Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9013 cluster # 9013       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9013#0 length = 848 sequences # 8  

consensusID : consensus_9013#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 848
fasta sequence
                              [GGTTTTCGTGCTTCCAGTGAAGTTGATACCAGCAAGTTGAGGGTGCTCACAAATTACTTTACCAAATGTTGGGCCATCTGCTGGGACAAAGTTGATTACGCCAGGGGGTAAACCTGCTTCGCGGAATAACCTGTAAACAAGGTAATTAGAATATACGGATGTATCAGAGGGTTTCCAAATCACAACATTCCCCATTAAAGCTGGGGCACTTGCTAGGTTCCCTGCAATAGCGGTAAAATTAAATGGTGATATAGCAGCCCAAAACCCTTCATTTGCTCGGTAAACTACTTTATTCTTTGCATCCTGGGTATTGATTGGTTTATATCGCAGAGCTTCTGAGGCAAATTGCACATTAAAACGCAAGAAATCTGCTAATTCTGCAGCCGCGTCAATCTCAGCCTGAAAAATTGTTTTTGCTTGACCGAGTATAGTTGATGCCAACAATTCCATGCGATATTTATCACTAACAAGGTCCGCTGCTTTTAAGAATACCTTAGCGCGTTCATCAAAACTTGTACGTGACCACGTTTTGCGAGCTATTAAACAAGACTCAATTGCACTTTTGATTTGCTCTCCTGAGGCATGATAAAAATTGGCCAATGTTTTCGAATGCTCAAATGGCAAAATCTGCCTTCGAGGTTGTCCGGATGATAACTCGTTTGAATCAATGCATATAGGCACATGATAAGGCCCGTTCGAAATCATAGTATCCAACGTACTATCCAACCTCTGACGTTCCGTACTACCAGGCTTATGCAACAGAACTGGTTCGTTTGTGACCTGGAAAAGTCTGCTCAGTAGTTTTTGATACTGCCATTTCGGAACACAACGACAAACGTTACACGACC]

[+] EMBL CD060833             [GGTTTTCGTGCTTCCAGTGAAGTTGATACCAGCAAGTTGAGGGTGCTCACAAATTACTTTACCAAATGTTGGGCCATCTGCTGGGACAAAGTTGATTACGCCAGGGGGTAAACCTGCTTCGCGGAATAACCTGTAAACAAGGTAATTAGAATATACGGATGTATCAGAGGGTTTCCAAATCACAACATTCCCCATTAAAGCTGGGGCACTTGCTAGGTTCCCTGCAATAGCGGTAAAATTAAATGGTGATATAGCAGCCCAAAACCCTTCATTTGCTCGGTAAACTACTTTATTCTTTGCATCCTGGGTATTGATTGGTTTATATCGCAGAGCTTCTGAGGCAAATTGCACATTAAAACGCAAGAAATCTGCTAATTCTGCAGCCGCGTCAATCTCAGCCTGAAAAATTGTTTTTGCTTGACCGAGTATAGTTGATGCCAACAATTCCATGCGATATTTATCACTAACAAGGTC                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD159215             [                                                                                              ATTACGCCAGGGGGTAAACCTGCTTCGCGGAATAACCTGTAAACAAGGTAATTAGAATATACGGATGTATCAGAGGGTTTCCAAATCACAACATTCCCCATTAAAGCTGGGGCACTTGCTAGGTTCCCTGCAATAGCGGTAAAATTAAATGGTGATATAGCAGCCCAAAACCCTTCATTTGCTCGGTAAACTACTTTATTCTTTGCATCCTGGGTATTGATTGGTTTATATCGCAGAGCTTCTGAGGCAAATTGCACATTAAAACGCAAGAAATCTGCTAATTCTGCAGCCGCGTCAATCTCAGCCTGAAAAATTGTTTTTGCTTGACCGAGTATAGTTGATGCCAACAATTCCATGCGATATTTATCACTAACAAGGTCCGCTGCTTTTAAGAATACCTTAGCGCGTTCATCAAAACTTGTACGTGACCACGTTTTGCGAGCTATTAAACAAGACT                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD166544             [                                                                                                                                                              tccatTCAGAGGGTT  CAAATCACAACATTCCCCATT AAGCTGGGGCACTTGCTAGGTTCCCTGCAATAGCGGTAAAATTAAATGGTGATATAGCAGCCCAAAACCCTTCATTTGCTCGGTAAACTACTTTATTCTTTGCATCCTGGGTATTGATTGGTTTATATCGCAGAGCTTCTGAGGCAAATTGCACATTAAAACGCAAGAAATCTGCTAATTCTGCAGCCGCGTCAATCTCAGCCTGAAAAATTGTTTTTGCTTGACCGAGTATAGTTGATGCCAACAATTCCATGCGATATTTATCACTAACAAGGTCCGCTGCTTTTAAGAATACCTTAGCGCGTTCATCAAAACTTGTACGTGACCACGTTTTGCGAGCTATTAAACAAGACTCAATTGCACTTTTGATTTGCTCTCCTGAGGCATGATAAAAATTGGCCAATGTTTTCGAATGCTCAAATGGCAAAATCTGCCTTCGAGGTTGTCCGGATGATAACTCGT                                                                                                                                                                                             ]
[+] EMBL CD152895             [                                                                                                                                                                                  ATCACAACATTCCCCATTAAAGCTGGGGCACTTGCTAGGTTCCCTGCAATAGCGGTAAAATTAAATGGTGATATAGCAGCCCAAAACCCTTCATTTGCTCGGTAAACTACTTTATTCTTTGCATCCTGGGTATTGATTGGTTTATATCGCAGAGCTTCTGAGGCAAATTGCACATTAAAACGCAAGAAATCTGCTAATTCTGCAGCCGCGTCAATCTCAGCCTGAAAAATTGTTTTTGCTTGACCGAGTATAGTTGATGCCAACAATTCCATGCGATATTTATCACTAACAAGGTCCGCTGCTTTTAAGAATACCTTAGCGCGTTCAACAAAACTTGTACGTGACCACGTTTTGCGAGCTATTAAACAAGACTCAATTGCACTNTTGATTTGCTCTCCTGAGGCATGATAAAA                                                                                                                                                                                                                                                                 ]
[+] EMBL CD189580             [                                                                                                                                                                                                                                                                                                                            GGTTTATATCGCAGAGCTTCTGAAGCAAATTGCACATTAAAACGCAAGAAATCTGCTAATTCTGCAGCCGCGTCAATCTCAGCCTGAAAAGTTGTTTTTGCTTGACCGAGTATAGTTGATGCCAACAATTCCATGCGATATTTATCACTAACAAGGTCCGCTGCTTTTAAGAATACCTTAGCGCGTTCATCAAAACTTGTACGTGACCACGTTTTGCGAGCTATTAAACAAGACTCAATTGCACTTTTGATTTGCTCTCCTGAGGCATGATAAAAATTGGCCAATGTTTTCGAATGCTCAAATGGCAAAATCTGCCTTCGAGGTTGTCCGGATGATAACTCGTTTGAATCAATGCATATAGGCACATGATAAGGCCCGTTCGAAATCATAGTATCCAACGTACTATCCAACCTCTGACGTTCCGTACTACCAGGCTTATGCAACAGAACTGGT                                                                               ]
[-] EMBL CD133457             [                                                                                                                                                                                                                                                                                                                             GTTTATATCGCAGAGCTTCTGAGGCAAATTGCACATTAAAACGCAAGAAATCTGCTAATTCTGCAGCCGCGTCAATCTCAGCCTGAAAAATTGTTTTTGCTTGACCGAGTATAGTTGATGCCAACAATTCCATGCGATATTTATCACTAACAAGGTCCGCTGCTTTTAAGAATACCTTAGCGCGTTCATCAAAACTTGTACGTGACCACGTTTTGCGAGCTATTAAACAAGACTCAATTGCACTTTTGATTTGCTCTCCTGAGGCATGATAAAAATTGGCCAATGTTTTCGAATGCTCAAATGGCAAAATCTGCCTTCGAGGTTGTCCGGATGATAACTCGTTTGAATCAATGCATATAGGCACATGATAAGGCCCGTTCGAAATCATAGTATCCAACGTACTATCCGACCTCTGACGTTCCGTACTACCAGGCTTATGCAACAGAACTGGTT                                                                              ]
[+] EMBL CD189221             [                                                                                                                                                                                                                                                                                                                                                                                                                            TTTGCTTGACCGAGTATAGTTGATGCCAACAATTCCATGCGATATTTATCACTAACAAGGTCCGCTGCTTTTAAGAATACCTTAGCGCGTTCATCAAAACTTGT                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD152685             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAATCAATGCATATAGGCACATGATAAGGCCCGTTCAAAATCATAGTATCCAACGTACTATCCAACCTCTGACGTTCCGTACTACCAGGCTTATGCAACAGAAATGGTTCGTTTGTGACCTGGAAAAGTCTGCTCAGTAGTTTTTGATACTGCCATTTCGGAACACAACGACAAACGTTACACGACC]


>consensus_9013#0 GGTTTTCGTGCTTCCAGTGAAGTTGATACCAGCAAGTTGAGGGTGCTCACAAATTACTTT ACCAAATGTTGGGCCATCTGCTGGGACAAAGTTGATTACGCCAGGGGGTAAACCTGCTTC GCGGAATAACCTGTAAACAAGGTAATTAGAATATACGGATGTATCAGAGGGTTTCCAAAT CACAACATTCCCCATTAAAGCTGGGGCACTTGCTAGGTTCCCTGCAATAGCGGTAAAATT AAATGGTGATATAGCAGCCCAAAACCCTTCATTTGCTCGGTAAACTACTTTATTCTTTGC ATCCTGGGTATTGATTGGTTTATATCGCAGAGCTTCTGAGGCAAATTGCACATTAAAACG CAAGAAATCTGCTAATTCTGCAGCCGCGTCAATCTCAGCCTGAAAAATTGTTTTTGCTTG ACCGAGTATAGTTGATGCCAACAATTCCATGCGATATTTATCACTAACAAGGTCCGCTGC TTTTAAGAATACCTTAGCGCGTTCATCAAAACTTGTACGTGACCACGTTTTGCGAGCTAT TAAACAAGACTCAATTGCACTTTTGATTTGCTCTCCTGAGGCATGATAAAAATTGGCCAA TGTTTTCGAATGCTCAAATGGCAAAATCTGCCTTCGAGGTTGTCCGGATGATAACTCGTT TGAATCAATGCATATAGGCACATGATAAGGCCCGTTCGAAATCATAGTATCCAACGTACT ATCCAACCTCTGACGTTCCGTACTACCAGGCTTATGCAACAGAACTGGTTCGTTTGTGAC CTGGAAAAGTCTGCTCAGTAGTTTTTGATACTGCCATTTCGGAACACAACGACAAACGTT ACACGACC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)