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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9017#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 580 fasta sequence
[TCTTGAATTTTAAGGTTGCTTGCTCGTGACTGAAGGCCATCCCTCAAGGTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG-AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTCTGATTTGTAATAGGAAGAATAATAGCGCTGTAAAAATAATTATAATTTGACTTGATTGCAAAAAATTTTTCTGAATTCAAGTAAATTGTATATTCAC]
[+] EMBL CD076415 [TCTTGAATTTTAAGGTTGCTTGCTCGTGACTGAAGGCCATCCCTCAAGGTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTCTGATTTGTAATAGGAAGAATAATAGCGCTGTAAAAATAATTATAATTTGACTTGATTGCAAAAAA ]
[-] EMBL CD082827 [ CTTGAATTTTAAGGTTGCTTGCTCGTGACTGAAGGCCATCCCTCAAGGTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTCTGA TTGTAATAGGAAGAATAATAGCGCTGaa ]
[-] EMBL CD062039 [ attGCCATCCCTCAAGGTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAGAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCGGACGAGGATTCACTTTAACACTTGTTCAACTGAA ]
[+] EMBL BF936900 [ GTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAGAAGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTCTGATTTGTAATAGGAAGAAT ATAGCGCTGTAAAAATAATTATAATTTGACTTGATTGCAATCTTTTTTTCTGAATTCAAGTAAATTGTATATTCAC]
[+] EMBL AI975457 [ GTTGTACATTTATATGCTGTGGTTATGATCCCCGGTGGCGAGTCTGGCAATGATAAAGACACAAAGCAAAAAGAGGATGCGGAGAAAAGAAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCAC ]
[+] EMBL CD069501 [ AAATCAGGAGATTCGTGCCAGTATATTAGCACAAATTCTCGATCAGGATGCAAG AGCACGTTTGAATACAATTGCGATCACGAAACCAGAAAAAGCTAAAATGGTTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAGTTTGATCGTCGTCGTGCAGCTATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTT ]
[-] EMBL AI977327 [ TTGAAAATATGCTAATCAACATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTTTTCGGGCACGCAGAAATCTACCTCAGTAAAGTTTGATCGTCGTCGTGCAGCAATCGATTCAGACGAGGATTCACTTTAACACTTGTTCAACTGAATTTCCGAAGTAAGGCATGTATATGGATGAAGATTCGGAGATATTGTAGAAATTTTGTGATTTGTAATAGGAAGAATAA ]
[-] EMBL CD068415 [ CATGGCTCAAACTGGACGTCTTGGACCAAAGTTGAATGAAGAGCAGTTAAAACAAATCCTCCTGCAGGTTTCTTCGGGCACACAGAAATCTACCACAGTAAAG TTGATCGT ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||