These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8929#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1425 fasta sequence [CCGAGGCCANAATAGGGCACGAGGCGTCCTCTCCCTCCTGAACTGGATGCGACCTGTTTAGAAACGTATTTAGATGAAAAAACTTTCGAAGAAACATTTTCAATGTCTAGAGAAGATTTCAATAAATTACCAATTTGGAAACAGACAGAAATGAAAAAGTATTTAGGTTTATTCTAATGGAATTCTCGACTTGTTTAAATTATTCAAATATATATATGTGTATGCACATATATAAGTCAATACACAATCCCACATAAAGATATACACATATCATTTCAACATTCAAAGTATTATATTGCATTGTATCATATACACATGAAGATGAAGAAATTCTTTGAGTTACAAATGATTATTCACATTTTTGTGAATGTATACACCAGATAATACACATAATTGTATTTTCTCAAATAAATACAATACCATCAAACAATCCCGGAAGTGATGACCTTGAATTTATTGAGTAATATCATACCCTCTGGAATGTAAACCAACTTTATTTTGAAAAAAAGATTCATATATATATATATACATAGACATACTTGTCTCATTGACTGATTTCATTTTGCTACTATTTGAAAGGTATAAACTTATTNTATGTAACTATTTTTTATACACAATGGCTACTTGTTAAATAAAAGAGTTATAGGTTGCTTAGTGTTCCTCATACTACTATTACTACTACTAGCACTATTACCACTGTTATGACTAGTTATGTAACAGCATAAAACAATTTCCATTATTCAGTTTGTTTATTTTTCTCTCACTTATCCATTGTCTATATTTATGACTGACTTATACTCCACTTCAATATATCATGCATGTATCAAACACTTTATATGATCTATCATCCATTCTGTGTTAAGGTTAAAAATAGAAGACTTGAATAAATAAATTCTTTATTGCCTTTCAACAGTGATATTCTGTCGTTTTTTTCTTTTAAACAAACAACAATCTATTACTCATACATAGAGACAGATATAAAACATGATATAAATAAAATCAATGGCACAATCATGAGAATTCATTTGCATAACTCTTATATTCATTGTCTTTCATAGTTTATATAGAACAAATATACATAGGTAAACGCATTCAGTTTTAGTTTGTTGGTTTTGTTTATATCATTCTATACCTTTCT-AACAATC-AAGAGATAATGATATTTCAGCTAC-TTTTGTTCCGTATTCTTCTTCTTCTTCTTCTATTGCTTCAATGAATATCAGTTATAAGTCAGTGTATAAGTACATTGAGATGGTTTATAAAAAAATAAAATAAAATAGAAACATCATTATAATCAATCATAATTGTGTCTTTGTCACTATTCTTACCATTGTATCGATTATTATTATTATTACTGTTCTCATTATTAATGTTTATCTGTTACTAATTGGTTTCAGATCATTAAATAAACTGAATTATTTTCATCAT] [+] EMBL CD081347 [CCGAGGCCANAATAGGGCACGAGGCGTCCTCTCCCTCCTGAACTGGATGCGACCTGTTTAGAAACGTATTTAGATGAAAAAACTTTCGAAGAAACATTTTCAATGTCTAGAGAAGATTTCAATAAATTACCAATTTGGAAACAGACAGAAATGAAAAAGTATTTAGGTTTATTCTAATGGAATTCTCGACTTGTTTAAATTATTCAAATATATATATGTGTATGCACATATATAAGTCAATACACAATCCCACATAAAGATATACACATATCATTTCAACATTCAAAGTATTATATTGCATTGTATCATATACACATGAAGATGAAGAAATTCTTTGAGTTACAAATGATTATTCACATTTTTGTGAATGTATACACCAGATAATACACATAATTGTATTTTCTCAAATAAATACAATACCATCAAACAATCCCGGAAGTGATGACCTTGAATTTATTGAGTAATATCATACCCTCTGGAATGTAAACCAACTTTATTTTGAAAAAAAGATTCATATATATATATATACATAGACATACTTGTCTCATTGACTGATTTCATTTTGCTACTATTTGAAAGGTATAAACTTATTNTATGTAACTATTTTTTATACACAATGGCTACTTGTTAAATAAAAGAGTTATAGGTTGCTTAGTGTTNCTCATACTACTACTACTACTACTAGCACTATTACCACTGTT ] [-] EMBL CD185820 [ AGAAATGAAAAAGTATTTAGGTTTATTCTAATGGAATTCTCGACTTGTTTAAATTATTCAAATATATATATGTGTATGCACATATATAAGTCAATACACAATCCCACATAAAGATATACACATATCATTTCAACATTCAAAGTATTATATTGCATTGTATCATATACACATGAAGATGAAGAAATTCTTTGAGTTACAAATGATTATTCACATTTTTGTGAATGTATACACCAGATAATACACATAATTGTATTTTCTCAAATAAATACAATACCA ] [-] EMBL CD169556 [ TATATATATATACATAGACATNCTTGTCTCATTGACTGATTTCATTTTGCTACTATTTGAAAGGTATAAACTTATTTTATGTAACTATTTTTTATACACAATGGCTACTTGTTAAATAAAAGAGTTATAGGTTGCTTAGTGTTCCTCATACTACTATTACTACTACTAGCACTATTACCACTGTTATGACTAGTTATGTAACAGCATAAAACAATTTCCATTATTCAGTTTGTTTATTTTTCTCTCACTTATCCATTGTCTATATTTATGACTGACTTATACTCCACTTCAATATATCATGCATGTATCAAACACTTTATATGATCTATCATCCATTCTGTGTTAAGGTTAAAAATAGAAGACTTGAATAAATAAATTCTTTATTGCCTTTCAACAGTGATATTCTGTCGTTTTTTTCTTTTAAACAAACAACAATCTATTACTCATACATAGAGACAGATATAAAACATGATATAAATAAAATCAATGGCACAATCATGAGAATTCATTTGCATAACTCTTATATTCATTGTCTTTCATAGTTTATATAGAACAAATATACATAGGTAAACGCATTCAGTTTTAGTTTGTTGGTTTTGTTTATATCATTCTATACCTTTCT AACAATC AAGAGATAATGATATTTCAGCTAC TTTTGTT ] [-] EMBL CD169797 [ GCTACTTGTTAAATAAAAGAGTTATAGGTTGCTTAGTGTTCCTCATACTACTATTACTACTACTAGCACTATTACCACTGTTATGACTAGTTATGTAACTGCATAAAACAATTTCCATTATTCAGTTTGTTTATTTTTCTCTCACTTATCCATTGTCTATATTTATGACTGACTTATACTCCACTTCAATATATCATGCATGTATCAAACACTTTATATGATCTATCATCCATTCTGTGTTAAGGTTAAAAATAGAAGACTTGAATAAATAAATTCTTTATTGCCTTTCAACAGTGATATTCTGTCGTTTTTTTCTTTTAAACAAACAACAATCTATTACTCATACATAGAGACAGATATAAAACATGATATAAATAAAATCAATGGCACAATCATGAGAATTCATTTGCATAACTCTTATATTCATTGTCTTTCATAGTTTATATAGAACAAATATACATAGGTAAACGCATTCAGTTTTAGTTTGTTGGTTTTGTTTATATCATTCTATACCTTTCT AACAATC AAGAGATAATGATATTTCAGCTAC TTTTGTT ] [-] EMBL CD118585 [ ATTTATGACTGACTTATACTCCACTTCAATATATCATGCATGTATCAAACACTTTATATGATCTATCATCCATTCTGTGTTAAGGTTAAAAATAGAAGACTTGAATAAATAAATTCTTTATTGCCTTTCAACAGTGATATTCTGTCGTTTTTTTCTTTTAAACAAACAACAATCTATTACTCATACATAGAGACAGATATAAAACATGATATAAATAAAATCAATGGCACAATCATGAGAATTCATTTGCATAACTCTTGTATTCATTGTCTTTCATAGTTTATATAGAACAAATATACATAGGTAAACGATTTCAGTTTTAGTTTGTTGGTTTTGTTTATATCATTCTATACCTTTATGAACAGTCAAAGAG TAATGATATTTCAGCTA ] [-] EMBL CD075179 [ GACTTATACTCCACTTCAATATATCATGCATGTATCAAACACTTTATATGATCTATCATCCATTCTGTGTTAAGGTTAAAAATAGAAGACTTGAATAAATAAATTCTTTATTGCCTTTCAACAGTGATATTCTGTCGTTTTTTTCTTTTAAACAAACAACAATCTATTACTCATACATAGAGACAGATATAAAACATGATATAAATAAAATCAATGGCACAATCATGAGAATTCATTTGCATAACTCTTATATTCATTGTCTTTCATAGTTTATATAGAACAAATATACATAGGTAAACGCATTCAGTTTTAGTTTGTTGGTTTTGTTTATATCATTCTATACCTTTCT AACAATC AAGAGATAATGATATTTCAGCTAC TTTTGTTCCGTATTCTTCTTCTTCTTCTTCTATTGCTTCAATGAATATCAGTTATAAGTCAGTGTATAAGTACATTGAGATGGTTTATAAAAAAATAAAATAAAATAGAAACATCATTATAATCAATCATAATTGTGTCTTTGTCACTATTCTTACCATTGTATCGATTATTATTATTATTACTGTTCTCATTATTAATGTTTATCTGTTACTAATTGGTTTCAGATCATTAAATAAACTGAATTATTTTCATCAT] [+] EMBL SMAA98625 [ ATTCATTGTCTTTCATAGTTTATATAGAACAAATATACATAGGTAAACGCATTCAGTTTTAGTTTGTTGGTTTTGTTTATATCATTCTATACCTTTCT AACAATC AAGAGATAATGATATTTCAGCTACTTTTTGTTCCGT ] [+] EMBL AA952862 [ ATTCATTGTCTTTCATAGTTTATATAGAACAAATATACATAGGTAAACGCATTCAG TTTAGTTTGTTGGTTTTGTTTATATCATTCTATACCTTTCT AACAATC AAGAGATAATGATATTTCAGCTACTTTTTGTTCCGT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||