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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8944#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 794 fasta sequence
[AAACTTCATGTTAAGTCACTGCTTTAAATTCTAAAGGATTTGATTAATTTTAACAGCAAAAGCATTTATCAAACTATTTAGGAAATTGTCTGTGATGGTACGCGATAATGTGAATCAATTAATAACAAAGAAACTTGTTTAGTAATAAATATACAACAATTTGCCTCATGGTCTGTTGATAATTTACTCGTCCTTGTATGTTTGTTCGGACTGGCATTTGGTTACTTCTAAAGTAATTTCCTTGTAAATAAGCAGTAAACCTAGGAGGATAGTACATGACATATAGGTTATGATGGGTCCATAAATCCAAAAAACTGTACTAACAAGCACCGCACCCATGATACGAGCCAATGCATTCAATGAACGGAATATACCCAACGTTTGTCCTTGTTGTTCTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGCTAGTCCGATGTAGAAAACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGATAAATTAACTTTTCGTGTACAATGCCTTCTTGAACTAGCATCATTATTATCCCAATAAAGCCGAACATTTTGCCTTGATCAGAGCTTGAGAAATTAAAGCGAATTCTAGCCAAAAACAGTACTGTATATTCTATTCCGCAGTATACGCACAAGTAGCCGCACCAAAAGTATGCCANA]
[+] EMBL CD073868 [AAACTTCATGTTAAGTCACTGCTTTAAATTCTAAAGGATTTGATTAATTTTAACAGCAAAAGCATTTATCAAACTATTTAGGAAATTGTCTGTGATGGTACGCGATAATGTGAATCAATTAATAACAAAGAAACTTGTTTAGTAATAAATATACAACAATTTGCCTCATGGTCTGTTGATAATTTACTCGTCCTTGTATGTTTGTTCGGACTGGCATTTGGTTACTTCTAAAGTAATTTCCTTGTAAATAAGCAGTAAACCTAGGAGGATAGTACATGACATATAGGTTATGATGGGTCCATAAATCCAAAAAACTGTACTAACAAGCACCGCACCCATGATACGAGCCAATGCATTCAATGAACGGAATATACCCAACGTTTGTCCTTGTTGTTCTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGCTAGTCCGATGTAGAAAACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAA ]
[+] EMBL CD076690 [ CTTTAAATTCTAAAGGATTTGATTAATTTTAACAGCAAAAGCATTTATCAAACTATTTAGGAAATTGTCTGTGATGGTACGCGATAATGTGAATCAATTAATAACAAAGAAACTTGTTTAGTAATAAATATACAACAATTTGCCTCATGGTCTGTTGATAATTTACTCGTCCTTGTATGTTTGTTCGGACTGGCATTTGGTTACTTCTAAAGTAATTTCCTTGTAAATAAGCAGTAAACCTAGGAGGATAGTACATGACATATAGGTTATGATGGGTCCATAAATCCAAAAAACTGTACTAACAAGCACCGCACCCATGATACGAGCCAATGCATTCAATGAACGGAATATACCCAACGTTTGTCCTTGTTGTTCTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGCTAGTCCGATGTAGAAAACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTC ]
[+] EMBL AI067029 [ TGGTCTGTTGATAATTTACTCGTCCTTGTATGTTTGTTCGGACTGGCATTTGGTTACTTCTAAAGTAATTTCCTTGTAAATAAGCAGTAAACCTAAGAGGATAGTACATGACA ATAc ]
[-] EMBL CD197863 [ AACTGTACTAACAAGCACCGCACCCATGATACGAGCCAATGCATTCAATGAACGGAATATACCCAACGTTTGTCCTTGTTGTTCTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGCTAGTCCGATGTAGAAAACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGATAAATTAACTTTTCGTGTACAAT ]
[-] EMBL CD077356 [ CTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGATAGTCCGATGTAGAAAACGAAAATATCTGTGGCAAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCAAAGTAT ]
[+] EMBL CD179848 [ AACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGAAAAATTAACTTTTCGTGTACAATGCCTTCTTGAACTAGCATCATTATTATCCCAATAAAGCCGAACATTTTGCCTTGATCAGAGCTTGAGAAATTATAGCGAATTCTAGCCAAAAACAGTA ]
[+] EMBL CD179929 [ AACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGATAAATTAACTTTTCGTGTACAATGCCTTCTTGAACTAGCATCATTATTATCCCAATAAAGCCGAACATTTTGCCTTGATCAGAGCTTGAGAAATTAAAGCGAATTCTAGCCAAAAACAGTACTGTATATTCTATTCCGCAGTATACGCACAAGTAGCCGCACCAAAAGTATGCCANA]
[+] EMBL CD179923 [ AACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGATAAATTAACTTTTCGTGTACAATGCCTTCTTGAACTAGCATCATTATTATCCCAATAAAGCCGAACATTTTGCCTTGATCAGAGCTTGAGAAATTAAAGCGAATTCTAGCCAAAAACAGTACTGTATATTCTATTCCGCAGTATACGCACAAGTAGCCGCACCAGAAGTATGCC ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||