cluster # 8876

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Schistosoma mansoni
cluster # 8876 cluster # 8876 Sequences # 7 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8876#0 length = 405 sequences # 7

consensusID : consensus_8876#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 405
fasta sequence

                              [ATTTGGTCGGTTTTTTCTGCTTTTCCTCATACAAGTGGGTTGGTCCTCTGGACATTTGCTATCCTAAAATAATGGCCGACCTACCAATTTATGTGTTTACCGGACCTTCTGGGGCTGGTAAAAGCACGTTACTACAAATGTTGCTGGAGAAGTTTCCCAATAGTTTTGGCTTCAGTGTATCACATACAACTCGAAAACCACGCCCAGGG-GAAGAGATGGAGTAGATTATCACTTTACC-GACAGAGATACGTTTTTGAATGAGGTTT-CTCAGAGGAAATTTCTTGAGTATGCAGAATTTGCTGGGAATTTTTATGGAACATCAAGATTAGCTGGAGAAACCAGTCTTAAGGGGGGGCCGAAAAGGATTTAAGTGTTGACCACGGGGGTTTAAAGTCCAGGCATTCA]

[+] EMBL CD161222             [ATTTGGTCGGTTTTTTCTGCTTTTCCTCATACAAGTGGGTTGGTCCTCTGGACATTTGCTATCCTAAAATAATGGCCGACCTACCAATTTATGTGTTTACCGGACCTTCTGGGGCTGGTAAAAGCACGTTACTACAAATGTTGCTGGAGAAGTTTCCCAATAGTTTTGGCTTCAGT                                                                                                                                                                                                                                        ]
[+] EMBL CD161026             [ATTTGGTCGGTTTTTTCTGCTTTTCCTCATACAAGTGGGTTGGTCCTCTGGACATTTGCTATCCTAAAATAATGGCCGACCTACCAATTTATGTGTTTACCGGACCTTCTGGGGCTGGTAAAAGCACGTTACTACAAATGTTGCTGGAGAAGTTTCCCAATAGTTTTGGCTTCAGT                                                                                                                                                                                                                                        ]
[-] EMBL CD161051             [ TTTGGTCGGTTTTTTCTGCTTTTCCCCATACAAGTGGGTTGGTCCTCTGGACATTTGCTATCCTAAAATAATGGCCGACCTACCAATTTATGTGTTTACCGGACCTTCTGGGGCTGGTAAAAGCACGTTACTACAAATGTTGCTGGAGAAGTTTCCCAATAGTTTTGGCTTCAGTG                                                                                                                                                                                                                                       ]
[+] EMBL CD139109             [                                              TCTGGACATTTGCTATCCTCAAATAATGGCCGACCTACCAATTTATGTGTTTACCGGACCTTCTGGGGCTGGTAAAAGCACGTTACTACAAATGTTGCTGGAGAAGTTTCCCAATAGTTTTGGCTTCAGTGTATCACATACAACTCGAAAACCACGCCCAGGG GAAGAGATGGAGTAGATTATCACTTTACC GACAGAGATACGTTTTTGAATGAGGTTT CTCAGAGGAAATTTCTTGAGTATGCAGAATTTGCTGGGAATTTTTATGGAACATCAAGATTAGCT                                                                          ]
[-] EMBL CD122926             [                                                    CATTTGCTATCCTCAAATAATGGCCGACCTACCAATTTATGTGTTTACCGGACCTTCTGGGGCTGGTAAAAGCACGTTACTACAAATGTTGCTGGAGAAGTTTCCCAATAGTTTTGGCTTCAGTG                                                                                                                                                                                                                                       ]
[-] EMBL CD122781             [                                                    CATCTGCTATCCTCAAATAATGGCCGACCTACCAATTTATGTGTTTACCGGACCTTCTGGGGCTGGTAAAAGCACGTTACTACAAATGTTGCTGGAGAAGTCTCCCAATAGTTTTGGCTTCAGTG                                                                                                                                                                                                                                       ]
[+] EMBL AW497737             [                                                                                                   CCGGACCTTCTGGGGCTGGTAAAAGCACGTTACTACAAATGTTGCTGGAGAAGTTTCCCAATAGTTTTGGCTTCAGTGTATCTCATACAACTCGAAAACCACGCCCAGGGAAAAGAGATGGAGTAGATTACCACTTTACCGGACAGAGATACGTTTTTGAATGAGGTTTCCTCA AAGAAATTCCTTGATTATGCCAAATTTCCTGGGAACTTTTATGGAACATCAAGATTA CTGGAGAAACCAGTCTTAAGGGGGGGCCGAAAAGGATTTAAGTGTTGACCACGGGGGTTTAAAGTCCAGGCATTCA]




>consensus_8876#0
ATTTGGTCGGTTTTTTCTGCTTTTCCTCATACAAGTGGGTTGGTCCTCTGGACATTTGCT
ATCCTAAAATAATGGCCGACCTACCAATTTATGTGTTTACCGGACCTTCTGGGGCTGGTA
AAAGCACGTTACTACAAATGTTGCTGGAGAAGTTTCCCAATAGTTTTGGCTTCAGTGTAT
CACATACAACTCGAAAACCACGCCCAGGGGAAGAGATGGAGTAGATTATCACTTTACCGA
CAGAGATACGTTTTTGAATGAGGTTTCTCAGAGGAAATTTCTTGAGTATGCAGAATTTGC
TGGGAATTTTTATGGAACATCAAGATTAGCTGGAGAAACCAGTCTTAAGGGGGGGCCGAA
AAGGATTTAAGTGTTGACCACGGGGGTTTAAAGTCCAGGCATTCA

clustalw multiple alignements is not computed in this case