These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8956#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 797 fasta sequence [GCGGCCAAGATTCGGTCCGTG-AGTTAAGAGTGTAACATTTGCAACAAGATTAAACACAAAGGCCTTCGATGATTCGAAGATTATTGACCTACTTTAGATCCCTAAAAACGGAATCCCTTCAATATCACAAATTCTCCACAACCCCCAAGCTTTTGGACCTAAGTGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC-GAGCAGTTCAGACAC-TAACCAGT-GAACATCTTTCTCCTAAAGTTATACCAA-GTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATCAAAAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTAGAATAAACTTATATAGACCTTAGTGTATATAATGTAAATAAATACTTAAATATCTAAAAAAAAAAAAAAAAAAAA] [+] EMBL CD077706 [GCGGCCAAGATTCGGTCCGAG GGTTAAGAGTGTAACATTTGCAACAAGATTAAACACAAAGGCCTTCGATGATTCGAAGATTATTGACCTACTTTAGATCCCTAAAAACGGAATCCCTTCAATATCACAAATTCTCCACAACCCCCAAGCTTTTGGACCTAAGTGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAA ] [+] EMBL CD084322 [ gaGGGCGGTGTAGTTAAGAGTGT ACA TTGCAACAAGATTAAACACAAAGGCCTTCGATGATTCGAAGATTATTGACCTACTTTAGATCCCTAAAAACGGAATCCCTTCAATATCACAAATTCTCCACAACCCCCAAGCTTTTGGACCTAAGTGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC GAGCAGTTCAGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACA ] [+] EMBL CD082661 [ GTC AGTTAAGAGTGTAACATTTGCAACAAGATTAAACACAAAGGCCTTCGATGATTCGAAGATTATTGACCTACTTTAGATCCCTAAAAACGGAATCCCTTCAATATCACAAATTCTCCACAACCCCCAAGCTTTTGGACCTAAGTGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC GAGCAGTTCAGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATC AAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAAC ATGGAANCAAAGTGATTATCTCGACGAAGATTCGATTT AAGACTATTAGAAATAAC TGTATAGACCCTAGTGTATATAATGTAAATAAATAC ] [-] EMBL CD077045 [ TGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC GAGCAGTTCAGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACAATCAGATAAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATCAAAAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTAGAATAAACTTATATAGACCTTAGTGTATATAATGTAAATAAATACT ] [+] EMBL SMAA28833 [ gTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTT GGTCATGGCAGTTCAGACACTTAACCAGTGGAACATCTTTCTCCTAAAGTTATACCAAGGTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTG ] [-] EMBL CD076257 [ CTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC GAGCAGTTCAGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATC AAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTAGAATAAACTTGTATAGACCTTAGTGTATATAATGTAAATAAATACT ] [-] EMBL AI395366 [ AATTCGAAATGGGTGAATGGGTTGCTCCAAAGGTCGTGGAGTCAGTAGACCCTTTGGGTC GAGCAGTTCGGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACAATCCGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATCAAAAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTGGAATAAACTTATATAGACCTTAGTGTATATAATGTAAATAAATACTTAAATATCTAAAAAAAAAAAAAAAAAAAA] [-] EMBL AI395490 [ CAGTTCAGACAC TACCCAGT GAACATCTTTCTCATAAAGTTATACCAA GTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATCAAAAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTAGAATAAACTTATATAGACCTTAGTGTATATAATGTAAATAAATACTTAAATATCTAAAAAAAAAAAAAAAAn ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||