These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9030#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 998 fasta sequence [TTAGCCTGAAGAGTTTCTGCTTTTCCTAATTCTGTCTTAGATTCCTCCACTGTTAAAATAGCAATTTTCGCCTTTTCTGACTTGACTGGAATCGAAATCCCCAACCAATCAACTTCACTAACTTGACTAGCTTGCTTGGATCGAGCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAATTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGAAGTAAAACATCATAGATCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTCTGTAATTCG-AAGAATAAAATTCCACGAATCCACTGCTTGTATGCCCGCAATTCCAGTTTAGTTTGTGCATCTAATAAGGACAAATCATCCTCCATACTACACAAAAGTTCGGCACGTGCAACAGCTTTACGAAGTCGAGAACACATCTGGAAACGCTTGCGAATTTCAGTGCTTGATTCAGCCTTCAATTGCATAGCATATGCCCACGATCGTTC-ATTTCAAAGATTGCTAAAATGATGAAGCGTGGATCTGTCACAATATCCGGAGTTAACTTTTTAGGGACAACCTTTGATCGATTCCCTTGCTGAAAATGTAGTGATTTCCTCATTCTCCTGAGTTTTCGGGAAATATACTGATGATAGCGTTGATAATCACCATGACGTAAACCATGTTGTTGCTGAGCTGACTTAACAAGCGACAGCACGGGGATACTTGACGGTGTTATAGTAGTGTTTTCTGTAGTTTCCATTCAAAAACGTATGATGGTTTAGTAAGGAATAAGCGACTATCTTTAACAGAAACAACTTTAGTTGTGAGAACTTTCCAAAATACAATAAGTCATATAATACACCTGAGTCTACAACGTCAGGAGGTTTATAAAT] [-] EMBL CD136726 [TTAGCCTGAAGAGTTTCTGCTTTTCCTAATTCTGTCTTAGATTCCTCCACTGTTAAAATAGCAATTTTCGCCTTTTCTGACTTGACTGGAATCGAAATCCCCAACCAATCAACTTCACTAACTTGACTAGCTTGCTTGGATCGAGCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAATTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGGAGTAAAACATCATAGATCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTC ] [-] EMBL CD136821 [TTAGCCTGAAGAGTTTCTGCTTTTTCTAATTCTGTCTTAGATTCCTCCACTGTTAAAATAGCAATTTTCGCCTTTTCTGACATGACTGGAATCGAAATCCCCAACCAATCAACTTCACTAACTTGACTAGCTTGCTTGGATCGAGCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAATTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGAAGTAAAACATCATAGACCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTCTGTAATTCGTATGAAggc ] [-] EMBL CD153191 [ TTTCGCCTTTTCTGACTTGACTGGAATCGAAATCCCCAACCAATCAACTTCACTAACTTGACTAGCTTGCTTGGATCGAGCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAATTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGAAGTAAAACATCATAGATCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTCTGTAATTCG AAGAATAAAATTCCACGAATCCACTGCTTGTATGCCCGCAATTCCAGTTTAGTTTGTGCATCTAATAAGGACAAATCATCCTCCATACTACACAAAAGTT ] [+] EMBL CD121334 [ GCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAGTTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGAAGTAAAACATCATAGATCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTCTGTAATTCG AAGAATAAAATTCCACGAATCCACTGCTTGTATGCCCGCAATTCCAGTTTAGTTTGTGCATCTAATAAGGACAAATCATCCTCCATACTACACAAAAGTTCGGCACGTGCAACAGCTTTACGAAGTCGAGAACACATCTGGAAACGCTTGCGAATTTCAGTGCTTGATTCAGCCTTCAATTGCATAGCATATGCCCACGATCGTTC ATTTCAAA ] [-] EMBL CD121392 [ ATCTGGAAACGCTTGCGAATTTCAGTGCTTGATTCAGCCTTCAATCGCATAGCATATGCCCACGATCGTTCAATTTCAAAGATTGCTAAAATGATGAAGCGTGGATCTGTCACAATATCCGGAGTTAACTTTTTAGGGACAACCTTTGATCGATTCCCTTGCTGAAAATGTAGTGATTTCCTCATTCTCCTGAGTTTTCGGGAAATATACTGATGATAGCGTTGATAATCACCATGACGTAAACCATGTTGTTGCTGAGCTGACTTAACAAGCGACAGCACGGGGATACTTGACGGTGTTATAGTAGTGTTTTCTGTAGTTTCCATTCAAAAACGTATGATGGTTTAGTAAGGAATAAGCGACTATCTTTAACAGAAACAACTTTAGTTGTGAGAACTTTCCAAAATACAATAAGTCATATAATACACCTGAGTCTACAACGTCAGGAGGTTTATAAAT] [-] EMBL CD067365 [ TTCAAAGATTGCTAAAATGATGAAGCGTGGATCTGTCACAATATCCGGAGTTAACTTTTTAGGGACAA CTTTGATCGATTCCCTTGCTGAAAATGTAGTGATTTC ] [-] EMBL CD062987 [ acccTGCTAAAATGATGAAGCGTGGATCTGTCACAATATCCGGAGTTAACTTTTTAGGGACAACCTTTGATCGATTCCCTTGCTGAAAATGT ] [-] EMBL CD098015 [ GATTTCCTCATTCTCCTGAGTTTTCGGGAAATATACTGATGATAGCGTTGATAATCACCATGACGTAAACCATGTTGTTGCTGAGCTGACTTAACAAGCGACAGCACGGGGATACTTGACGGTGTTATAGTAGTGTTTTCTGAAGTTTCCATTCAAAAACGTATGATGGTTTAGTAAGGAATAAGCGACTATCTTTAACAGAAACAACTTTAGTTGTGAGAACTTTCCAAAATACAATAAGTCATATAATACACCTGAGTCTACAACGTCAGGAGGTTTATAAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||