These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8982#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 380 fasta sequence [TGTCTTTTC-AAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC-TTTTTTGTGTGAGATGAACATAGTCACTCCTGAGGAAGTCAAGCTGCATGGATTTTAATTGCATGTTGACATTTCAATTTTGTGGTCATTTCAAAGAGTCACTACTTCTTCAGAT] [+] EMBL CD158015 [TGTCTTTTCAAAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACT ] [+] EMBL CD202722 [ CTTTTC AAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTCTTTTTTTGTGTGAGATGAACAT ] [+] EMBL CD145991 [ CTTTTC AAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAATGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACAT ] [-] EMBL CD149822 [ TTTC AAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC CTTTTTGTGTGAGATGAACAT ] [+] EMBL AI067592 [ TAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAAGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACATAGTCACTCCTGAGGAAGTCAAGCTGCATGGATTTTAATTGCATGTTGACATTTCAATTTTGTGGTCATTTCAAAGAGTCACTACTTCTTCAGAT] [+] EMBL CD145917 [ AATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACAT ] [+] EMBL CD146007 [ AATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACAT ] [+] EMBL CD145965 [ GTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACAT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||