTCCGGATCCATTGATGAGAGATGATTTTTGCTCTCATGATGNTGCATCTAGAGTT ] [-] EMBL CD065698 [ TGTAGATACAGAAGACAAAAACCATTGCGTGGGAAAGTTGCAGCCCGTCACAGTTCTCCTGTCTATATTAGTAGTCCTGAATCTTATGAACATATGTCATCAGACTTTGATGATCGAAGAGAATTCGACCACAGTTCATTCGCAAAGCATCTGTCAAA AGTACAT G ATAATAATGGAAT TAACCAAAGTCATTTTTTTGAACATAAGAAAGCTCTTGTGCTAAATAATGCTCCTTTAGATACCACTTCCTCCAAATTAAATTGTTGTACCTTAAAATGCCC AC AGTTT AATATCGATTCACCC TATGTG ] [+] EMBL CD063590 [ AGTCCTGAATCTTATGAACATATGTCATCAGACTTTGATGATCGAAGAGAATTCGACCACAGTTCATTCGCAAAGCATCTGTCAAACAGTACATAGCATAATAATGGAATNTAACCAAAGTC ] [+] EMBL CD078653 [ ATGAAAATAGAAGTAAATGCTCCGGATCCATTGATGAGAGATGATTTTTGCTCTCATGATGTTGCATCTAGAGTTAAAGCATTCAAGGCACTCATGAAATCAGAAGAATTAGAAAGCATTGATCAAAATAGTGAAACAAAGTCAATCAAAAAGGTCACAGATGAACGAAAAATACCTGATGTACCATATCAGGAAAATCATATTGGTCTTCGTCGATCCAAAACGTTTTCTGGTGAACAAATGTCAAGAATATATCAAAAACATTATTTGCAATATATGGATTTATGCTTTGATTGTGGAAAACGTATTTATCCTGTAGATCGTATATCTACCGGTGAACGAGTTTATCATAAATCATGTTTTCGATGTGCAACATGTCAAAGGACATTATTAGTTGGCAATTTCGCATCATTAGATGGAGTAATATTTTGTAAACCACATTATATAGAACAATTTCATATGAGTGCAGGTCGTTATGAATATCGTCAAAGTCTTAATCAATCTGCACCATTGTCATCAGTCTTTCGTGTACAAGGAGAATATTAAGATAATTCTTATTGTTTACATTGTCAACTATTCCTAC ] [-] EMBL CD073178 [ CTTTGA TGTGGAAAACGTATTTATCCTGTAGATCGTATATCTACCGGTGAACGAGTTTATCATAAATCATGTTTTCGTTGTGCAACATGTCAAAGGACATTATTAGTTGGCAATTTCGCATCATTAGATGGAGTAATATTTTGTAAACCACATTATATAGAACAATTTCATATGAGTGCAGGTCGTTATGAATATCGTCAAAGTCTTAATCAATCTGCACCATTGTCATCAGTCTTTCGTGTACAAGGAGAATATTAAGATAATTCTTATTGTTTACATTGTCAACTATTCCTACATTAGAATTTTTCAATGAAACATTCGTATTATATAATTTCTACTATGGAGAAAAACATCAGATTATTTAACAGCAAAAAACAAGACAACGTTGAATTCCGGCATTGTTTGTATACTAATCATATTGCACAATTAACAAATCAATTAGCCAAATTGATTCCTTGAAATTCTTTTCTTTATCATTGAATATGATAACAGACTTTACTTTTATTAATTTTCAAAACTTCAAGTGTCAGGAATTTCCGATATATAGATTCAGGTTCTCCTTATTTCTGAAATTCCTG ACACTT ] [-] EMBL CD073116 [ GTTTATCATAAATCATGTTTTCGTTGTGCAACATGTCAAAGGACATTATTAGTTGGCAATTTCGCATCATTAGATGGAGTAATATTTTGTAAACCACATTATATAGAACAATTTCATATGAGTGCAGGTCGTTATGAATATCGTCAAAGTCTTAATCAATGTGCACCATTGTCATCAGTCTTTCGTGTACAAGGAGAATATTAAGATAATTCTTATTGTTTACATTGTCAACTATTCCTACATTAGAATTTTTCAATGAAACATTCGTATTATATAATTTCTACTATGGAGAAAAACATCAGATTATTTAACAGCAAAAAACAAGACAACGTTGAATTCCGGCATTGTTTGTATACTAATCATATTGCCCAATTATCAAATCAATTAGCCAAATTGATTCCTTGAAATTCTTTTCTTTATCATTGAATATGATAACAGACTTTACTTTTATTAATTTTCAAAACTTCAAGTGTCAGGAATTTCCGATATATAGATTCAGGTTCTCCTTATTTCTGAAATTTCTGTAC GTATAATTTCCTTCATTTATTGATTGTTAATTATTTATACATTTTTGTTATTTATTTATAGAAAGAGTAATATCAT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||