These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9017#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 580 fasta sequence [TCTTGAATTTTAAGGTTGCTTGCTCGTGACTGAAGGCCATCCCTCAAGGTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG-AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTCTGATTTGTAATAGGAAGAATAATAGCGCTGTAAAAATAATTATAATTTGACTTGATTGCAAAAAATTTTTCTGAATTCAAGTAAATTGTATATTCAC] [+] EMBL CD076415 [TCTTGAATTTTAAGGTTGCTTGCTCGTGACTGAAGGCCATCCCTCAAGGTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTCTGATTTGTAATAGGAAGAATAATAGCGCTGTAAAAATAATTATAATTTGACTTGATTGCAAAAAA ] [-] EMBL CD082827 [ CTTGAATTTTAAGGTTGCTTGCTCGTGACTGAAGGCCATCCCTCAAGGTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTCTGA TTGTAATAGGAAGAATAATAGCGCTGaa ] [-] EMBL CD062039 [ attGCCATCCCTCAAGGTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAGAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCGGACGAGGATTCACTTTAACACTTGTTCAACTGAA ] [+] EMBL BF936900 [ GTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAGAAGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTCTGATTTGTAATAGGAAGAAT ATAGCGCTGTAAAAATAATTATAATTTGACTTGATTGCAATCTTTTTTTCTGAATTCAAGTAAATTGTATATTCAC] [+] EMBL AI975457 [ GTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCAC ] [+] EMBL CD069501 [ AAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTT ] [-] EMBL AI977327 [ TTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTTTTCGGGCACGCAGAAATCTACCTCAGTAAAGTTTGATCGTCGTCGTGCAGCAATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTGTGATTTGTAATAGGAAGAATAA ] [-] EMBL CD068415 [ CATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAG TTGATCGT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||