These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8914#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 796 fasta sequence [CTCCGAGCCAATATTCGGCACAATTGAGGCGCCTATTCTGGTCCTAATGAGCCGTACTGATTTGGGGTTATGGGCCCTGTTCTAACGCTACAGCATAGCTATTCAAACCAAAAGGTTGGGGTTTGTCTCGAGACTCCTCAGCTCTCGTCGGAGTTTGTTGATTTACATCATTTACCAGCTGAGCTTGCTCTCAATATATTGTCGAGGCTCAATGCCACTGATCTGTACCTAGCATCTTGTGTTTGGTATGATCTTGCTTACGACGAGGTTTTGTGGAAAAGTTTGTGCAAAGCTTCTTGGCCATTTTGTTCGGCGTACACGAATGGCGTACTTCAATCTGAGCCGTCATTTCGTCGACTATATCTTAGGCTAGACGAAGCGCGTTTGACATTTAACGCAGACGCCTTCGAAGGTATGGGCTACATCTTCAGACATCGTCTTGTTGACGATAATACCGATGATCTTGTTAACTTTTTCCACCATGCTTCCGGATTAGATCCATTCCAGAAGCGTCGATATCTGGAAACGAGACCCCAGGTTCTACGCGGACTAGTGAATTTAAAAGATTTCCGGCACTGTTCATTACCAAATGCGTTAAGAGGACTTTTCACTGAACTGCCAGTCCCATCAACAGAACCTAGCGCGTCAGCTTTCATCCATCTGTTGGTCAGTCTGTTTTCCG-AAGA-TTACTC-ATGCCA-CCAGATCTT-GGAT-ACACGT-GNATGTGTTGGAGTTTGCC--TTATATATT-AGATT-AAAC-TTAC-TAGTTTG-TTA-TAATCG-GGAAAATCG-GAAT-TTCTGTTTT] [+] EMBL CD080787 [CTCCGAGCCAATATTCGGCACGAGGCAGGCGCCTATTCTGGTCCTAATGAGCCGTACTGATTTGGGGTTATGGGCCCTGTTCTAACGCTACAGCATAGCTATTCAAACCAAAAGGTTGGGGTTTGTCTCGAGACTCCTCAGCTCTCGTCGGAGTTTGTTGATTTACATCATTTACCAGCTGAGCTTGCTCTCAATATATTGTCGAGGCTCAATGCCACTGATCTGTACCTAGCATCTTGTGTTTGGTATGATCTTGCTTACGACGAGGTTTTGTGGAAAAGTTTGTGCAAAGCTTCTTGGCCATTTTGTTCGGCGTACACGAATGGCGTACTTCAATCTGAGCCGTCATTTCGTCGACTATATCTTAGGCTAGACGAAGCGCGTTTGACATTTAACGCAGACGCCTTCGAAGGTATGGGCTACATCTTCAGACATCGTCTTGTTGACGATAATACCGATGATCTTGTTAACTTTTTCCACCATGCTTCCGGATTAGATCCATTCCAGAAGCGTCGATATCTGGAAACGAGACCCCAGGTTCTACGCGGACTAGTGAATTTAAAAGATTTCCGGCACTGTTCATTACCAAATGCGTTAAGAGGACTTTTCACTGAACTGCCAGTCCCATCAACAGAACCTAGCGCGTCAGCTTTCATCCATCTGTTGGTCAGTCTGTTTTCCG AAGA TTACTC ATGCCA CCAGATCTT GGAT ACACGT GNATGTGTTGGAGTTTGCC TTATATATT AGATT AAAC TTAC TAGTTTG TTA TAATCG GGAAAATCG GAAT TTCTGT ] [-] EMBL CD148729 [ AATTGAGGCGCCTATTCTGGTCCTAATGAGCCGTACTGATTTGGGGTTATGGGCCCTGTTCTAACGCTACAGCATAGCTATTCAAACCAAAAGGTTGGGGTTTGTCTCGAGACTCCTCAGCTCTCGTCGGAGTTTGTTGATTTACATCATTTACCAGCTGAGCTTGCTCTCAATATATTGTCGAGGCTCAATGCCAC ] [-] EMBL CD148735 [ AATTGAGGCGCCTATTCTGGTCCTAATGAGCCGTACTGATTTGGGGTTATGGGCCCTGTTCTAACGCTACAGCATAGCTATTCAAACCAAAAGGTTGGGGTTTGTCTCGAGACTCCTCAGCTCTCGTCGGAGTTTGTTGATTTACATCATTTACCAGCTGAGCTTGCTCTCAATATATTGTCGAGGCTCAATGCCAC ] [-] EMBL CD148711 [ AATTGAGGCGCCTATTCTGGTCCTAATGAGCCGTACTGATTTGGGGTTATGGGCCCTGTTCTAACGCTACAGCATAGCTATTCAAACCAAAAGGTTGGGGTTTGTCTCGAGACTCCTCAGCTCTCGTCGGAGTTTGTTGATTTACATCATTTACCAGCTGAGCTTGCTCTCAATATATTGTCGAGGCTCAATGCCAC ] [+] EMBL AI975713 [ CGTACTGATTTGGGGTTATGGGCCCTGTTCTAACGCTACAGCATAGCTATTCAAACCAAAAGGTTGGGGTTTGTCTCGAGACTCCTCAGCTCTCGTCGGAGTTTGTTGATTTACATCATTTACCAGCTGAGCTTGCTCTCAATATATTGTCGAGGCTCAATGCCACTGATCTGTACCTAGCATCTTGTGTTTGGTATGATCTTGCTTACGACGAGGTTTTGTGGAAAAGTTTGTGCAAAGCTTCTTGGCCATTTTGTTCGGCGTACACGAATGGCGTACTTCAATCTGAGCCGTCATTTCGTCGACTATATCTTAGGCTAGACGAAGCGCGTTTGACATTTAACGCAGACGCCTTCGAAGGTATGGGCTACATCTTCAGACATCGTCTTGTTGACGATAATACCGATGATCTTGTTAACTATT ] [+] EMBL BF936302 [ CGTACTGATTTGGGGTTATGGGCCCTGTTCTAACGCTACAGCATAGCTATTCAAACCAAAAGGTTGGGGTTTGTCTCGAGACTCCTCAGCTCTCGTCGGAGTTTGTTGATTTACATCATTTACCAGCTGAGCTTGCTCTCAATATATTGTCGAGGCTCAATGCCACTGATCTGTACCTAGCATCTTGTGTTTGGTATGATCTTGCTTACGACGAGGTTTTGTGGAAAAGTTTGTGCAAAGCTTCTTGGCCATTTTGTTCGGCGTACACGAATGGCGTACTTCAATCTGAGCCGTCATTTCGTCGACTA ] [-] EMBL CD074708 [ TGTTCGGCGTACACGAATGGCGTACTTCAATCTGAGCCGTCATTTCGTCGACTATATCTTAGGCTAGACGAAGCGCGTTTGACATTTAACGCAGACGCCTTCGAAGGTATGGGCTACATCTTCAGACATCGTCTTGTTGACGATAATACCGATGATCTTGTTAACTTTTTCCACCATGCTTCCGGATTAGATCCATTCCAGAAGCGTCGATATCTGGAAACGAGACCCCAGGTTCTACGCGGACTAGTGAATTTAAAAGATTTCCGGCACTGTTCATTACCAAATGCGTTAAGAGGACTTTTCACTGAACTGCCAGTCCCATCAACAGAACCTAGCGCGTCAGCTTTCATCCATCTGTTGGTCAGTCTGTTTTCCGAAAGATTTACTCAATGCAACCCAGATCTTGGGATCACACGTGGTATGTGTTGGAGTTTGCCGTTTATATATTAAGATTAAAACATTACGTAGTTTGTTTATTATTCGTGAAAAATCGTGAATATCCTGTTTT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||