Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8748 cluster # 8748       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8748#0 length = 628 sequences # 7  

consensusID : consensus_8748#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 628
fasta sequence
                              [GGAGAGCATGATGGAATGATGAAATTTGCTGATGCTGTTGATATACATGAGGAGAATGAGTTAAATTTGAAGTATTATGGGAGCTTCTAAGCATAACGTTAGGAAGGTTTTCTTGGCAATCAGTCGGTAATAACTGTTGCTGACTCGATGAATTAAGACTGGGATTGTCAGGCTGAATATTAGGAGTTAAAACATGTACGGGTGAAGCACTAGTTAACGGCAGGCTGTTCGATACAACCGGGACGTAGGAGTTTGGACGACTAGCAGGTTCATGGTGGCTGCTAACTAAGCTTGTTAGACTTCCTGGTGGAGTCCACTCACTAGGTGCCTCAGTAATTTTCAGTAAAGCACAAATTCCTTTTACTGGAGTAACATTATCTGCCGAGGATATAGACAATGTTGTTCTCGAAGGGATAACGGTACAAGTAGGCTTGGCATTAAGAGATTGATGAGATGTGAGTGTATCCATTCGATACCCTTGAGGTATGAAGGTATTAAATCCAGTAATAAGATCGGGATGACCCTCGAACAATTCACGTACCCGACGAATAACAACCTCCGTCCCAATGGTTTGTGCCTTGAAATCACGCATAACATCAAGAAAGTCCATATAGATAGCCCCCTGGCC]

[-] EMBL CD130288             [GGAGAGCATGATGGAATGATGAAATTTGCTGATGCTGTTGATATACATGAGGAGAATGAGTTAAATTTGAAGTATTATGGGAGCTTCTAAGCATAACGTTAGGAAGGTTTTCTTGGCAATCAGTCGGTAATAACTGTTGCTGACTCGATGAATTAAGACTGGGATTGTCAGGCTGAATATTAGGAGTTAAAACATGTACGGGTGAAGCACTAGTTAACGGCAGGCTGTTCGATACAACCGGGACGTAGGAGTTTGGACGACTAGCAGGTTCATGGTGGCTGC                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD140969             [                 GATTGAATTAGCTGATGCTGTTGATATACATGAGGAGAATGAGTTAAATTTGAAGTATTATGAGAGCTTCTAAGCATAACGTTAGGAAGGTTTTCTTGGCAATCAGTCGGTAATCACTGTTGCTGACTCGATGAATTAAGTCTGGGATTGTCAGGCTGAATATTAGGAGTTAAAACATGTGCGGGTGAAGCTCTAGTTAGCGGCAGGCTGTTCGATACATCCGGGTCGTAGG                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD142436             [                            CTGATGCTGTTGATATACATGAGGAGAATGAGTTAAATTTGAAGTATTATGGGAGCTTCTAAGCATAACGTTAGGAAGGTTTTCTTGGCAATCAGTCGGTAATAACTGTTGCTGACTCGATGAATTAAGACTGGGATTGTCAGGCTGAATATTAGGAGTTAAAACATGTACGGGTGAAGCACTAGTTAACGGCAGGCTGTTCGATACAACCGGGACGTAGGAGTTTGGACGACTAGCAGGTTCATGGTGGCTGCTAACTAAGCTTGTTAGACTTCCT                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD160163             [                                                                                                                                                                                       GAGTTAAAACATGTACGGGTGAAGCACTAGTTAACGGCAGGCTGTTCGATACAACCGGGACGTAGGAGTTTGGACGACTAGCAGGTTCATGGTGGCTGCTAACTAAGCTTGTTAGACTTCCTGGTGGAGTCCACTCACTAGGTGCCTCAGTAATTTTCAGTAAAGCACAGATTCCTTTTACTGGAGTAACATTATCTGCCGAGGATATAGACAATGTTGTTCTCGAAGGGATAACGGTACAAGTAGGCTTGGCATTAAGAGATTGATGAGATGTGAGTGTATCCATTCGATACCCTTGAGGTATGAAGGTATTAAATCCAGTAATAAGATCGGGATGACCCTCGAACAATTCACGTACCCGACGAATAACAACCTCCGTCCCAATGGTTTGTGCCTTGAAATCACGCATAACATCAAGAAAGTCCATATAGATTGCCCCCT    ]
[-] EMBL CD177792             [                                                                                                                                                                                        AGTTAAAACATGTACGGGTGGAGCACTAGTTAACGGCAGGCTGTTCGATACAACCGGGACGTAGGAGTTTGGACGACTAGCAGGTTCATGGTGGCTGCTAACTAAGCTTGTTAGACTTCCTGGTGGAGTCCACTCACTAGGTGCCTCAGTAATTTTCAGTAAAGCACAAATTCCTTTTA                                                                                                                                                                                                                                                                         ]
[+] EMBL CD160159             [                                                                                                                                                                                                                                           AACCGGGACGTAGGAGTTTGGACGACTAGCAGGTTCATGGTGGCTGCTAACTAAGCTTGTTAGACTTCCTGGTGGAGTCCACTCACTAGGTGCCTCAGTAATTTTCAGTAAAGCACAAATTCCTTTTACTGGAGTAACATTATCTGCCGAGGATATAGACAATGTTGTTCTCGAAGGGATAATGGTACAAGTAGGCTTGGCATTAAGAGATTGATGAGATGTGAGTGTATCCATTCGATACCCTTGAGGTATGAAGGTATTAAATCCAGTAATAAGATCGGGATGACCCTCGAACAATTCACGTACCCGACGAATAACAACCTCCGTCCCAATGGTTTGTGCCTTGAAATCACGCATAACATCAAGAAAGTCCATATAGATAGCCCCCTGGC ]
[-] EMBL CD159979             [                                                                                                                                                                                                                                                                                           AACTAAGCTTGTTAGACTTCCTGGTGGAGTCCACTCACTAGGTGCCTCAGTAATTTTCAGTAAAGCACAAATTCCTTTTACTGGAGTAACATGATCTGCCGAGGATATAGACAATGTTGTTCTCGAAGGGATAACGGTACAAGTAGGCTTGGCATTAAGAGATTGATGAGATGTGAGTGTATCCATTCGATACCCTTGAGGTATGAAGGTATTAAATCCAGTAATAAGATCGGGATGACCCTCGAACAATTCACGTACCCGACGAATAACAACCTCCGTCCCAATGGTTTGTGCCTTGAAATCACGCATAACATCAAGAAAGTCCATATAGATAGCCCCCTGGCC]


>consensus_8748#0 GGAGAGCATGATGGAATGATGAAATTTGCTGATGCTGTTGATATACATGAGGAGAATGAG TTAAATTTGAAGTATTATGGGAGCTTCTAAGCATAACGTTAGGAAGGTTTTCTTGGCAAT CAGTCGGTAATAACTGTTGCTGACTCGATGAATTAAGACTGGGATTGTCAGGCTGAATAT TAGGAGTTAAAACATGTACGGGTGAAGCACTAGTTAACGGCAGGCTGTTCGATACAACCG GGACGTAGGAGTTTGGACGACTAGCAGGTTCATGGTGGCTGCTAACTAAGCTTGTTAGAC TTCCTGGTGGAGTCCACTCACTAGGTGCCTCAGTAATTTTCAGTAAAGCACAAATTCCTT TTACTGGAGTAACATTATCTGCCGAGGATATAGACAATGTTGTTCTCGAAGGGATAACGG TACAAGTAGGCTTGGCATTAAGAGATTGATGAGATGTGAGTGTATCCATTCGATACCCTT GAGGTATGAAGGTATTAAATCCAGTAATAAGATCGGGATGACCCTCGAACAATTCACGTA CCCGACGAATAACAACCTCCGTCCCAATGGTTTGTGCCTTGAAATCACGCATAACATCAA GAAAGTCCATATAGATAGCCCCCTGGCC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)