cluster # 8855

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Schistosoma mansoni
cluster # 8855 cluster # 8855 Sequences # 7 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8855#0 length = 456 sequences # 7

consensusID : consensus_8855#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 456
fasta sequence

                              [CACCAGCAG-CA-ACG-GCA-ACAACAACG-G-GT-AACACTGGTGCTTCT-GCATCAACCT-CATCAAAAGACATCGCCATTCGTCT-GATGAAAAACGA-AGCACTTTACGG-TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG-ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA-GGTGGAATCGCATCGAATTCAGCTTATT]

[-] EMBL CD087856             [CACCACCAG C  ACC GCC ACCACCACG G GTCACCAC GGTGGTTTTCGCATC ACCTGCTTCAAAGGACTTCTCCATTCTTCTATATGAAAACCGAGAGCACTTTACGGTTGTAATGGAATTCGTTAGTGGAATTGTCATGAATGTCAAAGAGGGAAATAGTATTTCTCTTGAACGTGAAACCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGTGGCATCG                  ]
[-] EMBL CD087798             [   CAGCAG CA ACG GCA ACAACAACG G GT AACACTGGTGCTTCT GCATCAACCT CATCAAAAGACATCGCCATTCGTCT GATGAAAAACGA AGCACTGTACGG TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAATGGTGGca                     ]
[+] EMBL CD087924             [   CAGCAG CA ACG GCA ACAACAACG G GT AACACTGGTGCTTCT GCATCAACCT CATCAAAAGACATCGCCATTCGTCT GATGAAAAACGA AGCACTTTACGG TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAACGCANATTCATCATCAAATACGAATCACAcg                                                                                                                                                                                                                  ]
[+] EMBL CD087799             [     GCAGCCATACGTGCATACAACGACGCGCGT AACAGAGGTGCTTCT GCATCAACCT CATCAAAAGACATCGCCATTCGTCT GATGAAAAACGA AGCACTTTACGG TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGTGGAATCGCATCGAATTCAGCTTAT ]
[+] EMBL CD087812             [                  at ACAACAACG G GT  ACACTGGTGCTTCT GCATCAACCT CATCAAAAGACATCGCCATTCGTCT GATGAAAAACGA AGCACTTTACGG TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGTGGAATCGCATCGAATTCAGCTTAT ]
[-] EMBL CD087987             [                                                                                                                                                                                                     ACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGCGCAAgagcc                ]
[-] EMBL CD087899             [                                                                                                                                                                                                                                                                                                                                                           ATCGAAAAGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGTGGAATCGCATCGAATTCAGCTTATT]




>consensus_8855#0
CACCAGCAGCAACGGCAACAACAACGGGTAACACTGGTGCTTCTGCATCAACCTCATCAA
AAGACATCGCCATTCGTCTGATGAAAAACGAAGCACTTTACGGTGTAATGGAATTCGCTA
GTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATC
CGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACGA
TCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAG
AACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATT
TGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAA
TGAAAAAAGGTGGAATCGCATCGAATTCAGCTTATT

clustalw multiple alignements is not computed in this case