These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9018#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1115 fasta sequence [CTCGGTCACGAGGACTTATTCAAATAATAACAATGTTGTAGGGTCATATGAGTGTCGAGTTACGGATAAAGATCCAGATATGAAAGGGCTTCTTGTGAGGGCGTCAAGTAGAACCATATTGGGTGAAATTCATAGCACTGCCTCTCTCGAAGCAAATATAACGTTCTCTCTTGAAACACTTTCCCAAACAAAATTAGAAACCATTGTGATGAACGGAAATGTTGTGGAAAGAAAGTCTTCCATCGAACTTGTTGAGAATGTGTATGAAATCAGTTGTACAGAATCAATGAATGGAGAAATTACCTTTTCAACTAGGAAACAGTTAGCCCAGTCAAATATATTAGGGCTAATTGCTGAGGGTTCGGATTTGGTTTTCCAGCGAGTTCT-GGTTAAATCTGCTTTCTCTG-TTCCCTTCGAGGTTATTGGTTTAGATACAGATTATAATCTAGCCACGGTGTCCTATATTAATCTTGGAGAAAGAAACGTATTCGTCGGAGATAGTGAAATATCAGTGAGAGGAATTCAAAGGACTGTGCATTCTCAAAAAGCTCTCCCATCGTCCTGGCAGACCTACTTTATGGAGGACGGCCATATGATACTTAGAATACAAGTTGGCTCTCCGATCACTATAAAAGCGAACACCATACCTGAACTGTTCAAAAAAGAAAAGTATTTACCTAAACCAGTCGTCGCAAAGGTCTCCTTAAATTGGGAAGATGATCTGGAACTCTATTCACGTTTTTTAGATCGAAAGGATGAAATCAAAGCTCAATATCTTTTATATCTGCGTGATCATCCAGAGATACATGATATGATTTCTGACTTTATTAAATCATTATTACTTCATAAGCCAGATGAGGTAGTAAAATATGCTTCAGAATACTTTAAGAGTTTTTCAGCTCGCGCGTTACCGAGTAGAATATTTTCTGTTAAGACTATATAAGTGTAATTACTTTCTATGAGGACATATGTAATTTATTTTATTTTTATTCTTCAGATACGTGTTTAGACCGTTTTATTTTTTCATTATTTACTTGAAAATCAGGTTTTCCGTTTTTGTTTTCACCCGATGTACTTTGGTAACTGCATAATTAATTTTTGAAAATAAAAATTAG] [+] EMBL CD082308 [CTCGGTCACGAGGACTTATTCAAATAATAACAATGTTGTAGGGTCATATGAGTGTCGAGTTACGGATAAAGATCCAGATATGAAAGGGCTTCTTGTGAGGGCGTCAAGTAGAACCATATTGGGTGAAATTCATAGCACTGCCTCTCTCGAAGCAAATATAACGTTCTCTCTTGAAACACTTTCCCAAACAAAATTAGAAACCATTGTGATGAACGGAAATGTTGTGGAAAGAAAGTCTTCCATCGAACTTGTTGAGAATGTGTATGAAATCAGTTGTACAGAATCAATGAATGGAGAAATTACCTTTTCAACTAGGAAACAGTTAGCCCAGTCAAATATATTAGGGCTAATTGCTGAGGGTTCGGATTTGGTTTTCCAGCGAGTTCT GGTTAAATCTGCTTTCTCTG TTCCCTTCGAGGTTATTGGTTTAGATACAGATTATAATCTAGCCACGGTGTCCTATATTAATCTTGGAGAAAGAAACGTATTCGTCGGAGATAGTGAAATATCAGTGAGAGGAATTCAAAGGACTGTGCATTCTCAAAAAGCTCTCCCATCGTCCTGGCAGACCTACTTTATGGAGGACGGCCATATGATACTTAGAATACAAGTTGGCTCTCCGATCACTATAAAAGCGAACACCATACCTGAACTGTTCAAA ] [-] EMBL CD142662 [ CACTTTCNCAAACAAAATTAGAAACCATTGTGATGAACGGAAATGTTGTGGAAAGAAAGTCTTCCATCGAACTTGTTGAGAATGTGTATGAAATCAGTTGTACAGAATCAATGAATGGAGAAATTACCTTTTCAACTAGGAAACAGTTAGCCCAGTCAAATATATTAGGGCTAATTGCTGAGGGTTCGGATTTGGTTTTCCAGCGAGTTCT GGTTAAATCTGCTTTCTCTG TTCCCTTCGAGGTTATTGGTTTAGATACAGATTATAATCTAGCCACGGTGTCCTATATTAATCTTGGAGAAAGAAACGTATTCGTCGGAGATAGTGAAATATCAGTGAGAGGAATTCAAAGGACTGTGCATTCTCAAAAA ] [+] EMBL CD192403 [ AATTAGAAACCATTGTGATGAACGGAAATGTTGTGGAAAGAAAGTCTTCCATCGAACTTGTTGAGAATGTGTATGAAATCAGTTGTACAGAATCAATGAATGGAGAAATTACCTTTTCAACTAGGAAACAGTTAGCCCAGTCAAATATATTAGGGCTAATTGCTGAGGGTTCGGATTTGGTTTTCCAGCGAGTTCT GGTTAAATCTGCTTTCTCTG TTCCCTTCGAGGTTATTGGTTTAGATACAGATTATA ] [+] EMBL CD082944 [ GGAAATGTTGTGGAAAGAAAGTCTTCCATCGAACTTGTTGAGAATGTGTATGAAATCAGTTGTACAGAATCAATGAATGGAGAAATTACCTTTTCAACTAGGAAACAGTTAGCCCAGTCAAATATATTAGGGCTAATTGCTGAGGGTTCGGATTTGGTTTTCCAGCGAGTTCT GGTTAAATCTGCTTTCTCTG TTCCCTTCGAGGTTATTGGTTTAGATACAGATTATAATCTAGCCACGGTGTCCTATATTAATCTTGGAGAAAGAAACGTATTCGTCGGAGATAGTGAAATATCAGTGAGAGGAATTCAAAGGACTGTGCATTCTCAAAAAGCTCTCCCATCGTCCTGGCAGACCTACTTTATGGAGGACGGCCATATGATACTTAGAATACAAGTTGGCTCTCCGATCACTATAAAAGCGAACACCATACCTGAACTGTTCAAAAAAGAAAAGTATTTACCTAAACCAGTCGTCGCAAAGGTCTCCTTAAATTGGGAAGATGATCTGGAACTCTATTCACGTTTTTTAGATCGAAAGGATGAAATCAAAGCTCAATATCTTTTATATCTGCGTGATCATCCAGAGATACATGATATGATTTCTGACTNTATTA ] [-] EMBL CD141136 [ TTGCTGAGGGTTCGGATTTGG TTTCCAGCGAG TCTGGGTTAAATCTGC TTCTCTGTTTCCCTTCGAGG TATTGGTTTAGATACAGATTATAATCTAGCCACGGTGTCCTATATTAATCTTGGAGAAAGAAACGTATTCGTCGGAGATAGTGAAATATCAGTGAGAGGAATTCAAAGGACTGTGCATTCTCAAAAAGCTCTCCCATCGTCCTGGCAGACCTACTTTATGGAGGACGGCCATATGATACTTAGAATACAAGTTGGCTCTCCGATCACCATAAAAGCGAACACCATACCTGAACTGTTCAAAAAAGAAAAGTATTTACCTAAACCAGTCGTCGCAAAGGTCTC ] [-] EMBL CD062180 [ TACAGATTATAATCTAGCCACGGTGTCCTATATTAATCTTGGAGAAAGAAACGTATTCGTCGGAGATAGTGAAATATCAGTGAGAGGAATTCAAAGGACTGTGCATTCTCAAAAAGCTCTCCCATCGTCCTGGCAGACCTACTTTATGGAGGACGGCCATATGATACTTAGAATACAAGTTGGCTCTCCGATCACTATAAAAGCGAACACCATACCTGAACTGTTCAAAAAAGAAAAGTATTTACCTAAACCAGTCGTCGCAAAGGTCTCCTTAAATTGGGAAGATGATCTGGAACTCTATTCACGTTTTTTAGATCGAAAGGATGAAATCAAAGCTCAATATCTTTTATATCTGCGTGATCATCCAGAGATACATGATATGATTTCTGACTTTATTAAATCATTATTACTTCATAAGCCAGATGAGGTAGTAAAATATGCTTCAGAATACTTTAAGAGTTTTTCAGCTCGCGCGTTACCGAGTAGAATATTTTCTGTTAAGACTATATAAGTGTAAT ] [-] EMBL CD076532 [ CTATATTAATCTTGGAGAAAGAAACGTATTCGTCGGAGATAGTGAAATATCAGTGAGAGGAATTCAAAGGACTGTGCATTCTCAAAAAGCTCTCCCATCGTCCTGGCAGACCTACTTTATGGAGGACGGCCATATGATACTTAGAATACAAGTTGGCTCTCCGATCACTATAAAAGCGAACACCATACCTGAACTGTTCAAAAAAGAAAAGTATTTACCTAAACCAGTCGTCGCAAAGGTCTCCTTAAATTGGGAAGATGATCTGGAACTCTATTCACGTTTTTTAGATCGAAAGGATGAAATCAAAGCTCAATATCTTTTATATCTGCGTGATCATCCAGAGATACATGATATGATTTCTGACTTTATTAAATCATTATTACTTCATAAGCCAGATGAGGTAGTAAAATATGCTTCAGAATACTTTAAGAGTTTTTCAGCTCGCGCGTTACCGAGTAGAATATTTTCTGTTAAGACTATATAAGTGTAATTACTTTCTATGAGGACATATGTAATTTATTTTATTTTTATTCTTCAGATACGTGTTTAGACCGTTTTATTTTTTCATTATTTACTTG ] [-] EMBL CD075910 [ GGCTCTCCGATCCCTATAAAAGCGAACCCCATACCTGAACTGTTCAAAAAAGAAAAGTATTTACCTAAACCAGTTGTCGCAAAGGTTTCCTTAAATTGGGAAGATGATTTGGAACTCTATTCACGTTTTTTAGATCGAAAGGATGAAATCAAAGCTCAATATCTTTTATATCTGGGTGATCATCCAGAGATACATGATATGATTTTTGACTTTATTAAATCATTATTACTTCATAAGCCAGATGAGGTAGTAAAATATGCTTCAGAATACTTTAAGAGTTTTTCAGCTCGCGCGTTACCGAGTAGAATATTTTTTGTTAAGACTATATAAGTGTAATTACTTTTTATGAGGACATATGTAATTTATTTTATTTTTATTTTTCAGAAACGTGTTTAGACCGTTTTATTTTTTCATTATTTACTTGAAAATCAGGTTTTCCGTTTTTGTTTTCACCCGATGTACTTTGGTAACTGCATAATTAATTTTTGAAAATAAAAATTAG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||