Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9035 cluster # 9035       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9035#0 length = 604 sequences # 8  

consensusID : consensus_9035#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 604
fasta sequence
                              [GTCAACGTATATACATAACATTAAATGCGAGTGGACCGAATTCACATCAACATCCTTTGTTTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTAGGTGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTGGGAGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGG-ACACAGAAACGGATCATTG-AGTG-GAATGTCCGGTCAAAATGGTC-ACGTTATATATATAACTGTGAA-TGCAAGTAGACCGATTTCACATAACTATCAATATTTTCCAACACGATTATCTGGACGAAGATATAGATCATTGAGTAGAATGTCCGGTGAAAATGGTCAAGATATATACATAACTGTGAATGCAGATGGATCGGGTTCATATCGTAATCGATATTTTCCATCACGATTTTATGGACGAAGATACGGTTCAATGAGTAGTCGCTCTGGTGACAACGGTCA]

[-] EMBL CD126954             [GTCAACGTATATACATAACATTAAATGCGAGTGGACCGAATTCACATCAGCATCCTTTGTTTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTAGGTGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTTTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTAGGTGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACAGAATTCACATCAGCATCCTTTGTTTCCCTCCACATTATGTGGCACACAGAAACGGATCATTGTAGTGCGAATGTTAGGTGGAAGTGGTCAACG TATATACATAGCATTAAAGTGCAAGTGGA                                                                                                                                                                                                                 ]
[+] EMBL CD126403             [             CATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTTTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTAGGTGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTGGGAGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGG ACACAGAAACGGATCATTG AGTG GAATGTCCGGTCAAAATGGTC ACGTTATATATATAACTGTGAA TGCAAGTAGACCGATTTCACATAACTATCAATATTTTCCAACACGATTATCTGGACGAAGATATAGATCATTGAGTAGAATGTCCGGTGAAAATGGTCAAGATATATACATAACTGTGAATGCAGATGGATCGGGTTCATATCGTAATCGATATTTTCCATCACGATTTTATGGACGAAGATACGGTTCAATGAGTAGTCGCT                ]
[-] EMBL CD126292             [                                             ATCAACATCCTNTGTTTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTAGGTGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAGTTCACATCAACATCCTTTGTTTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTGGGAGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGG ACACAGAAACGGATCATTG AGTG GAATGTCCGGTCAAAATGGTC ACGTTATATATATAACTGTGAA TGCAAGTAGACCGATTTCACATAACTATCAATATTTTCCAACACGATTATCTGGACGAAGATATAGATCATTGAGTAGAATGTCCGGTGAAAATGGTCAAGATATATACATAACTGTGAATGCAGATGGATCGGGTTCATATCGCAATCGATATTTTCCATCACGATTTTATGGACGAAGATACGGTTCAATGAGTAGTCGCTC               ]
[-] EMBL CD126436             [                                                AACATCCTTTGTTTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTAGGTGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD126316             [                                                                           CTGGACACAGAAGCGGATCATTGAGTGGAATGTTAGGTGAAGGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTGGGAGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGG ACACAGAAACGGATCATTG AGTG GAATGTCCGGTCAAAATGGTC ACGTTATATATATAACTGTGAA TGCAAGTAGACCGATTTCACATAACTATCAATATTTTCCAACACGATTATCTGGACGAAGATATAGATCATTGAGTAGAATGTCCGGTGAAAATGGTCAAGATATATACATAACTGTGAATGCAGATGGATCGGGTTCATATCGTAGTCGATATTTTCCATCACGATTTTATGGACGAAGATACGGTTCAATGAGTAGTCGCTC               ]
[-] EMBL CD126425             [                                                                                               acccGTGGAATGTTAGGTGAAAGTGGTCAACGTATATACATAACATTAAATGCAGGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTT                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD126348             [                                                                                                                                                                       CAACATCCTTTGTCTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTAGGTGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGG ACACAGAAACGGATCATTG AGTG GAATGTCCGGTCAAAATGGTC ACGTTATATATATAACTGTGAA TGCAAGTAGACCGATTTCACATAACTATCAATATTTTCCAACACGATTATCTGGACGAAGATATAGATCATTGGGTAGAATGTCCGGgggt                                                                                                                                ]
[-] EMBL CD063748             [                                                                                                                                                                        AACATCCTTTGTCTCCCCCCACATGATCTGGACACAGAAACGGATCATTGAGTGGAATGTTGGGAGAAAGTGGTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGTCTCCCCCCACATTATCTGG ACACAGAAACGGATCATTG AGTG GAATGTCCGGTCAAAATGGTC ACGTTATATATATAACTGTGAA TGCAAGTAGACCGATTTCACATAACTATCAATATTTTCCAACACGATTATCTGGACGAAGATATAGATCATTGAGTAGAATGTCCGGTGAAAATGGTCAAGATATATACATAACTGTGAATGCAGATGGATCGGGTTCATATCGTAATCGATATTTTCCATCACGATTTTATGGACGAAGATACGGTTCAATGAGTAGTCGCTCTGGTGACAACGGTCA]


>consensus_9035#0 GTCAACGTATATACATAACATTAAATGCGAGTGGACCGAATTCACATCAACATCCTTTGT TTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTAGGTGAAAGTG GTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGT CTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTTGGGAGAAAGTG GTCAACGTATATACATAACATTAAATGCAAGTGGACCGAATTCACATCAACATCCTTTGT CTCCCCCCACATTATCTGGACACAGAAACGGATCATTGAGTGGAATGTCCGGTCAAAATG GTCACGTTATATATATAACTGTGAATGCAAGTAGACCGATTTCACATAACTATCAATATT TTCCAACACGATTATCTGGACGAAGATATAGATCATTGAGTAGAATGTCCGGTGAAAATG GTCAAGATATATACATAACTGTGAATGCAGATGGATCGGGTTCATATCGTAATCGATATT TTCCATCACGATTTTATGGACGAAGATACGGTTCAATGAGTAGTCGCTCTGGTGACAACG GTCA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)