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Schistosoma mansoni
cluster # 8805 cluster # 8805       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8805#0 length = 1103 sequences # 3  
consensus_8805#1 length = 775 sequences # 3  
consensus_8805#2 length = 751 sequences # 1  

consensusID : consensus_8805#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1103
fasta sequence
                              [AGTATTTTATTGAACAAAATAAGGTACAAAGTCTTTAAAATCAATATCTCAAAGGTGTCAACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATAAAGTGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGAT-TTGCGGTTATATTACG-TTTCGAATGTGTGAGGA-ACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTAAAGAAAATATCTCTGAGCCAATGGCCCCCAATGGGTTTTTGCTTCCCCCCGCCAAATTTTGGCCCAAGGGCAATTCCCATAGAGAGAGCAATTAAATCCAATCTGGCAAATCGTTCCCGGTGAAATGGTATCCCTCCCAATTCCACAAAATAAACCCGAAATTAAAGGGAAACCCGGGGGGCCAAGGGGGGGCATCCCCTTTATTGGGTTGGCCCCGGCCCTTTTCAAGGGAAAAAATTGGGGCCTTGTTTAAAGAAACCCCCCACCCCGGAAAAGGGGTTTCCAATTGGGCCCTTCCCCTTCCCCCCAAAAAAACCGGGGCCGGGGTTGGGGTGGGGGGGGGGTTCTCTCTCCAGGGGGGAAATGGTTTCCCACAAACGGGGAAACCCGGAAAAAAATTGTGGGAAAAGGGCCCAAAGGCGCGACACCCAAAAAGGGCGCTGTGGGGTTTTTTTAAAAGACC]

[+] EMBL CD074800             [AGTATTTTATTGAACAAAATAAGGTACAAAGTCTTTAAAATCAATATCTCAAAGGTGTCAACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATAAAGTGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGAT TTGCGGTTATATTACG TTTCGAATGTGTGAGGA ACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD074931             [AGTATTTTATTGAACAAAATAAGGTACAAAGTCTTTAAAATCAATATCTCAAAGGTGTCAACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATAAAGTGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGAT TTGCGGTTATATTACG TTTCGAATGTGTGAGGA ACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD074999             [ GTATTTTATTTAACAAAATAAGGAACAAAGTCTTTAAAATCAATATCTCAAAGTCGTCAACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATAAAGTGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATNTTGCGGGTATAATACGTTTTCAAATGTGTGAGGACAC TAA TTTTGGCAAAG TGAACCG CA CAAATTCTGGGAAAAATCCAA CTGAGACCC  CTAACGA AAAAGGTTAAAGAAAATATCTCTGAGCCAATGGCCCCCAATGGGTTTTTGCTTCCCCCCGCCAAATTTTGGCCCAAGGGCAATTCCCATAGAGAGAGCAATTAAATCCAATCTGGCAAATCGTTCCCGGTGAAATGGTATCCCTCCCAATTCCACAAAATAAACCCGAAATTAAAGGGAAACCCGGGGGGCCAAGGGGGGGCATCCCCTTTATTGGGTTGGCCCCGGCCCTTTTCAAGGGAAAAAATTGGGGCCTTGTTTAAAGAAACCCCCCACCCCGGAAAAGGGGTTTCCAATTGGGCCCTTCCCCTTCCCCCCAAAAAAACCGGGGCCGGGGTTGGGGTGGGGGGGGGGTTCTCTCTCCAGGGGGGAAATGGTTTCCCACAAACGGGGAAACCCGGAAAAAAATTGTGGGAAAAGGGCCCAAAGGCGCGACACCCAAAAAGGGCGCTGTGGGGTTTTTTTAAAAGACC]


>consensus_8805#0 AGTATTTTATTGAACAAAATAAGGTACAAAGTCTTTAAAATCAATATCTCAAAGGTGTCA ACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATAAAG TGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTG TTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACT TTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGT TGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTT ACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGT TGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGG CACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATATT ACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGG AAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTAAAGAAAATATCTCTGAGCCA ATGGCCCCCAATGGGTTTTTGCTTCCCCCCGCCAAATTTTGGCCCAAGGGCAATTCCCAT AGAGAGAGCAATTAAATCCAATCTGGCAAATCGTTCCCGGTGAAATGGTATCCCTCCCAA TTCCACAAAATAAACCCGAAATTAAAGGGAAACCCGGGGGGCCAAGGGGGGGCATCCCCT TTATTGGGTTGGCCCCGGCCCTTTTCAAGGGAAAAAATTGGGGCCTTGTTTAAAGAAACC CCCCACCCCGGAAAAGGGGTTTCCAATTGGGCCCTTCCCCTTCCCCCCAAAAAAACCGGG GCCGGGGTTGGGGTGGGGGGGGGGTTCTCTCTCCAGGGGGGAAATGGTTTCCCACAAACG GGGAAACCCGGAAAAAAATTGTGGGAAAAGGGCCCAAAGGCGCGACACCCAAAAAGGGCG CTGTGGGGTTTTTTTAAAAGACC



consensusID : consensus_8805#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 775
fasta sequence
                              [GTA-TTTATTGANCAAATAAAGGTACANAGTCTTTANAATCAATATCTCAAAGGTGTCAACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATANAGTGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATATTACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTTAAGAGAGAGTTATCTCTGACCAATTGTTCCTCAGATTGCTTTTTGGCTTCGCGAAATTTTTTTTGCGATTTGATTCAAAGTAAAGTCATCTTCGTGTCCCAAACGATCATGCTCCTCGTGCCAAATTNTTGGCCTGG]

[-] EMBL CD081108             [GTA TTTATTGANCAAATAAAGGTACANAGTCTTTANAATCAATATCTCAAAGGTGTCAACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATANAGTGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATATTACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTTAAGAGAGAGTTATCTCTGACCAATTGTTCCTCAGATTGCTTTTTGGCTTCGCGAAATTTTTTTTGCGATTTGATTCAAAGTAAAGTCATCTTCGTGTCCCAAACGATCATGCTCCTCGTGCCAAATTNTTGGCCTGG]
[-] EMBL CD081177             [GTATTTTATTGAACAAAATAAGGTACAAAGTCTTTAAAATCAATATCTCAAAGGTGTCAACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATAAAGTGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATATTACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAAGAAGTTCAACCTGAGACCCAG TCTCGACAAGCGGTTTAAGAGAGAGTTATCTGTGACCAATTGTTCCTCAGATTGCTTTTggn                                                                                           ]
[+] EMBL CD137723             [                                                                                                                                            CCATTGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATATTACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCAT                                                                                                                                                                                           ]


>consensus_8805#1 GTATTTATTGANCAAATAAAGGTACANAGTCTTTANAATCAATATCTCAAAGGTGTCAAC GTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATANAGTG TTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTGTT TCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTT CATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTG AAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTTAC TCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTG ATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAGCTGGCA CATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATATTAC GTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAA GAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTTAAGAGAGAGTTATCTCTGACCA ATTGTTCCTCAGATTGCTTTTTGGCTTCGCGAAATTTTTTTTGCGATTTGATTCAAAGTA AAGTCATCTTCGTGTCCCAAACGATCATGCTCCTCGTGCCAAATTNTTGGCCTGG



consensusID : consensus_8805#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 751
fasta sequence
                              [GTATTTATGANNCAAAATAAGGTACANAGTCTTTANAATCAATATCTCAAAGGTGTCACGTGNNAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTANAATAAAGTGTTCGGTTNNNNNNNNNNNNNNNNNGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCANNNNNNNNNNNNNNNNGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATATTACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTTAAGAGAGAGTTATCTCTGACCAATTGTTCCTCAGATTGCTTTTTGGCTTCGCGAAATTTTTTTTGCGATTTGATTCAAAGTAAAGTCATCTTCGTGTCCCAAACGATCAATCTCCTCGTGCCGAATTNTTGGCTCGAGG]

[-] EMBL CD080974             [GTATTTATGANNCAAAATAAGGTACANAGTCTTTANAATCAATATCTCAAAGGTGTCACGTGNNAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTANAATAAAGTGTTCGGTTNNNNNNNNNNNNNNNNNGATCTCACACATAGCATGAATGGAATGAGATCTGTTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTGAAAAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCANNNNNNNNNNNNNNNNGCTGGCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATATTACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTTAAGAGAGAGTTATCTCTGACCAATTGTTCCTCAGATTGCTTTTTGGCTTCGCGAAATTTTTTTTGCGATTTGATTCAAAGTAAAGTCATCTTCGTGTCCCAAACGATCAATCTCCTCGTGCCGAATTNTTGGCTCGAGG]


>consensus_8805#2 GTATTTATGANNCAAAATAAGGTACANAGTCTTTANAATCAATATCTCAAAGGTGTCACG TGNNAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTANAATAAAGTG TTCGGTTNNNNNNNNNNNNNNNNNGATCTCACACATAGCATGAATGGAATGAGATCTGTT TCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACTTT CATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGTTG AAAAGTCTCCACACTTGTTAATTAGTTTTTTACTCTTACAAGGACGATAGATAACCGAAT CCATCGACATCCTTGGAGTCTTTTTTAACGTTGATGTAGTTGACTTTTTGATATTATCAG CTTTCGATGCANNNNNNNNNNNNNNNNGCTGGCACATGTGAATTTCTATTACGAATGAGA GACATAGGATTCAAAGGATTTGCGGTTATATTACGTTTCGAATGTGTGAGGAACATAACT TTTGCCATAGTTGAGTCGTCATCAGTTTCTGGAAGAAGTTCAACCTGAGACCCAGTTAGC GACAAGCGGTTTAAGAGAGAGTTATCTCTGACCAATTGTTCCTCAGATTGCTTTTTGGCT TCGCGAAATTTTTTTTGCGATTTGATTCAAAGTAAAGTCATCTTCGTGTCCCAAACGATC AATCTCCTCGTGCCGAATTNTTGGCTCGAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8805#1      -GTATTT-ATTGANCAAATAAAGGTACANAGTCTTTANAATCAATATCTCAAAGGTGTCA 58
consensus_8805#2      -GTATTT-ATGANNCAAAATAAGGTACANAGTCTTTANAATCAATATCTCAAAGGTGTCA 58
consensus_8805#0      AGTATTTTATTGAACAAAATAAGGTACAAAGTCTTTAAAATCAATATCTCAAAGGTGTCA 60
                       ****** **    ****  ******** ******** **********************

consensus_8805#1      ACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATANAG 118
consensus_8805#2      CGTGNNAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTANAATAAAG 118
consensus_8805#0      ACGTGGAGAGCGTGAATACCTTCCAAACGTACTCGCTCCTTCCGCAAATTTAAAATAAAG 120
                            ********************************************** **** **

consensus_8805#1      TGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTG 178
consensus_8805#2      TGTTCGGTTNNNNNNNNNNNNNNNNNGATCTCACACATAGCATGAATGGAATGAGATCTG 178
consensus_8805#0      TGTTCGGTTCATAACTCCAACCCATTGATCTCACACATAGCATGAATGGAATGAGATCTG 180
                      *********                 **********************************

consensus_8805#1      TTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACT 238
consensus_8805#2      TTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACT 238
consensus_8805#0      TTTCACTTGACCAAACGTGCAAGGTTAAACGTCAATATTGCTATGTGAGTCATCACTACT 240
                      ************************************************************

consensus_8805#1      TTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGT 298
consensus_8805#2      TTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGT 298
consensus_8805#0      TTCATAGGTCACAAGTTCGACAGAACTATCTGTCACGTGATTACAAAATAGATTGGGAGT 300
                      ************************************************************

consensus_8805#1      TGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTT 358
consensus_8805#2      TGAAA---------------------------AGTCTCCACACTTGTTAATTAGTTTTTT 331
consensus_8805#0      TGAAAGAGTGAATTCATTTTCTTCAATTCCAGAGTCTCCACACTTGTTAATTAGTTTTTT 360
                      *****                           ****************************

consensus_8805#1      ACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGT 418
consensus_8805#2      ACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGT 391
consensus_8805#0      ACTCTTACAAGGACGATAGATAACCGAATCCATCGACATCCTTGGAGTCTTTTTTAACGT 420
                      ************************************************************

consensus_8805#1      TGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAG-CTG 477
consensus_8805#2      TGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCANNNNNNNNNNNNNNNNGCTG 451
consensus_8805#0      TGATGTAGTTGACTTTTTGATATTATCAGCTTTCGATGCACTTTTGGTCTTAGAAG-CTG 479
                      ****************************************                 ***

consensus_8805#1      GCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATAT 537
consensus_8805#2      GCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATAT 511
consensus_8805#0      GCACATGTGAATTTCTATTACGAATGAGAGACATAGGATTCAAAGGATTTGCGGTTATAT 539
                      ************************************************************

consensus_8805#1      TACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTG 597
consensus_8805#2      TACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTG 571
consensus_8805#0      TACGTTTCGAATGTGTGAGGAACATAACTTTTGCCATAGTTGAGTCGTCATCAGTTTCTG 599
                      ************************************************************

consensus_8805#1      GAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTTAAGAGAGAGTTATCTCTGA 657
consensus_8805#2      GAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTTAAGAGAGAGTTATCTCTGA 631
consensus_8805#0      GAAGAAGTTCAACCTGAGACCCAGTTAGCGACAAGCGGTTAAAGAAAA---TATCTCTGA 656
                      **************************************** **** *    *********

consensus_8805#1      CCAATTGTTCCTCA---GATTGCTTTTTGGCTTCGCGAAATTTTTTTTGCGATTTGATTC 714
consensus_8805#2      CCAATTGTTCCTCA---GATTGCTTTTTGGCTTCGCGAAATTTTTTTTGCGATTTGATTC 688
consensus_8805#0      GCCAATGGCCCCCAATGGGTTTTTGCTTCCCCCCGCCAAATTTTGGCCCAAGGGCAATTC 716
                       * * **  ** **   * **  *  **  *  *** *******            ****

consensus_8805#1      AAAGTAAAGTCATCTTCGTGTCCCAAACGATCATGCTCCTCGTGCCAAATTNTTGGCCTG 774
consensus_8805#2      AAAGTAAAGTCATCTTCGTGTCCCAAACGATCAATCTCCTCGTGCCGAATTNTTGGCTCG 748
consensus_8805#0      CCA-TAGAGAGAGCAATTAAATCCAATCTGGCAAATCGTTCCCGGTGAAATGGTATCCCT 775
                        * ** **  * *        **** *   **      **  *   ** *  *  *   

consensus_8805#1      G----------------------------------------------------------- 775
consensus_8805#2      AGG--------------------------------------------------------- 751
consensus_8805#0      CCCAATTCCACAAAATAAACCCGAAATTAAAGGGAAACCCGGGGGGCCAAGGGGGGGCAT 835
                                                                                  

consensus_8805#1      ------------------------------------------------------------
consensus_8805#2      ------------------------------------------------------------
consensus_8805#0      CCCCTTTATTGGGTTGGCCCCGGCCCTTTTCAAGGGAAAAAATTGGGGCCTTGTTTAAAG 895
                                                                                  

consensus_8805#1      ------------------------------------------------------------
consensus_8805#2      ------------------------------------------------------------
consensus_8805#0      AAACCCCCCACCCCGGAAAAGGGGTTTCCAATTGGGCCCTTCCCCTTCCCCCCAAAAAAA 955
                                                                                  

consensus_8805#1      ------------------------------------------------------------
consensus_8805#2      ------------------------------------------------------------
consensus_8805#0      CCGGGGCCGGGGTTGGGGTGGGGGGGGGGTTCTCTCTCCAGGGGGGAAATGGTTTCCCAC 1015
                                                                                  

consensus_8805#1      ------------------------------------------------------------
consensus_8805#2      ------------------------------------------------------------
consensus_8805#0      AAACGGGGAAACCCGGAAAAAAATTGTGGGAAAAGGGCCCAAAGGCGCGACACCCAAAAA 1075
                                                                                  

consensus_8805#1      ----------------------------
consensus_8805#2      ----------------------------
consensus_8805#0      GGGCGCTGTGGGGTTTTTTTAAAAGACC 1103
                                                  




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)