These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8908#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 368 fasta sequence [GGCTGCGTGTGCATTACAAGACGTATGCTGGCAGAAGTAGCCGTGATATCAGGTTTGATCAGCTGCTGCACACAAAACCGTTATCTGGCTCTTCATCCACAGCATTCTCTAAATCAAGTGTTAGTTCCAGGAAAAGGGTTAACGTCGTTTCCTTTGTACCCACTGGTGAGGGGCAAGAATTGGTGACCAAATCTCCTGACAAAATCGTGTCAGAAAATTCAGATAGCTCTACTTGTGCAGGTGCAGTGCAGGCAAATATATCTCAGTCATTTTTGACCCATTCCTCTACTGAAGATGTTACCACCGGTTCACCCATCCCGTCATACTCTAGTGCACATAAAGAATGTCCCAGTCGTCCACCAAATATT] [-] EMBL CD072686 [GGCTGCGTGTGCATTACAAGACGTATGCTGGCAGAAGTAGCCGTGATATCAGGTTTGATCAGCTGCTGCACACAAAACCGTTATCTGGCTCTTCATCCACAGCATTCTCTAAATCAAGTGTTAGTTCCAGGAAAAGGGTTAACGTCGTTTCCTTTGTACCCACTGGTGAGGGGCAAGAATTGGTGACCAAATCTCCTGACAAAATCGTGTCAGAAAATTCAGATAGCTCTACTTGTGCAGGTGCAGTGCAGGCAAATATATCTCAGT ] [+] EMBL CD125566 [ CGTTATCTGGCTCTTCATCCACAGCATTCTCTAAATCAAGTGTTAGTTCCAGGAAAAGGGTTAACGTCGTTTCCTTTGTACCCACTGGTGAGGGGCAAAATTTGGCGACCAAATCTCCTGACAAAATCGTGTCAGAAAATTCAGATAGCTCTACTTGTGCAGGTGCAGTGCAGGCAAATATATCTCAGTCATTTTTGACCCATTCCTCTTCTGAAGATGTTACCACCGGTTCACCCATCCCGTCATACTCTAGTGCACATAAAGAATGTCCCAGTCGTCCACCAAATATT] [+] EMBL CD125456 [ CGTTATCTGGCTCTTCATCCACAGCATTCTCTAAATCAAGTGTTAGTTCCAGGAAAAGGGTTAACGTCGTTTCCTTTGTACCCACTGGTGAGGGGCGAGAATTGGTGACCAAATCTCCTGACAAAATCGTGTCAGAAAATTCAGATAGCTCTACTTGTGCAGGTGCAGTGCAGGCAAATATATCTCAGTCATTTTTGACCCATTCCTCTACTGAAGATGTTACCACCGGTTCACCCATCCCGTCATACTCTAGTGCACATAAAGAATGTCCCAGTCGTCCACCAAATATT] [+] EMBL CD125457 [ CGTTATCTGGCTCTTCATCCACAGCATTCTCTAGATCAAGTGTTAGTTCCAGGAAAAGGGTTAACGTCGTTTCCTTTGTACCCACTGGTGAGGGGCAAGAATTGGTGACCAAATCTCCTGACAAAATCGTGTCAGAAAATTCAGATAGCTCTACTTGTGCAGGTGCAGTGCAGGCAAATATATCTCAGTCATTTTTGACCCATTCCTCTACTGTAGATGTTACCACCGGTTCACCCATCCCGTCATACTCTAGTGCACATAAAGAATGTCCCAGTCGTCCACCAAATATT] [+] EMBL CD125539 [ CGTTATCTGGCTCTTCATCCACAGCATTCTCTAAATCAAGTGTTAGTTCCAGGAAAAGGGTTAACGTCGTTTCCTTTGTACCCACTGGTGAGGGGCAAGAATTGGTGACCAAATCTCCTGACAAAATCGTGTCAGAAAATTCAGATAGCTCTACTTGTGCAGGTGCAGTGCAGGCAAATATATCTCAGTCATTTTTGACCCATTCCTCTACTGAAGATGTTACCACCGGTTCACCCATCCCGTCATACTCTAGTGCACACAAAGAATGTCCCAGTCGTCCACCAAACATT] [+] EMBL CD125544 [ CGTTATCTGGCTCTTCATCCACAGCATTCTCTAAATCAAGTGTTAGTTCCAGGAAAAGGGTTAACGTCGTTTCCTTTGTACCCACTGGTGAGGGGCAAGAATTGGTGACCAAATCTCCTGACAAAATCGTGTCAGAAAATTCAGATAGCTCTACTTGTGCAGGTGCAGTGCAGGCAAATATATCTCAGTCATTTTTGACCCATTCCTCTACTGAAGATGTTACCACCGGTTCACCCATCCCGTCATACTCTAGTGCACATAAAGAATGTCCCAGTCGTCCACCAAATATT] [+] EMBL CD112561 [ TTGGTGACCAAATCTCCTGACAAAATCGTGTCAGAAAATTCAGATAGCTCTACTTGTGCAGGTGCAGTGCAGGCAAATATATCTCAGTCATTTTTGACCCATTCCTCTACTGAAGATGTTACCACCGGTTCACCCATCCCGTCATACTCTAGTGCACA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||