cluster # 9116

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Schistosoma mansoni
cluster # 9116 cluster # 9116 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9116#0 length = 662 sequences # 8
consensusID : consensus_9116#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 662
fasta sequence
                              [TTTGTTAAAGAGTATTATTGCTAAAAATGCTCAAGTAACTAGAAGAAAAATA-TCCAGGGGACAAAAGTTGGTACACAACTAGTAAGGTAGAA-CAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAAGCCACAGGTAATATGATATAAACTACTACATGGACTTAGTTTGTTTT-AACATGATAAACCAACAAATACGCCGAATAAATGTTTGCATACGCAGATATGTTCTAAATCCAAGTGATACAAGAGAAATGAGGGTT-CCCTGACTATTGAGTTTACTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTATCAACGGCTCCAATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGCANAA]

[+] EMBL AA999405             [TTTGTTAAAGAGTATTATTGCTAAAAATGCTCAAGTAACTAGAAGAAAAATA TCCAGGGGACAAAAGTTGGTACACAACTAGTAAGGTAGAA CAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAACCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL AA559635             [                ATTGCTAAAAATGCTCAAGTAACTAGAAGAAAAATATTCCAGGGGACAAAAGTTGGTACACAACTAGTAAGGTAGAACCAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAAGCCACAGGTAATATGATATAAACTACTACATGGACTTAGTTTGTTTTAAACATGATAAACCAACAAATACGCCGAATAAATGTTTGCATATGCAGATATGTTCTAAATCCAAGTGATACAAGAGAAATGAGGGTTNCCCTGACTATTGAGCTTA                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD134272             [                                                   A TCCACGGGACAATAGTTGATACACAACTAGTAAGGTAGAA CAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAAGCCACAGGTAATATGATATAAACTACTACATGGACTTAGTTTGTTTT AACATGATAAACCAACAAATACGCCGAATAAATGTTTGCATACGCAGATATGTTCTAAATCCAAGTGATACAAGAGAAATGAGGGTT CCCTGACTATTGAGTTTACTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGA                                                                                                                                                                                                                                                       ]
[+] EMBL CD189744             [                                                                    TTGATACACAACTAGTAAGGTAGAA CAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAAGCCACAGGTAATATGATATAAACTACTACATGGACTTAGTTTGTTTT AACATGATAAACCAACAAATACGCCGAATAAATGTTTGCATACGCAGATATGTTCTAAATCCAAGTGATACAAGAGAAATGAGGGTT CCCTGACTATTGAGTTTACTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTATCAACGGCTCCAATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGCANAA]
[+] EMBL CD097987             [                                                                                                                                                                                                                                                                                                    CTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTATCAACGGCTCCCATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGC    ]
[+] EMBL CD098139             [                                                                                                                                                                                                                                                                                                    CTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTATCAACGGCTCCAATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGC    ]
[+] EMBL CD145100             [                                                                                                                                                                                                                                                                                                         TTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTAT                                                              ]
[-] EMBL CD136483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAGTCGAGCAGGAACCTTTTTATCAACGGCTCCAATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGCA   ]




>consensus_9116#0
TTTGTTAAAGAGTATTATTGCTAAAAATGCTCAAGTAACTAGAAGAAAAATATCCAGGGG
ACAAAAGTTGGTACACAACTAGTAAGGTAGAACAAAAAATTTAAAATCAGTACATTTTGG
AAATAACTGTGACAAAGCCACAGGTAATATGATATAAACTACTACATGGACTTAGTTTGT
TTTAACATGATAAACCAACAAATACGCCGAATAAATGTTTGCATACGCAGATATGTTCTA
AATCCAAGTGATACAAGAGAAATGAGGGTTCCCTGACTATTGAGTTTACTGTTTTCTATT
TGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGG
CGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATA
TGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGT
TAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATA
TGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTAT
CAACGGCTCCAATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGCAN
AA
clustalw multiple alignements is not computed in this case