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Schistosoma mansoni
cluster # 8956 cluster # 8956       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8956#0 length = 797 sequences # 8  

consensusID : consensus_8956#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 797
fasta sequence
                              [GCGGCCAAGATTCGGTCCGTG-AGTTAAGAGTGTAACATTTGCAACAAGATTAAACACAAAGGCCTTCGATGATTCGAAGATTATTGACCTACTTTAGATCCCTAAAAACGGAATCCCTTCAATATCACAAATTCTCCACAACCCCCAAGCTTTTGGACCTAAGTGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC-GAGCAGTTCAGACAC-TAACCAGT-GAACATCTTTCTCCTAAAGTTATACCAA-GTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATCAAAAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTAGAATAAACTTATATAGACCTTAGTGTATATAATGTAAATAAATACTTAAATATCTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CD077706             [GCGGCCAAGATTCGGTCCGAG GGTTAAGAGTGTAACATTTGCAACAAGATTAAACACAAAGGCCTTCGATGATTCGAAGATTATTGACCTACTTTAGATCCCTAAAAACGGAATCCCTTCAATATCACAAATTCTCCACAACCCCCAAGCTTTTGGACCTAAGTGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD084322             [           gaGGGCGGTGTAGTTAAGAGTGT ACA TTGCAACAAGATTAAACACAAAGGCCTTCGATGATTCGAAGATTATTGACCTACTTTAGATCCCTAAAAACGGAATCCCTTCAATATCACAAATTCTCCACAACCCCCAAGCTTTTGGACCTAAGTGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC GAGCAGTTCAGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACA                                                                                                                                                                                                                                                    ]
[+] EMBL CD082661             [                  GTC AGTTAAGAGTGTAACATTTGCAACAAGATTAAACACAAAGGCCTTCGATGATTCGAAGATTATTGACCTACTTTAGATCCCTAAAAACGGAATCCCTTCAATATCACAAATTCTCCACAACCCCCAAGCTTTTGGACCTAAGTGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC GAGCAGTTCAGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATC  AAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAAC ATGGAANCAAAGTGATTATCTCGACGAAGATTCGATTT AAGACTATTAGAAATAAC TGTATAGACCCTAGTGTATATAATGTAAATAAATAC                              ]
[-] EMBL CD077045             [                                                                                                                                                                    TGAGTTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC GAGCAGTTCAGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACAATCAGATAAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATCAAAAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTAGAATAAACTTATATAGACCTTAGTGTATATAATGTAAATAAATACT                             ]
[+] EMBL SMAA28833            [                                                                                                                                                                        gTTTTCGATGATAAGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTT GGTCATGGCAGTTCAGACACTTAACCAGTGGAACATCTTTCTCCTAAAGTTATACCAAGGTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTG                                                                                                                                                                                                            ]
[-] EMBL CD076257             [                                                                                                                                                                                            CTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTCGACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACATGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGCGCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACCGTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAGACCCGTTGGGTC GAGCAGTTCAGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATC  AAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTAGAATAAACTTGTATAGACCTTAGTGTATATAATGTAAATAAATACT                             ]
[-] EMBL AI395366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATTCGAAATGGGTGAATGGGTTGCTCCAAAGGTCGTGGAGTCAGTAGACCCTTTGGGTC GAGCAGTTCGGACAC TAACCAGT GAACATCTTTCTCCTAAAGTTATACCAA GTCATGCACAATCCGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATCAAAAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTGGAATAAACTTATATAGACCTTAGTGTATATAATGTAAATAAATACTTAAATATCTAAAAAAAAAAAAAAAAAAAA]
[-] EMBL AI395490             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAGTTCAGACAC TACCCAGT GAACATCTTTCTCATAAAGTTATACCAA GTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGTTGGAGCGCGAGAAGCGAATTATCAAAAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCGACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTATTAGAATAAACTTATATAGACCTTAGTGTATATAATGTAAATAAATACTTAAATATCTAAAAAAAAAAAAAAAAn   ]


>consensus_8956#0 GCGGCCAAGATTCGGTCCGTGAGTTAAGAGTGTAACATTTGCAACAAGATTAAACACAAA GGCCTTCGATGATTCGAAGATTATTGACCTACTTTAGATCCCTAAAAACGGAATCCCTTC AATATCACAAATTCTCCACAACCCCCAAGCTTTTGGACCTAAGTGAGTTTTTCGATGATA AGAAAAACTGGGGAGAACCAACTGTGTACAGTGGAAGACCATGGCGCAAAGAAGAGCTTC GACTGAAGAGTAATGTAGATCTACATAAACTGTGGTATGTGCTTCTGAAGGAGCGTAACA TGCTGATGACTATGGAAGAAGAGCACTTCCGTTGTTTGGAGCGAATGCCTAATCCTGAGC GCTTTGAGAAGGTTGAGGAGAGTATGGAGAATCTTTTAATGGTCGTAGAAGAACGTAACC GTGCAGAAGATGAATTAGAAATGGGTGAATGGGTTGGTCCAAAGGTCGTGGAGTCAGTAG ACCCGTTGGGTCGAGCAGTTCAGACACTAACCAGTGAACATCTTTCTCCTAAAGTTATAC CAAGTCATGCACAATCAGATGAGCGAATGTGGAGTGAAAAGACGGTGAAATTGTTGCGGT TGGAGCGCGAGAAGCGAATTATCAAAAGGCGCGAAAGTCAACGTAGGCAACGTTATTTCG ACAGGCTTAAACAATGGAACAAAAGTGATTATCTCGACGAAGATTCGATTTAAAGACTAT TAGAATAAACTTATATAGACCTTAGTGTATATAATGTAAATAAATACTTAAATATCTAAA AAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)