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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9030 cluster # 9030       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9030#0 length = 998 sequences # 8  

consensusID : consensus_9030#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 998
fasta sequence
                              [TTAGCCTGAAGAGTTTCTGCTTTTCCTAATTCTGTCTTAGATTCCTCCACTGTTAAAATAGCAATTTTCGCCTTTTCTGACTTGACTGGAATCGAAATCCCCAACCAATCAACTTCACTAACTTGACTAGCTTGCTTGGATCGAGCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAATTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGAAGTAAAACATCATAGATCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTCTGTAATTCG-AAGAATAAAATTCCACGAATCCACTGCTTGTATGCCCGCAATTCCAGTTTAGTTTGTGCATCTAATAAGGACAAATCATCCTCCATACTACACAAAAGTTCGGCACGTGCAACAGCTTTACGAAGTCGAGAACACATCTGGAAACGCTTGCGAATTTCAGTGCTTGATTCAGCCTTCAATTGCATAGCATATGCCCACGATCGTTC-ATTTCAAAGATTGCTAAAATGATGAAGCGTGGATCTGTCACAATATCCGGAGTTAACTTTTTAGGGACAACCTTTGATCGATTCCCTTGCTGAAAATGTAGTGATTTCCTCATTCTCCTGAGTTTTCGGGAAATATACTGATGATAGCGTTGATAATCACCATGACGTAAACCATGTTGTTGCTGAGCTGACTTAACAAGCGACAGCACGGGGATACTTGACGGTGTTATAGTAGTGTTTTCTGTAGTTTCCATTCAAAAACGTATGATGGTTTAGTAAGGAATAAGCGACTATCTTTAACAGAAACAACTTTAGTTGTGAGAACTTTCCAAAATACAATAAGTCATATAATACACCTGAGTCTACAACGTCAGGAGGTTTATAAAT]

[-] EMBL CD136726             [TTAGCCTGAAGAGTTTCTGCTTTTCCTAATTCTGTCTTAGATTCCTCCACTGTTAAAATAGCAATTTTCGCCTTTTCTGACTTGACTGGAATCGAAATCCCCAACCAATCAACTTCACTAACTTGACTAGCTTGCTTGGATCGAGCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAATTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGGAGTAAAACATCATAGATCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD136821             [TTAGCCTGAAGAGTTTCTGCTTTTTCTAATTCTGTCTTAGATTCCTCCACTGTTAAAATAGCAATTTTCGCCTTTTCTGACATGACTGGAATCGAAATCCCCAACCAATCAACTTCACTAACTTGACTAGCTTGCTTGGATCGAGCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAATTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGAAGTAAAACATCATAGACCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTCTGTAATTCGTATGAAggc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD153191             [                                                                 TTTCGCCTTTTCTGACTTGACTGGAATCGAAATCCCCAACCAATCAACTTCACTAACTTGACTAGCTTGCTTGGATCGAGCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAATTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGAAGTAAAACATCATAGATCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTCTGTAATTCG AAGAATAAAATTCCACGAATCCACTGCTTGTATGCCCGCAATTCCAGTTTAGTTTGTGCATCTAATAAGGACAAATCATCCTCCATACTACACAAAAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD121334             [                                                                                                                                                GCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGATAATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTTTCATCCCCAATCGAATGAGCACAATATCGAGTTTGAGGTAAAAGATCATCAATTCGGGATTTATAAACAGCTTGGCTGTCTTCATCTACCATTTGAAGTAAAACATCATAGATCGCTTGAGCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTCTGTAATTCG AAGAATAAAATTCCACGAATCCACTGCTTGTATGCCCGCAATTCCAGTTTAGTTTGTGCATCTAATAAGGACAAATCATCCTCCATACTACACAAAAGTTCGGCACGTGCAACAGCTTTACGAAGTCGAGAACACATCTGGAAACGCTTGCGAATTTCAGTGCTTGATTCAGCCTTCAATTGCATAGCATATGCCCACGATCGTTC ATTTCAAA                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD121392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCTGGAAACGCTTGCGAATTTCAGTGCTTGATTCAGCCTTCAATCGCATAGCATATGCCCACGATCGTTCAATTTCAAAGATTGCTAAAATGATGAAGCGTGGATCTGTCACAATATCCGGAGTTAACTTTTTAGGGACAACCTTTGATCGATTCCCTTGCTGAAAATGTAGTGATTTCCTCATTCTCCTGAGTTTTCGGGAAATATACTGATGATAGCGTTGATAATCACCATGACGTAAACCATGTTGTTGCTGAGCTGACTTAACAAGCGACAGCACGGGGATACTTGACGGTGTTATAGTAGTGTTTTCTGTAGTTTCCATTCAAAAACGTATGATGGTTTAGTAAGGAATAAGCGACTATCTTTAACAGAAACAACTTTAGTTGTGAGAACTTTCCAAAATACAATAAGTCATATAATACACCTGAGTCTACAACGTCAGGAGGTTTATAAAT]
[-] EMBL CD067365             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCAAAGATTGCTAAAATGATGAAGCGTGGATCTGTCACAATATCCGGAGTTAACTTTTTAGGGACAA CTTTGATCGATTCCCTTGCTGAAAATGTAGTGATTTC                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD062987             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            acccTGCTAAAATGATGAAGCGTGGATCTGTCACAATATCCGGAGTTAACTTTTTAGGGACAACCTTTGATCGATTCCCTTGCTGAAAATGT                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD098015             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATTTCCTCATTCTCCTGAGTTTTCGGGAAATATACTGATGATAGCGTTGATAATCACCATGACGTAAACCATGTTGTTGCTGAGCTGACTTAACAAGCGACAGCACGGGGATACTTGACGGTGTTATAGTAGTGTTTTCTGAAGTTTCCATTCAAAAACGTATGATGGTTTAGTAAGGAATAAGCGACTATCTTTAACAGAAACAACTTTAGTTGTGAGAACTTTCCAAAATACAATAAGTCATATAATACACCTGAGTCTACAACGTCAGGAGGTTTATAAA ]


>consensus_9030#0 TTAGCCTGAAGAGTTTCTGCTTTTCCTAATTCTGTCTTAGATTCCTCCACTGTTAAAATA GCAATTTTCGCCTTTTCTGACTTGACTGGAATCGAAATCCCCAACCAATCAACTTCACTA ACTTGACTAGCTTGCTTGGATCGAGCTTGACCAAGAAGTTGATCTAACTGAAGTTCTGAT AATAGAGTTAAACCATCAGGTGCTTGATTGCGCATGCGTTGTAAATCTGTAGCTGCTGTT TCATCCCCAATCGAATGAGCACAATATCGAATTTGAGGTAAAAGATCATCAATTCGGGAT TTATAAACAGCTTGGCTGTCTTCATCTACCATTTGAAGTAAAACATCATAGATCGCTTGA GCTGATTCTAAATGTTCCTTGGCCACAGCCCAATTCTGTAATTCGAAGAATAAAATTCCA CGAATCCACTGCTTGTATGCCCGCAATTCCAGTTTAGTTTGTGCATCTAATAAGGACAAA TCATCCTCCATACTACACAAAAGTTCGGCACGTGCAACAGCTTTACGAAGTCGAGAACAC ATCTGGAAACGCTTGCGAATTTCAGTGCTTGATTCAGCCTTCAATTGCATAGCATATGCC CACGATCGTTCATTTCAAAGATTGCTAAAATGATGAAGCGTGGATCTGTCACAATATCCG GAGTTAACTTTTTAGGGACAACCTTTGATCGATTCCCTTGCTGAAAATGTAGTGATTTCC TCATTCTCCTGAGTTTTCGGGAAATATACTGATGATAGCGTTGATAATCACCATGACGTA AACCATGTTGTTGCTGAGCTGACTTAACAAGCGACAGCACGGGGATACTTGACGGTGTTA TAGTAGTGTTTTCTGTAGTTTCCATTCAAAAACGTATGATGGTTTAGTAAGGAATAAGCG ACTATCTTTAACAGAAACAACTTTAGTTGTGAGAACTTTCCAAAATACAATAAGTCATAT AATACACCTGAGTCTACAACGTCAGGAGGTTTATAAAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)